Aaqu006674.1
Basic Information
- Insect
- Anopheles aquasalis
- Gene Symbol
- bab1
- Assembly
- GCA_002846955.1
- Location
- NJHH01001513.1:8952-11611[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2 4e+03 -2.9 0.0 29 36 225 232 225 239 0.80 2 3 1.2e-12 2.1e-09 36.4 0.0 1 45 482 526 482 526 0.95 3 3 0.018 32 3.8 0.8 4 20 657 672 656 672 0.93
Sequence Information
- Coding Sequence
- ATGGGTAGCAGCGAAGGACAAACGTACTGCTTGCGATGGAACAATCACAAATCCAACCTGGTCGAAATACTGGACGCGCTGATCAAAATGGAGTGCTACGTAGATTGCACGATCTACGTGGACGATCAGGTGCAGTTTAAGGCGCACCGCGTCGTGCTGGCGGCCAATTCGCCGTACTTTCAGTCCATCCTGCAGGATGTGCCGATGGATCACTGCAGCATACTGTTTCCGGGTGTGAAAGAGTTCGAGATGCGCGCCCTGCTGGAGTATATGTACACCGGGGAGGTGAACGTGACACAGGCGCAAATCCCACGCATCATGAAGATTGCCGAGCAGCTGGAGGTGAAGGGACTGTACGATATGGCTGACCTAAAGGGCCGGTTCGACAAGATGGTTGATATCGATCATCACCTGCGAGAGCGTGACCcaacgacgatgctgctggcaagCAACAATAACTACAGCACCAAGACGACCGGATCGGGTGGCGTCGCTGGTAGCTGTAGTTCGTCCGCTTCATCTCCCTTCCAGCATGGTCCCCATGGTGCAACGACCAGCAGCCAGGGCAACCCGCATTCACTGCAACACCAATCGTCGCCAGTGATCTCCACATCAACGAACGTTTCGATCGCtcaaagcagcagcgcatcaccACCGTACACCTACAAATCTCCCTACTCGAGCCTCTACTCCCGTAGCCCGGGAGCCGTGGAAAGGGATCGCGAACGTGAAGAGCGCAGTCGCGATCGTTCGTCCTCGTTCTCCCATACTACCTCCTCGCCGCACATTCAATCTACTAGCAGTACTAGCTCGAGCACAACGACGATCCAACAGATTGGCAGCCAAGGACCTCCGGgtggaacatcatcatcaacatcccaTTCGTCAAGCGGTACCTCTGCGGGCAGTTCCTCCTCAACCACTCAACCATCGACGgctgcggccgcagcagcctTAGCTGCCAGTTGGCCAGGACTCAGTGGCCAGATACCGGTATCCCTTGGACAAACGCAGCTGCACAGTATGCTGAGCTCGGCCTACGATTCCAGCACGGACATGAATCCACTTAAACGCAAGAAGCTTCAGTCAATGTCCAGTATGCTGCGTGACACACCGATTCTGCGCAATGTGTTGGCCCAAGCCAATCCAGCCGATTCTTCGCAGCCTGGTGCATCGCCCTCCGGTACCACGTCATCGGCCGGCGTGTCCACGATCCAGCCAATCCCTGGCAGCATGAAGCCTGACACCGAGCGTCCTGGCAGTCACCACTCCAATGGTAGTGGCTATAAGCTAATAAAAGAGCCACCACACTCGCCATACGCTGACAAGTCGTTCGAGGACGATCTGATGGATTCGCCGCACAACTTTAGCGGAGATGCCCGGCTTGCCTCATACGTgccacatcagcagcagaagcccgAGTGGAAACGCTACAAGCAGTACACCCGGACGGACATCCTTAACGCGATCGACTGTGTGCGGAAGGGTATGAGTGCGCTGCAGGCTTCGCGTAAGTTTGGCGTTCCTTCGCGTACGCTGTACGATAAGGTGAAGAAGTTGGGCATCACTACGGGCCGGCCGATTAATCGGGGATTGAAGCGATCGCCAAGTTCGAGCAGTAGTCCGGCACCGTTTCCGTACGGATTGAGTGGTGCGAGTCATATGTTTGGCCCGGGCTcatccggtggttccggtgcacACCCGGGtgatcatcaccagcagatGGCATCTCAATCTCAACAGCAGGATGAGgagacggcagcagcggccgcagcatcggctgcagctgcagcccTAGCACACCATGAAGCTGCCGGTCGGATGATAAAGCTCGAGCACGGCAGTCACCATGGAATTCCACCGACGATACCCCATCCAGCGGCTGCCCTGCTTGATCCTTCCTTCTTGCAACAAGCGCTGGAAGCACGTGGAGGTGATATTGCTGGCCGTGAGGCTCTTCATGCCATGGCTTTCGCTGCAGCCGCTCATGCGGCTGTGAACGGGATGAGCACATCTCCCGGAACCCACGGAACGGCTCGATCTCCGAGCCCGAATGTGTTGATGAAGTACATGCGCTCTGTATCGATGAGCTCGCCGGAAGATGAGCGTCACCATCCGCAGCATCCACCGCAACCTCGAGAGGTTGACATGGACGAAGCGGTTCCGGACGCAAGGCAACGTCACCATAATGGGGCAGATGTGCTAGCTTCCTACGGTGGTCGACGTGCAGTTATCGAACATCCGATGGAGCAGGACTCGATCGATGAGGGCGGCAGTGACTGTGGTGGGCGTGCGTCCAGCAGAGCTGCACCGGAGGCGCAAGACGATCATGTGGAGGATCTGTCGATGGGACCGAAGCGTGACTCGGAGGAAAGGGGCCTCTCGGTATCTCCCCCGCTGGCCGATTTGCGTCGACCTTCGTCACACCGATCAAGGACACCGTCTCCTCATGTGGCCccgcaaccacaaccgccACAGCAACAAGGTGTCATTGTGCCTGCTCCAGGTAAGCTGAAGGAAGACTACAACATCTCCATCAAGCGGGAAATCATCGCCGATAGCAACGCACCGTCGCACGAGTCATCGTAG
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMECYVDCTIYVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVKEFEMRALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLYDMADLKGRFDKMVDIDHHLRERDPTTMLLASNNNYSTKTTGSGGVAGSCSSSASSPFQHGPHGATTSSQGNPHSLQHQSSPVISTSTNVSIAQSSSASPPYTYKSPYSSLYSRSPGAVERDREREERSRDRSSSFSHTTSSPHIQSTSSTSSSTTTIQQIGSQGPPGGTSSSTSHSSSGTSAGSSSSTTQPSTAAAAAALAASWPGLSGQIPVSLGQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMLRDTPILRNVLAQANPADSSQPGASPSGTTSSAGVSTIQPIPGSMKPDTERPGSHHSNGSGYKLIKEPPHSPYADKSFEDDLMDSPHNFSGDARLASYVPHQQQKPEWKRYKQYTRTDILNAIDCVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRGLKRSPSSSSSPAPFPYGLSGASHMFGPGSSGGSGAHPGDHHQQMASQSQQQDEETAAAAAASAAAAALAHHEAAGRMIKLEHGSHHGIPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPNVLMKYMRSVSMSSPEDERHHPQHPPQPREVDMDEAVPDARQRHHNGADVLASYGGRRAVIEHPMEQDSIDEGGSDCGGRASSRAAPEAQDDHVEDLSMGPKRDSEERGLSVSPPLADLRRPSSHRSRTPSPHVAPQPQPPQQQGVIVPAPGKLKEDYNISIKREIIADSNAPSHESS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00092906; iTF_00092258; iTF_00098341; iTF_00098483; iTF_00092096;
- 90% Identity
- iTF_00092258;
- 80% Identity
- iTF_00092906;