Acul009776.1
Basic Information
- Insect
- Anopheles culicifacies
- Gene Symbol
- bab1
- Assembly
- GCA_000473375.1
- Location
- AXCM01015033:11-3898[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-18 1.6e-14 53.0 0.0 1 43 27 70 27 72 0.95 2 2 5.5 1.1e+04 -4.1 0.1 14 22 402 410 401 411 0.83
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACAGCCAGAACCTGATCCACCATCTGCGCTTTCGGGAGCGAGGTCCACTAAAATCCTGGCGCCCAGAAACGATGGCCGAAGCGATCTTTAGCGTGCTGAAGGAAGGACTGTCCCTGTCGCAGGCGGCCCGCAAGTACGACATCCCGTATCCAACGTTCGTCCTGTACGCGAACCGCGTCCACAACATGCTCGGACCGTCGATCGACGGTGGTACCGATCTGAGGCCGAAAGGACGTGGACGACCCCAGCGCATCCTGCTCGGCATCTGGCCCGACGAGCACATCAAGGGCGTGATCAAGAGTGTCGTCTTTCGCGATGCCAAAGAGATGAAGGAGGAGCCCATGATGTACGGAAGACACTCTCCTTTTCCCTTTCAAGACAACCCCCTGAGCTACGCACCGAATGCACCGAACGGTCAGCTGCCGGCCGCCACCGGTACGGTGCCGGACGGTATGTCCCAGGAAGCCCTAACAGCCGCCACCGTGGCGGCCGTCCGCCAGCAGATGTGTAACATGGTAGCCGCCGCCCAGCATCATCCGGATGCCGCCAATCTCGTGGCGGCCGGGTTCAACCTCCCGTCCCACTGTGGCACTCCACCGAATCTTAGCATCCATCCGgcggctacggctgcggctgcggccgctgctgcAGCAGCTGCCGCCTCCAACACCGGGAATGGACCGAACGCGGGTGGCGGTTCCAGCGGTGCCATTCCCTTGCCGAAGATGGGCTCACCGGCCGTTCCCTCTACCGGGCACGGTAACAACAATGGCGGTTCGGGTGGGATACAGATGCCACGGTTAGGATCACCGGCCGGTTCGAGCGGGTTGGCGAAGGATCACGAGCTTCAGCACCAtggtggtggaggaggaggtcttggaggtggtggaggtacgggaggcggagcgggaggtggtATGTCCCGTGCTACACCTCCGGGTGCTCGAGATCGTGCACTGACGGCACGCTCCAACCTAACCGTCAGTGAATCGGGTCGCAGCAGTTCCACCGGTGGTAACGTGCACCGATCGTCACCTTCCAGCAGTACCGCTTCGTCCATCAaccatcaccatcagtcgcatctgccgcaccatcaccatcatccgcaccaccagtcacaccacGGACACGGGCATCATCTTCCGCACCACAATCCACTCTCGCATCTGGTAAGCTCCGGAGGTTCCGGAGGTCTCAGCATAACGAAGCTCGGATCACCCGGTTCGGCTCACGATCTACGCATCAGCAACAGCCCGGACGAGAGTCCGCTTGCATCGCCGATTGGGATGGTGTTGGAACCGGCCGTTAATCTAGCACTCGGCGCTGGCTCTCAACCGTCGGAGGATGTGCGGCTTCACGTTCCACCACCGTACGGCAGCAAACCTCCGTCTCGGGGTGGTGCGACCGGTTACACGAGCAATTCGTCCCCACCGCGACCGGAACACCTGTTCCAAGATCAGGACATTGCGGCCCTGGTAGCAACGTCACGCGCCTGTCCACCGTCGCGTGTACCCGACTACAAGGACAGCCCGGTAAGGCCACCGGCATCAATCAAGGTGGAACCGCTGACGGAGTGCCGAGGTGATTAG
- Protein Sequence
- MWQKCWNSQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKSVVFRDAKEMKEEPMMYGRHSPFPFQDNPLSYAPNAPNGQLPAATGTVPDGMSQEALTAATVAAVRQQMCNMVAAAQHHPDAANLVAAGFNLPSHCGTPPNLSIHPAATAAAAAAAAAAAASNTGNGPNAGGGSSGAIPLPKMGSPAVPSTGHGNNNGGSGGIQMPRLGSPAGSSGLAKDHELQHHGGGGGGLGGGGGTGGGAGGGMSRATPPGARDRALTARSNLTVSESGRSSSTGGNVHRSSPSSSTASSINHHHQSHLPHHHHHPHHQSHHGHGHHLPHHNPLSHLVSSGGSGGLSITKLGSPGSAHDLRISNSPDESPLASPIGMVLEPAVNLALGAGSQPSEDVRLHVPPPYGSKPPSRGGATGYTSNSSPPRPEHLFQDQDIAALVATSRACPPSRVPDYKDSPVRPPASIKVEPLTECRGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00103603; iTF_00099590; iTF_00100236; iTF_00095023; iTF_00104304; iTF_00100897; iTF_00095583;
- 90% Identity
- iTF_00103603;
- 80% Identity
- -