Afon012514.1
Basic Information
- Insect
- Anopheles fontenillei
- Gene Symbol
- bab1
- Assembly
- GCA_008817895.1
- Location
- VTWG01008394.1:38268-41226[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.3e-18 1.7e-14 52.9 0.0 1 43 27 70 27 72 0.95
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACAGCCAGAACCTGATCCACCATCTGCGCTTTCGCGAGCGCGGCCCGCTAAAGTCCTGGCGCCCGGAAACGATGGCCGAAGCGATCTTCAGCGTGCTGAAGGAGGGCCTGTCGCTGTCGCAGGCGGCCCGCAAGTACGACATCCCCTACCCGACGTTCGTGCTGTACGCGAACCGGGTGCACAACATGCTCGGACCGTCGATCGACGGCGGTACGGATCTGCGGCCGAAGGGTCGCGGTCGACCGCAGCGCATACTGCTCGGCATCTGGCCGGACGACCACATCAAGGGCGTCATCAAGAGTGTCgtctttcgcgatgccaaagAGATGAAGGAGGAGCCGATGATGTACGGCCGACACTCTCCTTTTCCCTTTCAAGACAACCCCCTGAGCTACGGACCGACCGCACCGAACGGTCAGCTACCCTCCGTGGCGACCGGCACCAACGTCCCGGACGGCATGTCGCAGGACGCCCTGACAGCCGCCACCGTGGCCGCCGTCCGCCAGCAGATGTGCAATATGGTGGCGGCCGCCCAGCACCACCCGGACGCCGCCAATCTCGTGGCGGCGGCCGGCTTCAACCTACCGTCCCACTGTGGCACACCGCCCAACCTGAGCATGCAtccggcagcggcagcggccgccgccgccgcagccgccgcctcGAACGCATCCGCCGCCGGTGGACCGAGCGGgggaggcggcggcggtggctcGAGCGGTGCCATCCCGCTCCCGAAGATGGGCTCACCGGCCGTCCCATCGACCGGGCACGGTAACAACAATGGCGGCTCGGGCGCCGGCATTCAGATGCCGCGCCTGGGTTCGCCCGCCGGTTCGAGCGGGCTGGCGAAGGAGCACGAGCTGCAGCAtcacggcggcggcggcggagggCTCGGTGGTGGATCTGGGGGCGGTATGTCCCGGGCGACACCGCCCGGTGCCCGGGACCGTGCGATGACGGCCCGCTCCAATCTGGCCGCCGGCGAGACGggccgcagcagcagttccGCCGGCAGCATCCATCGATCGTCCCCTTCCAGCAGTGCCGGCTCGTCCCTGAACCACCAGCACCCGGCCCATCTGTCCCATccgcaccatcagcagcagcatcaccaccagcatcagcaccaccaccagccgcaCCACGGACATGCGCACCATCTGCCGCACCACAACCCGCTGTCCCATCTGGTGGGTTCGGGCGGCGCGTCGGGCGCCCTCAGCATAACGAAGCTCGGTTCGCCCGGCTCGGCACACGACCTACGCATCAGCAACAGCCCCGACGAGAGCCCGCTCGCCTCCCCGATCGGGCTGGCGATGGAACCGGCCGTCAATCTGGCGCTCGGGGCCGGCGGCTCCCAGCCCGCGCACGAGGATGTGCGGCTGCACGTGCCGCCCCCGTACGGCAGCAAACCACCGTCCCGGGGCGGCGGAGCACCGTCCACCGGCTACACCAGCAACTCGTCCCCACCGCGACCCGAGCACCTGTTCCAGGACCAGGACATTGCGGCGCTGGTAGCGACGACGCGGGCCGCCTGCCCACCGTCCCGCGTGCCCGACTACAAGGACACGGCGGTACGGCCGACGGCCTCCATCAAGGTGGAACCGCTGACCGAGTGTCGGGGCGATTAA
- Protein Sequence
- MWQKCWNSQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDDHIKGVIKSVVFRDAKEMKEEPMMYGRHSPFPFQDNPLSYGPTAPNGQLPSVATGTNVPDGMSQDALTAATVAAVRQQMCNMVAAAQHHPDAANLVAAAGFNLPSHCGTPPNLSMHPAAAAAAAAAAAASNASAAGGPSGGGGGGGSSGAIPLPKMGSPAVPSTGHGNNNGGSGAGIQMPRLGSPAGSSGLAKEHELQHHGGGGGGLGGGSGGGMSRATPPGARDRAMTARSNLAAGETGRSSSSAGSIHRSSPSSSAGSSLNHQHPAHLSHPHHQQQHHHQHQHHHQPHHGHAHHLPHHNPLSHLVGSGGASGALSITKLGSPGSAHDLRISNSPDESPLASPIGLAMEPAVNLALGAGGSQPAHEDVRLHVPPPYGSKPPSRGGGAPSTGYTSNSSPPRPEHLFQDQDIAALVATTRAACPPSRVPDYKDTAVRPTASIKVEPLTECRGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00097704;
- 90% Identity
- iTF_00095583; iTF_00104304;
- 80% Identity
- -