Adar001779.1
Basic Information
- Insect
- Anopheles darlingi
- Gene Symbol
- PAXBP1
- Assembly
- GCA_000211455.3
- Location
- scaffold:40701-46172[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 5.5e+03 -4.1 0.0 68 94 697 723 683 727 0.81 2 2 4e-36 2.1e-32 112.1 0.0 2 271 753 977 752 979 0.94
Sequence Information
- Coding Sequence
- ATGTCGTTGTTCCGGAAACCCAAAAAACCAATCCAGCGGCGCGTTTTCAGTGGCTACGACGATGAGGACGAGGAGAACGCTGGCGGCACGGTGGTGTCGAAGGATGCTGCTGCTGCAAAGCACGGCAACGGCAACGGCACCACATCCCCCCAAACCGAGCAACCGACAACCGCCACCGCAGAACCGCTGAGCGCCGTGTCTCAGACCGCGACCGGAGGAACCACCGGGCCGACGGAACGCAAACGGAAAGAACATCGTTCTTCCGCTAGCGCtggtggtggtggtggtggtggtagtggcggtgCTACGGACCGTAGTGATAGCAAAGCGAACTCCACAAAAGCGAGCGCATCCGCATCGTCGAAAGCGAACTCGCTGACGACTACCGCTACGAAACACTCTTTACTTAGTTTCGATGATGAAGAGGAGGGCGAAGTGTTCCAAGTGAAGAAGTCCTCACACAGCAAGAAGGTGATGAAGTCGCTCGACAAGGAGCGACGCCGGAAGCGTCACCTCGAAAAGAGCAACGGAACAACCACAACAACAGCTGGAGcagcaacatcatcatcatcattatcatcatcaggaccaatctcgtcgtcatcatcaGCGATCCATGGCACTAGTGCGTTGGATGGTCCGGGAAACGGCCCACGGAACCGATTTTCTtcctcctctcctccctcctcGTCCTTGTCGCACGACAAGGGCAGTAATGATAAGATAAAAAGAGAAAAGTGTGACCATTCTAGCTCTAATATCCAAACAGAAATACGCACAGACGACTTTGTGCTGGTGGTCAAGAAATCGGATCCCGAGAATTTAATACTAAATGGTCGGGCCGCACTGTGCGCTGGACGGGATGATATGTCATCGGAAGACGAGGACACGCACGACGATGAATCGAGTGGACACCAGAAGGAACACCAACCGCACCATCGGTTCTCGAAGCCGCAGGATAACTTTAAGATGTGCCTCGAAAACGGTGTCATACCGGATGCGGCCATGATTCATGCGGCCCGCAAGCGACGCCAGAAGGCACGGGAACAGGGTGAATTCATTCCAGTCGAGGAACCGAAGGAGGACAAAAACAAGAAGCGAACGGTACAGGAAGACGGCGATGGAGACGGTTCGGATGAGGATGACGATCGGATCGATATGTCGGCCATAACCGGTGCCAAAGAGCGCGAGGAGCGCCGCGAGCAATTTAACGCCATCCAGCGTGAAGATTCGGATGCGGAAGATTCGGATATCGAAACCAAGGAGTGGGAAAACCAACAGATCCGCAAAGGTGTCACCGGTGCGCAGCTGGTGTCCGCACAGCAGGAATCCATTATCTCGCAGTACTTAATGCAAAGCAGTGGCCGACCGACTGGTAGCAGTGGCAATGGACACTTTAGCCAAACATTTCAAAACAATTCCAACCGTCGCGGCATACTGAACGAGCATAGCGCCTCGGGAGATGATGAAGATGGCACGCTGGCCGGATTGCGGTCACTGACGACGGCGGAACTGCTCGAGCAAGCGTACGCTACGACCAGCGTCGGGCTGGCTAAACGATTGGGACAAAGCAAACAAAGATCCACCGGCAGTGCCGCCTCGATGTCGTCCGCACCTTCAAAGGGAGGAAGCAACGAAACGAAACCAACCGGTCCCCGGATGCCTCAGCAAATCCTAACACAGCTAACCGAGCGGCATCGTGCGACGGTCGAGCTACACCAGAAGCACGCGGACGATATCGAACACATCACGAAGGAGATCAAGCTGCTGCAGATGGATCATCTGTCGTGCGAGCAGCGGGCACCGGTTGCGGCGGCCAAGTATCGTTTCTACCAGGAGTTCCGCTGCTACGTCACCGATCTGGTCGAGTGCCTGAACGAGAAGGTACCGCTCGTGGCGGCACTCGAGCAGCGTACGCTACAGCTAATGGGCCGCCACTCGGCGATGCTGATCGAACGGCGCCGGCAGGATGTGCGGGATCAGGCGAAAGAGATGGCCGATGCCTGCAAAACCACGGCCAAACGGTTACCGGATGATCCGGAGCGGATCCGTCGGGCGGCGGAACGTGAGGGACGTCGAACAAGGAGGCGACGGGATCGGGAGAAGAACGAAACCTCCGACAGCCACTACGACGGTATGTCGAGTGACGATGAGATTCCGGATATGGAGGCCGCTCGCTATCGGGCCGCCCTACAGTCAGCCGAGCTGGAAGCGCGTGACATCTTCTCGGACGCGGCCGAAGCGTACGGTGAGATCGAGGGCATTCTCGGGAAGTTCGAGCACTGGCGGGATCATGATATGCCCGCGTATCGAGATGCCTACGTTAGCCTGTGTCTACCGAAGATTGTCGGACCGCTGATCCGGTTACAGCACATCACGTGGAATCCACTGGTCCCAGCGGGGCTGGACTCCAATGCCGCCGGTGGCGGTGGAGGCGCCACTGTGTCCGACTTCGAGCACGAAGAGTGGTTCCGTGCGGTGGCCCTGTACGGTTGTCGATCGGATAGTCCAAGTGAAGCCGAGCTGAATGACGATCCCGACGTACGGCTGCTACCGACGATCGTTGAGAAGATCTTCCTGCCCAAGCTGACGGCCCTGTGCGAACAGTACTGGGATCCACTGTCGACGACACAAACGCTCCGTCTTGTGCGTTTGCTGAAGCGCCTCGTCCGGGATTATCCGTCGCTTCGGCTTACCTGCAAACCGCTGCGCGCCCTCTTCCAGGCGATACTGGACAAATTGAAGCAGTCCGTCGACAACGATGTCTTCATTCCGATCTTCCCCAAGCAAGCCCAGGAAGCGAAATCGTCCTTCTTCCAGCGACAGTTCTGCAGCGGGTTGAAGCTGTTCCGCAACATCACCAGCTGGCAGGGCATACTGGCCGACGGTGCGCTCAAGGAGCTCGCCATCGGTTCACTGCTGAATCGCTACCTGCTGAACGGTATGCGTGTCTGCACCGCACCGGACGCCATCGGGAAGGCGTCCACGATCGTCTATACGTTGCCACGCGTGTGGCTTGCGGCCGGTTCACCGGTCGTCCAAAGCATGGACCAGTTCGTGACCATGCTGCGCCACCTGGAATCTCAGCTCGAACCGGCGGCAGCGATAAATGGGGAACTGATCGAGCAAATACGAAAGATATTGAGCAGCCTGCACGTACTGTCGGCGTAA
- Protein Sequence
- MSLFRKPKKPIQRRVFSGYDDEDEENAGGTVVSKDAAAAKHGNGNGTTSPQTEQPTTATAEPLSAVSQTATGGTTGPTERKRKEHRSSASAGGGGGGGSGGATDRSDSKANSTKASASASSKANSLTTTATKHSLLSFDDEEEGEVFQVKKSSHSKKVMKSLDKERRRKRHLEKSNGTTTTTAGAATSSSSLSSSGPISSSSSAIHGTSALDGPGNGPRNRFSSSSPPSSSLSHDKGSNDKIKREKCDHSSSNIQTEIRTDDFVLVVKKSDPENLILNGRAALCAGRDDMSSEDEDTHDDESSGHQKEHQPHHRFSKPQDNFKMCLENGVIPDAAMIHAARKRRQKAREQGEFIPVEEPKEDKNKKRTVQEDGDGDGSDEDDDRIDMSAITGAKEREERREQFNAIQREDSDAEDSDIETKEWENQQIRKGVTGAQLVSAQQESIISQYLMQSSGRPTGSSGNGHFSQTFQNNSNRRGILNEHSASGDDEDGTLAGLRSLTTAELLEQAYATTSVGLAKRLGQSKQRSTGSAASMSSAPSKGGSNETKPTGPRMPQQILTQLTERHRATVELHQKHADDIEHITKEIKLLQMDHLSCEQRAPVAAAKYRFYQEFRCYVTDLVECLNEKVPLVAALEQRTLQLMGRHSAMLIERRRQDVRDQAKEMADACKTTAKRLPDDPERIRRAAEREGRRTRRRRDREKNETSDSHYDGMSSDDEIPDMEAARYRAALQSAELEARDIFSDAAEAYGEIEGILGKFEHWRDHDMPAYRDAYVSLCLPKIVGPLIRLQHITWNPLVPAGLDSNAAGGGGGATVSDFEHEEWFRAVALYGCRSDSPSEAELNDDPDVRLLPTIVEKIFLPKLTALCEQYWDPLSTTQTLRLVRLLKRLVRDYPSLRLTCKPLRALFQAILDKLKQSVDNDVFIPIFPKQAQEAKSSFFQRQFCSGLKLFRNITSWQGILADGALKELAIGSLLNRYLLNGMRVCTAPDAIGKASTIVYTLPRVWLAAGSPVVQSMDQFVTMLRHLESQLEPAAAINGELIEQIRKILSSLHVLSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00092813;
- 90% Identity
- iTF_00092813;
- 80% Identity
- -