Adar005711.1
Basic Information
- Insect
- Anopheles darlingi
- Gene Symbol
- bab1
- Assembly
- GCA_000211455.3
- Location
- scaffold:474145-476794[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3 3.3e+03 -2.9 0.0 29 36 223 230 223 237 0.80 2 3 6.7e-13 1.7e-09 36.4 0.0 1 45 476 520 476 520 0.95 3 3 0.01 27 3.8 0.8 4 20 651 666 650 666 0.93
Sequence Information
- Coding Sequence
- ATGGGTAGCAGCGAAGGACAAACGTACTGTCTGCGATGGAACAATCACAAATCCAACCTGGTCGAAATACTCGACGCTTTAATCAAAATGGAGTGCTACGTAGATTGTACGATCTATGTCGACGATCAGGTCCAGTTCAAGGCGCACCGTGTGGTGCTGGCGGCCAATTCGCCGTACTTTCAGTCCATCCTGCAGGATGTGCCAATGGATCACTGCAGCATACTGTTTCCGGGTGTGAAGGAGTTCGAGATGCGCGCCCTGCTTGAGTATATGTACACCGGTGAGGTGAACGTGACACAGGCGCAAATCCCACGCATCATGAAGATCGCCGAGCAGCTGGAAGTGAAGGGGCTGTACGATATGGCTGACCTAAAGGGTCGGTTCGACAAAATGGTTGATATCGATCATCACCTGCGAGAGCGTGACCCAGCGACAATGCTGCTGGCGAGCAACAATAATTACAGCACCAAGACCGGCTCGGGTGGCGTCGGTGGTAGCTGTAGCTCATCGGCTTCATCTTCCTTCCAGCATGGTCTCCATGCAACGACCAGCAGCCAGAACAACCCTCATACGTTGCAACACCAATCGTCGCCAGTGATCTCCACGTCAACCAATGTTTCGATCGCTCAAAGCAGCAGCGCATCACCACCGTACACCTACAAATCTCCATACTCTAGCCTTTACTCGCGTAGTCCGGGGGCCGTCGAAAGGGATCGCGAACGAGAAGAGCGCAGTCGCGATCGTTCTTCCTCGTTCTCTCATGCTACCTCCTCACCGCACATTCAGTCTACTACCAGTACCAGCTCGAGCACGACAACGATCCAACAGATTGGCGGCCAAGGACCTCAGGGCGGAACATCGACATCCCATCCGACAACCGGTACCCCTTCGGGTAGTTCTTCAGCCACTCAACCATCAACTGCTGCCGCTGCGGCAGCCTTAGCTGCCAGTTGGCCAGGACTTAGCGGCCAGATACCCGTATCGCTCGGACAAACGCAGTTGCACAGTATGCTGAGCTCGGCCTACGATTCAAGCACGGACATGAATCCACTTAAACGCAAGAAGCTTCAGTCAATGTCAAGTATGCTGCGTGACACTCCTATTCTGCGTAATGTGTTGGCACAAGCCAATCCGGCCGATTCTTCGCAGCCTGGTGCTTCTCCCTCCGGTACATCATCATCGGCAGTGTCTACTATCCAGCCAATCCCGGGCAGCATGAAGCCTGATTCCGAGCGTCCTGGCAGTCACCATTCTAATGGTAGCGGTTATAAGCTAATAAAAGAGCCACCACACTCGCCATATGCTGATAAGTCATTCGAGGACGATCTGATGGATTCACCACACAATTTCAGTGGCGATGCGCGACTTGCCTCATATGTGCCACATCAGCAGCAGAAACCCGAGTGGAAACGCTACAAGCAGTATACTCGGACAGACATCTTGAACGCGATCGACTGCGTGCGGAAGGGTATGAGTGCATTGCAGGCTTCACGTAAGTTTGGAGTTCCTTCGCGTACACTGTACGATAAGGTGAAGAAGTTGGGCATTACTACTGGCCGACCGATTAACCGAGGGCTAAAGCGCTCACCAAGTTCGAGCAGTAGTCCGGCACCGTTTCCGTACGGATTGAGTGGTGCAAGTCATATGTTTGGACCTGGTTCATCCGGCGGTTCCGGAGCACACCCGGGTGACCATCACCAGCAGATTGCATCTCAGTCTCAACAGCAGGATGAGGAAACGGCAGCAGCGGCGGCAGCTTCGGCCGCTGCTGCAGCCCTAGCACACCATGAAGCTACCGGTCGGATGATTAAGCTAGAGCACGGCAGCCACCATGGAATTCCACCGACGATACCCCACCCAGCAGCCGCCCTGCTCGATCCTTCTTTTCTGCAACAAGCACTCGAAGCGCGTGGAGGTGATATTGCTGGTCGAGAAGCTCTTCATGCGATGGCCTTCGCGGCAGCCGCTCATGCGGCTGTAAACGGAATGAGCACGTCTCCGGGTACGCATGGTACAGCTCGATCTCCGAGCCCAAATGTGCTGATGAAGTACATGCGCTCTGTGTCGATGAGCTCTCCGGAAGATGAGCGTCACCATCCTCAACATCCACCCCAACATCCACCGCGGGATGCTGAGATGGATGAAGCTCTTCCGGACGCAAGGCAGCGACATCACAATGGGGCGGATGCGCTAGCCTCGTACGGTGGTCGACGTGCTGCTATCGAGCATCCAATGGAGCAGGACTCGATCGATGAGACCGGCAGTGACTGCGGTGGACGTGCATCTAGCAGAGCTGCACCAGAGCCACAGGACGACCATGTCGAGGATTTGTCGATGGGACCGAAGCGTGACTCAGAAGAAAGAGGTCTCTCGGTGTCTcccccccTGGCCGATTTACGTCGACCTTCATCACACCGCTCAAGATCACCGTCCCCTCATGTGCCCCCGCAACCACAGCCGCAGCAACAAGGCGTCATAGTGCCTGCTCCCGGTAAGCTGAAGGAAGACTACAACATCTCCATCAAGCGTGAAATCATCGCCGATAGCAACGCACCGTCGGAGTCATCGTAG
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMECYVDCTIYVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVKEFEMRALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLYDMADLKGRFDKMVDIDHHLRERDPATMLLASNNNYSTKTGSGGVGGSCSSSASSSFQHGLHATTSSQNNPHTLQHQSSPVISTSTNVSIAQSSSASPPYTYKSPYSSLYSRSPGAVERDREREERSRDRSSSFSHATSSPHIQSTTSTSSSTTTIQQIGGQGPQGGTSTSHPTTGTPSGSSSATQPSTAAAAAALAASWPGLSGQIPVSLGQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMLRDTPILRNVLAQANPADSSQPGASPSGTSSSAVSTIQPIPGSMKPDSERPGSHHSNGSGYKLIKEPPHSPYADKSFEDDLMDSPHNFSGDARLASYVPHQQQKPEWKRYKQYTRTDILNAIDCVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRGLKRSPSSSSSPAPFPYGLSGASHMFGPGSSGGSGAHPGDHHQQIASQSQQQDEETAAAAAASAAAAALAHHEATGRMIKLEHGSHHGIPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPNVLMKYMRSVSMSSPEDERHHPQHPPQHPPRDAEMDEALPDARQRHHNGADALASYGGRRAAIEHPMEQDSIDETGSDCGGRASSRAAPEPQDDHVEDLSMGPKRDSEERGLSVSPPLADLRRPSSHRSRSPSPHVPPQPQPQQQGVIVPAPGKLKEDYNISIKREIIADSNAPSESS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00092757;
- 90% Identity
- iTF_00092258;
- 80% Identity
- iTF_00098483;