Adar009635.1
Basic Information
- Insect
- Anopheles darlingi
- Gene Symbol
- E2FC
- Assembly
- GCA_000211455.3
- Location
- scaffold:166096-167670[+]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.74 2.6e+03 -2.5 0.0 23 39 13 31 8 32 0.70 2 3 1.7e-26 6.1e-23 79.6 0.0 2 65 45 109 44 109 0.98 3 3 1.2 4e+03 -3.1 0.0 25 39 306 320 301 321 0.82
Sequence Information
- Coding Sequence
- ATGGAAACGGAAAATGGGCCACAGGAAAGCGAGCCCACCGTGGGCACCAAGAAGGTAGTGCAGAATTTAAGTTCAACCGTGATACAAAGGAGGTGCAGAAAGGATGAAGATGATGATGGTACTAGGCGCGTGGATAAATCGCTGACTCTGCTCACGCTCGGTATGGTTAAGATGTTGCGCGAGTCCCCGGACGGATCGCTGTTCCTGGGAGAGGTGGCGAAGATCCTGCGAGTGAATCAAAAGCGGCGGGTGTACGATGTCACCAACGTGCTGGAGGGCATAGGATTGATTGAAAAAATAGGCAAAAACCACGTCAAATGGATCGGAGAAGAGCTGACGAGCGAATCGTGCCGCGGGACGGCCCGCAAGATCGGCATGCACATCAAGGAGCGCCGAAAGCTGGAACTTCGCGAAGCATGGTTCGATGCGAAACTGCAGCGCATGCGGAAGAGCATCGATCTTGTACTGAAGGAAGAGCGGAGCCGTTCATTCTTGTACGTCACGAGTGATGATCTGACGCGCATACTACCGCACGAACGTCAACACATGCTCATCTTGTGCAGCGATTATCGATCACCTCGGAAACAGGCTACGTTCGGGCCCTTCCCTTCCATGTTATATCGTCGAATGCAGCGCGTACTGAAGGTACGTGCAAAACGACGGGGTCAACCGTTGGATATGCTTATGCTACAGACCCCTGCCGGTACCTGCTACACGCGCCCTAGTAGGCGAGTAGCGATGTTCCGCGGTGATCCTTCCTCGTATGTGCGGCTCAATATGAACGAAGAACAACTATGGAGGAAGAGCGGGCAGAAGTCGCCCGTGAACGATATGGAAGGACATAACGGCGCAACGGGAACTGATGAGTTTCAGGAAAGGGAAAGACAGGAAGAGCATGGAAACGGTAGCGAAGACGACTGCGACGACGTGGTGCAGGAATTGAGACGGGAACGACAAAGAATGGAGCTGGCACGGTTACTACTCGATGACCGAACGGACCTCACCGGCTACAGCCGTTATCAACCGAAACAGTGGTCTACCATGGAACTAGAAGCGGAACACGGAGATTTCTCGACGCCTTTCATTCTGCTCGATATGAAACCATGCGGTGATTATCATCAGGCTCTTAGGGAGGATGATGGTGTAAATGAACTATTCGATCTTCGATTTCCCTCCGGCGGTGACGAGGAATCAACCGATAAAGTGAAAGAAGAACCACTAGGTGACAGTACTGATGTCCAACCGTCCGCCACTATCCAGCCAACGTAG
- Protein Sequence
- METENGPQESEPTVGTKKVVQNLSSTVIQRRCRKDEDDDGTRRVDKSLTLLTLGMVKMLRESPDGSLFLGEVAKILRVNQKRRVYDVTNVLEGIGLIEKIGKNHVKWIGEELTSESCRGTARKIGMHIKERRKLELREAWFDAKLQRMRKSIDLVLKEERSRSFLYVTSDDLTRILPHERQHMLILCSDYRSPRKQATFGPFPSMLYRRMQRVLKVRAKRRGQPLDMLMLQTPAGTCYTRPSRRVAMFRGDPSSYVRLNMNEEQLWRKSGQKSPVNDMEGHNGATGTDEFQERERQEEHGNGSEDDCDDVVQELRRERQRMELARLLLDDRTDLTGYSRYQPKQWSTMELEAEHGDFSTPFILLDMKPCGDYHQALREDDGVNELFDLRFPSGGDEESTDKVKEEPLGDSTDVQPSATIQPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -