Aali007121.1
Basic Information
- Insect
- Anopheles albimanus
- Gene Symbol
- stc
- Assembly
- GCA_013758885.1
- Location
- NC:56956237-56960182[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.1 6.4e+03 -3.3 0.4 15 18 287 290 286 291 0.77 2 16 1.9 1e+04 -4.0 1.6 15 19 315 319 314 319 0.81 3 16 0.065 3.7e+02 0.6 0.4 4 10 348 354 347 354 0.95 4 16 1.4e-06 0.0079 15.5 17.1 1 19 360 377 360 377 0.97 5 16 7.7e-08 0.00043 19.6 12.5 1 19 413 431 413 431 0.97 6 16 3.3e-09 1.9e-05 23.9 14.9 1 18 471 488 471 489 0.98 7 16 1.5 8.4e+03 -3.7 0.7 5 10 519 524 519 524 0.93 8 16 3.3e-07 0.0019 17.6 16.3 1 19 530 552 530 552 0.89 9 16 0.011 63 3.1 6.8 1 11 592 602 592 603 0.94 10 16 0.58 3.2e+03 -2.4 1.0 4 10 607 613 606 613 0.90 11 16 5.5e-09 3.1e-05 23.3 18.6 1 18 619 636 619 637 0.98 12 16 1.3 7.3e+03 -3.5 1.1 6 10 666 670 665 671 0.55 13 16 2 1.1e+04 -4.6 9.2 10 18 684 693 673 694 0.85 14 16 0.0002 1.1 8.6 11.1 1 15 730 744 730 754 0.87 15 16 2.2e-05 0.12 11.7 13.4 4 19 764 781 762 781 0.91 16 16 0.21 1.2e+03 -1.0 1.1 7 12 796 801 790 801 0.70
Sequence Information
- Coding Sequence
- ATGGCAGCCAACTCGGATGCAAATCCGGTGTctggcgtcggtggcggcgggggtggtggtggtagcagctTCGACGAGTTTATCTCGCAGTTCAACGCGCGGGTGCAGATACAGCAGAGTCTGCAACAGCTTCCCTGTTTCcaaccatcggcaccatcatcatcgtctgcgTCTTCGGCGTATCAGTACTGTGGAGTGACATCGAACCTGACGCCGACGGCGGCCGAATTCGTCCCCCGGAAGTACCAGCAGAGTGGCGCTGGCACATCAAGCTTCGAGcaaagcgccagcagcaacggtggacCATCGGAGGAGGACAATCGTGCGGATTACCCATCGACTAGCTACTACAGCTCCGGTGGGCGTCtagcaggcggtggtggtagtgggcgTACGCGTCGGAACGAGAGCCTGAAGCCACGCAACGGTTGGCATATACGCGACGatcgaccggtcggtcggggcaagtggaaacaaaaccaagcgatgcagcagcaccagcatcaacaacaccatcatcaagcAGGCAGTGGACGGTTGCGCGGTGGTAACGGTGTGTACGGCGATGGGGATGAGATGGAGCCGTTGGAGGACGCGATCGCGCCAAACCGGCGTAACGTTGGCGCTGGTCGACAGCGGAATCACCATCATGGTCAGGGACCGGAGCAGGAGGCTGGGCGTGCGAGAAAGGCCCACCGCGAAGCAGCGGGATCGAAGCAGGCAACGGAAGAAAGCGGCGGATATACGCCCCTGTCCAAGTGTTCACAGCGCGAGAAGCTGATGCGAGAGATCGAGTGCTACCGGCTGGAGTGTCTAGTATGCTGTGAAGTGGTAAAACCGACCAAGTCCGTCTGGTCGTGCGGTAGCTGCTACCACATCCTGCACCTGGCGTGTGTTACGCGCTGGGCCACGAGCTCGCAGGCGGACGATGGTAGCTGGCGCTGTCCGGCCTGTCAGCACGTGTCGAAGGAGATTCCCCGGGATTATCTGTGTTTCTGTGGCAAGCTAAAGAACCCGACCTACAACCATACCGATCTGGCGCACTCGTGCGGTGAGGTGTGCGGTCGGCGCGAACTCTGCGGCCATCCCTGTACGCTGCTCTGTCACCCGGGGCCCTGCCCTTCGTGTCAGGCGACGGTACAGCGCAggtgtggctgtggccggGTCGAGAAGTCCATGCAGTGCAGCCTGAAGGAGGATCTGGTGTGTGAGGCCACGTGTGATAAGCCGCTGAACTGTGGCCTGCATCGCTGTGATAAACGGTGCCACCCGGGTGCGTGCGAAGAGTGCAAGGAGCGGGTACAGCACCGTTGTTACTgtgaacggaacgaacgatcggTGGCGTGCACGGAGGAGAACCGGCTCGTCGTGCGGTACGGCTGCGAGGAGGCCTGCGCGAAGCTGCTCGGCTGTGGGAaccaccagtgccagcggCTCTGCCACGGTGGGAACTGTGAACCGTGTGCCGATGCACCGGAACACGTCCTGAGCTGCCCGTGTGGTCGGCAACCGGTGGAACCGGGTAGCCGGACGTCCTGTCTCGATCCGATCCCTACCTGTACGGCGATCTGTGGCCGGAAGCTAAAGTGTGGCCCACCGGGAGCGAACCATGGCTGTGAGGCACCGTGCCACAAGGGTAACTGTCCACCGTGCAAGAAGTCTACCACCGTCAAGTGCCGCTGCGGCAACATGGACCAGCCGATGAAGTGCAAGGAGCTGACGACCCGGGCCGATGATGCGCGGTGCAAGAAGCGCTGCACCCGAAGGCGCAACTGTGCGAAGCACAAATGCAATCAGCTGTGCTGCATCGACATCGATCATATCTGTCCTAAGACGTGCTCGTTGCCGCTGTCCTGTGGACGGCATCGGTGTGACAAACCGTGTCACAAAGGAAACTGCCAGCCCTGCCATCGGGTTTCGTTCGACGAGCTCACCTGTGACTGCGGGGCCAACGTGATCTATCCACCGGTGCCCTGTGGTACGCGGAAGCCGGCCTGTGATCGGCCCTGTCCGCGGCGCCACGGGTGCGAACATGCACCGCTACACAACTGCCACTCGGAAGCGGATTGTCCACCCTGTGTCGTGCTGACGACCAAGTTCTGCTACGGAAAGCACGAGCAGCGGCGTACCATTCCGTGCTATCAGGAATCGTTTAGCTGCGGGATGCCCTGTGCACGGCCACTCGCTTGTGGGCGCCACAAGTGCATTCGTGCCTGCCACGAGGATGTGTGCATGGCCGAGGGAACGGTCTGTAAGCAGTGCTGTGTGATTGAGCGCGAGAGCTGTGCCCATCCGTGCAATGCACCGTGCCACGAGGGCGAGTGTCCGGATGTGCCGTGCCGGGTGCCGGTTGAGGTCACCTGCGAGTGTGGcaatcggaagcagcagcgcacgtgTCACGAGTTTTCGAAGGAATACCGTCGGATCGCATCGATGCAGCTCGCTTCGTCGGTACAGGAGATGCAGCGCGGTGGCTCCGTCGAGCTGAGTGACATCCTGGCACCGAAGGGCCGTccaaagaacaacaaaacGCTGGAGTGTAGCGAAGAGTGTCGGATGCTGGAACGGAATCGACGCCTCGCGATGGCCCTGCAGATCCGCAATCCGGATCTACCGTCGAAACTGCAGCCAAACTATTCCGAGTTTTTGCGTACGTACGCGAAGAAGGATATGGCGCTGGTGCAGATGATACACGAGAAGCTGACGGAGCTGGTGAAGTTGGCCAAGGAGAGCAAGCAAAAGTCGCGTTCCCATTCGTTCCCGGTCATGAATCGGGAGAAGCGCCGGGTGGTGCACGAGATGTGCCACATGTTTGGCGTTGAATCGGTGGCCTACGATgcggaaccgaaccggaacatTGTCGCAACTGCGGATCGGTTTACGTCCTGGTTACCGAGCATGAGTCTGATGGAGGTACTGCAGCGCGAGAATGGCCAGCGGCGCATAATCGTCCCCAACCTGAATGCCTGGGGCCGTACGAGCCTTAAcgcgagcaccagcaacaagtAG
- Protein Sequence
- MAANSDANPVSGVGGGGGGGGSSFDEFISQFNARVQIQQSLQQLPCFQPSAPSSSSASSAYQYCGVTSNLTPTAAEFVPRKYQQSGAGTSSFEQSASSNGGPSEEDNRADYPSTSYYSSGGRLAGGGGSGRTRRNESLKPRNGWHIRDDRPVGRGKWKQNQAMQQHQHQQHHHQAGSGRLRGGNGVYGDGDEMEPLEDAIAPNRRNVGAGRQRNHHHGQGPEQEAGRARKAHREAAGSKQATEESGGYTPLSKCSQREKLMREIECYRLECLVCCEVVKPTKSVWSCGSCYHILHLACVTRWATSSQADDGSWRCPACQHVSKEIPRDYLCFCGKLKNPTYNHTDLAHSCGEVCGRRELCGHPCTLLCHPGPCPSCQATVQRRCGCGRVEKSMQCSLKEDLVCEATCDKPLNCGLHRCDKRCHPGACEECKERVQHRCYCERNERSVACTEENRLVVRYGCEEACAKLLGCGNHQCQRLCHGGNCEPCADAPEHVLSCPCGRQPVEPGSRTSCLDPIPTCTAICGRKLKCGPPGANHGCEAPCHKGNCPPCKKSTTVKCRCGNMDQPMKCKELTTRADDARCKKRCTRRRNCAKHKCNQLCCIDIDHICPKTCSLPLSCGRHRCDKPCHKGNCQPCHRVSFDELTCDCGANVIYPPVPCGTRKPACDRPCPRRHGCEHAPLHNCHSEADCPPCVVLTTKFCYGKHEQRRTIPCYQESFSCGMPCARPLACGRHKCIRACHEDVCMAEGTVCKQCCVIERESCAHPCNAPCHEGECPDVPCRVPVEVTCECGNRKQQRTCHEFSKEYRRIASMQLASSVQEMQRGGSVELSDILAPKGRPKNNKTLECSEECRMLERNRRLAMALQIRNPDLPSKLQPNYSEFLRTYAKKDMALVQMIHEKLTELVKLAKESKQKSRSHSFPVMNREKRRVVHEMCHMFGVESVAYDAEPNRNIVATADRFTSWLPSMSLMEVLQRENGQRRIIVPNLNAWGRTSLNASTSNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00098704; iTF_00093160;
- 90% Identity
- iTF_00093160;
- 80% Identity
- -