Adar002951.1
Basic Information
- Insect
- Anopheles darlingi
- Gene Symbol
- lrrfip2
- Assembly
- GCA_000211455.3
- Location
- scaffold:15007-19810[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-54 1.3e-50 171.6 22.7 2 269 69 352 68 361 0.89 2 2 6.4e-05 0.67 8.4 0.2 219 255 358 394 349 408 0.81
Sequence Information
- Coding Sequence
- ATGGTGCAAATCAAGCAGAAGGTGGTACAGTGTGAGCCGTCGTCGACGGCGGCAGGGGTGGCGGTTGGCCGGTTTGCGGTGCTGCTGCAGAAGCAAAAGCAACAGCAACCGGCGGCCGGACCATCGCTGAGCGATTGTCTCGAGCGGGCCGAGTCCGGCCAACCGAGTCGGTTGGCGGTGAAGGGCGGTACCTGGCACTATGGTGAAGCGAGACTAGCGGCCGTACGGCAGGCCCGGGCCGAAGCACGCGAGATCCGGATGCTCGAGCTGGAGCGCAATCAACGgcagcagcagcagcagcagcagcaTGGAGCAGGCGGTGGAGAGGCCTCTGGCGTCCCTGGCGCACCTTCCGCCGCTGCTGCTGCAGCTGGCAATGCGGCACGCGGGACCAACGTAGCTGCGCCGTCGGCCGCCAACACGACGAGCGCTCGTATTGCACGTGCGGTCGCGCTGCTCAATACATGCACCACAATGCTGATCAACCACACGACGCTACCGGTCAGCGACAAGGGCGAGGCGATGCAAACCCTGTCGACCAACATGAAAGAGCTGAACGACTGTTTTAATGAAAGTATGATCAAAAAGGCGGAACTGGAAAACGAGAACACCGCCGTCAACTACCAGAACGAGCTGCTCCGGGATGAGCTGGACGAGACGCTGGAAAAACATTGCCAGCTGCAGCGGGAAAACCGGGAAAAGCTGAAGGAATGCACCGGCCTCAAGCGGGACCTCGAAAAGCTCCAGGAGGAGCTGCGGCTCGCGAATGGGCAGGTGCAGGAGCGGGACGCACTCATCACCCAGCACGGGCTGCTGATCGTGAGCATCGAGAACCAGGATGGGAGCGATGCCCGGCGGATGCTCCTGTCCGCGGAAAACAGTGAACTGTTGGGTTCCGTTTCGGGGTCACTAGATGCACGGCTGTCGAAGTTCGCGGAGGAGAAAGCGCGTTTGGAGGCTCAGCTGCAGGAGGCCCTGGCCGAGCTGAACACCATTAAAACCCAGAGGTCCCAGCCAGAAGAGATGCTGAACGAGAACGCTTTGCATGAGACCACCGAACGGCTGGTCGTCGGTGCACAGCGCGTTCGCCTGCGCCAGCTGGCCACCGAAAACGGAAGCCTCGCTAAACAGATCGTCCAGTTCCGGGACAAATTGGAAGCGGCCGAGCGAGCGGGACCGAAGGCTACCGAACGGGTGCTCCATGAGCCCACCGTAGCGCAGTTTTGGGACGAGTGCCACTGTCAGTAA
- Protein Sequence
- MVQIKQKVVQCEPSSTAAGVAVGRFAVLLQKQKQQQPAAGPSLSDCLERAESGQPSRLAVKGGTWHYGEARLAAVRQARAEAREIRMLELERNQRQQQQQQQHGAGGGEASGVPGAPSAAAAAAGNAARGTNVAAPSAANTTSARIARAVALLNTCTTMLINHTTLPVSDKGEAMQTLSTNMKELNDCFNESMIKKAELENENTAVNYQNELLRDELDETLEKHCQLQRENREKLKECTGLKRDLEKLQEELRLANGQVQERDALITQHGLLIVSIENQDGSDARRMLLSAENSELLGSVSGSLDARLSKFAEEKARLEAQLQEALAELNTIKTQRSQPEEMLNENALHETTERLVVGAQRVRLRQLATENGSLAKQIVQFRDKLEAAERAGPKATERVLHEPTVAQFWDECHCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -