Adar003950.1
Basic Information
- Insect
- Anopheles darlingi
- Gene Symbol
- stc
- Assembly
- GCA_000211455.3
- Location
- scaffold:11500-15419[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.2 6e+03 -3.3 0.4 15 18 301 304 300 305 0.77 2 16 1.9 9.9e+03 -4.0 1.6 15 19 329 333 328 333 0.81 3 16 0.066 3.5e+02 0.6 0.4 4 10 362 368 361 368 0.95 4 16 1.4e-06 0.0075 15.5 17.1 1 19 374 391 374 391 0.97 5 16 7.9e-08 0.00041 19.6 12.5 1 19 427 445 427 445 0.97 6 16 3.4e-09 1.8e-05 23.9 14.9 1 18 485 502 485 503 0.98 7 16 1.5 7.9e+03 -3.7 0.7 5 10 533 538 533 538 0.93 8 16 2.5e-07 0.0013 17.9 15.4 1 19 544 566 544 566 0.89 9 16 0.011 60 3.0 6.8 1 11 606 616 606 617 0.94 10 16 0.59 3.1e+03 -2.4 1.0 4 10 621 627 620 627 0.90 11 16 5.6e-09 2.9e-05 23.2 18.6 1 18 633 650 633 651 0.98 12 16 1.3 6.9e+03 -3.5 1.1 6 10 680 684 679 685 0.55 13 16 2 1e+04 -4.6 9.2 10 18 698 707 687 708 0.78 14 16 0.00014 0.75 9.1 10.6 1 15 744 758 744 769 0.87 15 16 2.2e-05 0.12 11.7 13.4 4 19 778 795 776 795 0.91 16 16 0.21 1.1e+03 -1.0 1.1 7 12 810 815 804 815 0.70
Sequence Information
- Coding Sequence
- ATGGCAGCCAACTCGGATGCAAATTCTGGCGTCGGTCGGACCAGCGGCGGCAGCGGGGGCGGTGGTAGCAGCTTCGACGAGTTCATCTCGCAGTTCAACGCCAGGGTGCAGATTCAGCAGAGTCTGCAGCAGCTTCCCTGTTTCCAACCATCCCCAGCAGCACCACCCTCAtcgtcgtcgtcgtcgtcgGCGGCATCGGCGTACCAGTATTGTGGGATGACATCCAACCTCACACCGACGGCGGCCGAGTTTGTCCCGCGGAAGTACCAACAGAGCGGCACGACATCGGCAAGCTTCGAACAAAGCACCAACGGTGGACCATCGGAGGAGGACAATCGTGCGGATTACCCATCGACCAGCTACTACAGCTCGGGTGGTCGTCTGGCAGGCGGTGGTGGAAGTGGCCGTACGCGTCGTAACGAGAGCCTGAAGCCACGCAACGGTTGGCATATACGCGATGATCGACCGGTGGGTCGTGGCAAGTGGAAACAAAATCAAGCGATgcagcaccagcaccagcaccaacatcaacaacatcagcaggcaggcagtggacggttaaggggtggaaacggcgtatacggagatggtgacgagatggagacgctggaggatgtggtggcgccaaaccgtcgaaacatcggcgttggtcgtcagcggaatcaccaccatcagcagcagcagcagcagcagcatcatcacagccatggacaagagcaggagGCTGGGCGAACGAGAAAGCTTCCGGTCGGATCGAAGCAGGCAACGGAAGACAACGGCGGCTATACGCCCCTCTCGAAGTGTTCCCAGCGCGAAAAGCTAATGCGAGAGATCGAGTGCTACCGGTTGGAGTGTCTAGTATGCTGTGAGGTGGTGAAACCAACGAAACCCGTCTGGTCCTGCGGTAGCTGCTATCACATTTTGCACCTGGCGTGTGTTACGCGTTGGGCCACGAGCTCCCAGGCGGATGATGGTAGCTGGCGCTGTCCGGCCTGTCAGCACGTGTCGAAGGAAATTCCCCGGGATTATCTGTGTTTCTGTGGCAAGCTAAAGAACCCGACGTACAATCACAGCGATCTGGCGCACTCTTGCGGAGAGGTGTGCGGTCGGCGTGAACTCTGTGGTCACCCTTGTACGCTGCTCTGCCACCCGGGCCCATGTCCATCGTGCCAGGCGACGGTGCAACGGAAGTGTGGCTGTGGCCGGGTCGAGAAGTCCATGCAGTGCAGCCTGAAGGAGGATCTGGTGTGTGAGGCAACGTGTGATAAGCCACTGAATTGTGGTCTGCATCGCTGTGATAAACGGTGCCACCCGGGTGCGTGCGAAGAGTGTAAGGAACGGGTCCAGCACCGTTGTTACTGTGAACGGAACGAACGATCGGTGGCGTGTACGGAGGAGAATCGGCTCGTCGTACGGTACGGTTGCGAGGAGTCCTGCTCGAAGGTGCTTGGCTGCGGGAACCATCAATGTCAGCGGCTGTGTCATGGTGGGAACTGCGAACCGTGTGCCGATGCACCGGAACACGTGCTTAGCTGTCCGTGTGGCCGGCAACCGGTGGAACCGGGTAGTCGGACGTCCTGTTTGGATCCAATTCCTACCTGTACGGCGATTTGCGGCCGGAAGCTAAAGTGTGGCCCACCGGGAGCGAACCATGGCTGTGAGGCAACGTGCCACAAGGGTAACTGTCCACCGTGCAAAAAGTCTACCACCGTCAAGTGCCGCTGCGGAAACATGGACCAACCGATGAAGTGCAAGGAGCTGACGACGCGGGCCGATGATGCGCGGTGCAAGAAACGTTGCACCCGGAGGCGTAACTGTGCGAAGCATAAATGCAATCAGCTGTGCTGCATCGACATTGATCATATCTGTCCGAAGACATGCTCGTTACCGCTGTCCTGCGGACGGCATCGGTGTGACAAACCGTGTCACAAAGGAAACTGCCAGCCCTGCCATCGGGTTTCGTTCGATGAGCTGACCTGTGACTGTGGGGCCAATGTGATCTATCCGCCGGTGCCCTGTGGTACACGGAAACCCGCCTGCGATCGTCCCTGTCCACGGCGGCATGCTTGCGAACATGCGCCCCTACACAACTGCCACTCGGAAACGGATTGTCCACCGTGTGTCGTGCTGACGACCAAGTACTGCTACGGCAAGCACGAGCAACGGCGCACCATTCCGTGCTACCAGGAATCGTTTAGCTGCGGGATGCCCTGTGCACGGCCACTCGCTTGTGGACGCCACAAGTGCATTCGTGCTTGCCACGAGGACGTCTGTATGGCCGAGGGAACCGTCTGTAAGCAGAGCTGCGTGATTGAGCGCGAAAGCTGTGCCCATCCGTGCAATGCACCGTGCCACGAGGGCGAGTGTCCGGATGTACCGTGCCGTGTGTCGGTTGAGGTCACCTGTGAGTGTGGCAATCGGAAGCAGCAACGCACTTGTCACGAGTTTTCGAAGGAATACCGTCGGATCGCATCGATGCAGCTCGCTTCCTCGGTGCAGGAGATGCAACGCGGAGGATCGGTCGAGTTGAGTGACATTCTGGCACCGAAAGGCCGTCCAAAGAACAACAAAACGCTCGAGTGTAGCGAAGAGTGCCGAATGCTGGAACGGAATCGACGCCTAGCGATGGCCCTGCAAATCCGCAATCCGGATCTTCCGTCAAAGCTGCAGCCAAACTATTCCGAGTTTTTGCGCACTTACGCCAAGAAGGATATGGCGCTGGTGCAGATGATACACGAGAAGCTGACGGAGCTCGTGAAGCTGGCCAAGGAGAGCAAGCAGAAATCGCGTTCCCATTCGTTCCCGGTCATGAACCGGGAGAAGCGTCGGGTTGTGCATGAGATGTGTCACATGTTTGGCGTCGAATCGGTGGCCTATGATGCGGAACCGAATCGGAACATTGTTGCCACTGCGGATCGGTTTACGTCCTGGCTACCGAGCATGAGTCTGATGGAGGTGCTGCAGCGTGAGAATGGTCAGCGACGCATAATCGTCCCCAACCTGAATGCCTGGGGCCGTACGAGCCTTAACGCGAGCACCAGCAGCAAATAG
- Protein Sequence
- MAANSDANSGVGRTSGGSGGGGSSFDEFISQFNARVQIQQSLQQLPCFQPSPAAPPSSSSSSSAASAYQYCGMTSNLTPTAAEFVPRKYQQSGTTSASFEQSTNGGPSEEDNRADYPSTSYYSSGGRLAGGGGSGRTRRNESLKPRNGWHIRDDRPVGRGKWKQNQAMQHQHQHQHQQHQQAGSGRLRGGNGVYGDGDEMETLEDVVAPNRRNIGVGRQRNHHHQQQQQQQHHHSHGQEQEAGRTRKLPVGSKQATEDNGGYTPLSKCSQREKLMREIECYRLECLVCCEVVKPTKPVWSCGSCYHILHLACVTRWATSSQADDGSWRCPACQHVSKEIPRDYLCFCGKLKNPTYNHSDLAHSCGEVCGRRELCGHPCTLLCHPGPCPSCQATVQRKCGCGRVEKSMQCSLKEDLVCEATCDKPLNCGLHRCDKRCHPGACEECKERVQHRCYCERNERSVACTEENRLVVRYGCEESCSKVLGCGNHQCQRLCHGGNCEPCADAPEHVLSCPCGRQPVEPGSRTSCLDPIPTCTAICGRKLKCGPPGANHGCEATCHKGNCPPCKKSTTVKCRCGNMDQPMKCKELTTRADDARCKKRCTRRRNCAKHKCNQLCCIDIDHICPKTCSLPLSCGRHRCDKPCHKGNCQPCHRVSFDELTCDCGANVIYPPVPCGTRKPACDRPCPRRHACEHAPLHNCHSETDCPPCVVLTTKYCYGKHEQRRTIPCYQESFSCGMPCARPLACGRHKCIRACHEDVCMAEGTVCKQSCVIERESCAHPCNAPCHEGECPDVPCRVSVEVTCECGNRKQQRTCHEFSKEYRRIASMQLASSVQEMQRGGSVELSDILAPKGRPKNNKTLECSEECRMLERNRRLAMALQIRNPDLPSKLQPNYSEFLRTYAKKDMALVQMIHEKLTELVKLAKESKQKSRSHSFPVMNREKRRVVHEMCHMFGVESVAYDAEPNRNIVATADRFTSWLPSMSLMEVLQRENGQRRIIVPNLNAWGRTSLNASTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00092546;
- 90% Identity
- iTF_00093160;
- 80% Identity
- -