Afon011406.1
Basic Information
- Insect
- Anopheles fontenillei
- Gene Symbol
- -
- Assembly
- GCA_008817895.1
- Location
- VTWG01001248.1:1-2243[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-18 1.6e-14 53.0 0.0 2 45 166 210 165 210 0.95
Sequence Information
- Coding Sequence
- GGCGCAACGGGCGGCGGGGCCAGTGCCGGCAGTGGCGGCAATAACGGTGGGCTCGCGGGGGCCTCCGCCACCAACTCGAACGCGACGACGCCGCAACCGACGACGCCGGTGCAGATCTATCAGCATCCCTTCTCGCCCCAGATCATCTCGGTCAATCCGAACAGCATGGTCAACAGCTACCAGTCGTCGAACCTGTCCACCCCGACCTCCCCGCAGGCCGGCAGCGATCAAACGGCCGGGCTGGTGTACAGTACCGGCACGCCGAATCAGTCCCCGCTCGGCACCACGACGGCCACCGCATCCGGCACGAACGCGAGCGGGAACGGCGGCAACGGGGCGGCGGCCGCGGCCGGTGGCAACGGAGCGGCGGGCGGCAACGGTGCGGGCGCAGGGACGGCGGGCAGTGGAGCTGGGGCAGCGGGGGGTGCGGCGGGTGCGGCCGGCGCGACCGTGCAGCAGCCGGTCAAGCGGAAACGGTCCGTCAACCCGCAGGGCGACGAGAACTTCCTGCGCGCGCTCGAGGCGGTCCGCTTCGGTGGCATCGGGTTCTGCAAAGCCGCCCGGCTGTACGGCGTGAACAATCGCACGCTCTGGTTGGAGTACAAGAAGCGAGGCTACCCGATCAGCCGGCCGAGCATCAAGAATCGCATCAAGCTGGAACCGAACATATCACCGCCGCCGACGGCTACGACACCACCGGGCGACGAGAACGCCTCGCTGGAGCACTACGATACGGCCCTTTCCTCACCTGCCCTCAATATGtccctgcagcagcagcagcagcagcaacagcagcagcagcaacagcagcaggtacagcaacagcatcaaaccaaccaacagcagcaagtcaccgcggcacagcagcagcaaacacaacagcaccagcagcagcaacaacagcagcagggcaCCGATACGACGAatgctgcggcggcggcggcagcggctgcCGTGGTGGCTGCCTCGTCCACCCCGCTCATGTGCCCACCGCACGGGCATACGATGGGCGTGATGGGCTTTCTCGATACCCGCCATGTCGATTTTACGACCACCGCCAGCCTGCACCAGATGTCCCGGCAGCGCTACCCGGACACGGCGACCGTCAACATGAACACGGGCGCCGTCAACCTGCAGGGGCTGAACTTTAACTCGATGTAA
- Protein Sequence
- GATGGGASAGSGGNNGGLAGASATNSNATTPQPTTPVQIYQHPFSPQIISVNPNSMVNSYQSSNLSTPTSPQAGSDQTAGLVYSTGTPNQSPLGTTTATASGTNASGNGGNGAAAAAGGNGAAGGNGAGAGTAGSGAGAAGGAAGAAGATVQQPVKRKRSVNPQGDENFLRALEAVRFGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNISPPPTATTPPGDENASLEHYDTALSSPALNMSLQQQQQQQQQQQQQQQVQQQHQTNQQQQVTAAQQQQTQQHQQQQQQQQGTDTTNAAAAAAAAAVVAASSTPLMCPPHGHTMGVMGFLDTRHVDFTTTASLHQMSRQRYPDTATVNMNTGAVNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00097703; iTF_00096301; iTF_00109057; iTF_00095024; iTF_00103602; iTF_00093983;
- 90% Identity
- iTF_00095024;
- 80% Identity
- -