Basic Information

Gene Symbol
ARID5B
Assembly
GCA_000211455.3
Location
scaffold:2969-31668[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-12 1.1e-08 34.6 0.1 3 89 484 563 482 563 0.89

Sequence Information

Coding Sequence
ATGCAACGAAAGTGTGTTACCGATGCGGGCGGTGGTACTAATGGGGGTAGCGGAAGCACCGGTGGCGGTAATGGTGGCGGCAATGCTGCTAATGCTGCCAGTAGCAACGGAACTCGTGGCAGCATCCAAAACAATCTATGCGGAATGGCGTCGGTTGATCGGAGCAACCTGCGGCCGCTGGTGCTGGCACTTGGCGACTGCATTCCGGTACGACCGTGGTCCGACTCACCGATAGCGTGCCTGGCCGAGCTGCGCATGGTGTGGCGGGACCGGAACGAGCAGTGTCTGCTGATAGCCCTGCGGCTCTACTTCCTGCCGGAAAACACACCACTCGGTCGCAACTGTCATGGCGAGGACGAGGTGCTCGCGATCTCGGACAAGGTGATACTGCGCGCCGAAGATCTACTGAACTGGATCGTCACCGATCAGGATTGGAGCTGGGGCCTGCAGACAGTGTTCAACGAGGGCAGTGCCAAGGATTGTCTGACAATGACGCGCCATCTCAGCAAAAACTCGTCGCTCGATTTCGGGGACATCGATCGGGAGAAGCACTCAGGTGAAAACAATGCTTCAAAGGTGGCGGTCCTAAGCTTCTCGCGCTACTGCCGTTACCGTGCCATCTTGAAGCGGCTCGAGGGTGTTCAGGATGATTGGTTACGGAACACGTTGGTCGAAACGCTCGGTGGATTTGTCGCACCGCAACCGAACATGCGCATCATGTTCTGCAAAGAGACGTTTGACTATCCGGAGCTGGAAACGCACGAACTGCTCTGCAATCATCTGGCACCGAAGCTCAAGGGTCGGCCACGTGGCAAACGGAAGAAAACGCTCTCCGACTCCTCGCAGTACACCAAGAAGGAAGGCTCCGACGATAGTGAATCCAACGAAACGGACGTTTCCGATTATTCCTACAGCAAGGTATCACCTGGCAAAAAGGTGATCGATCTGCATCCAACACCGCGCTACAACCCACGGCCCTCGAGAGGATCATCGCAAACGAAGCAAGAACCGATCAGTGTCGTCATCTCGGCCTCGGCTGGCACGGTCAAGTCGAGTGCGCAGCATCACTACTCCTCCACGAACCATCTTTCGCAGCGCAATCGCTCCAAGTCCACCTCGAAATCATCGAAACCGGCACCGAAGACGAAAACGAAAACGTCACCGGGCAAAGCTGGACGCAAACCGTCCAAGAGTGGTCGAAAGTCGGCGGCCGCGTTGGCAGCCGCAGCGGCCGAAGAGTCGGAAGAGGAGGAGGACGATGAGCAGGACGGTGATGATGGTGAGGAGGATGCTTCCTCGCCACGGCGCGGTGGATCGAAGGATCGTgaggccggagacgacggagaggagggagaggtggaaggacacgattacgaggatgaggatgaggacgaggaggaagaggatgatAATCTGTTCCGGGCGAACGATCGCATGGGACCGGTGGAGCGCGAGTTTCTGCAGCGATTGCAGGAGTTTCTCGATCCGCGTGCCCTTCAGTATGCGGATAGTCAGGCCTCTTCTCTCAAGAATGTGAGTTTGTACGCGGTTTACGCAAAGGTACAGAAGATCGGTGGCTACAGTGCAGTTACGGATAAGGAGGTGTGGAACCAGCTGCTACACGGAACGGGCGGTGAGAATGGAGTGTTGAGTCGGAGAAAGTACGAGAAGATAGTGTTGCCGTTCGAGAAGCATCTACGTGAGCTGGCTGGCGAAGGAGATGATCGTAGCGGTGGTGTTAAGCGAGAAGCGATGCTACTACTCGGTGATGAAGAGCTGGAGAATAAGATCCGGCTGTTGCGGGATGTGAAGGTTGAGAAGCGCGATCCGCTGGACGATAGCGATGATCGGTTGCATCGGCGAGCGTTGGGTGATTCCGGGCTCGATTATTCCGTCAAGCGTGAGATGCCCGATAAGGATGATCAGCAGCAGTCGCTGAAGGGTGGATTGCGCGAGGATAGTAAGGGAGGATTAAGCCCAAAGGTTCACCTCGGTATGTCACCGGTATCGGTCCCTCTGACGGTGATCGTGCGACCGAACCTGGACGAGAAGGATCAACAGTCATCGAAGATCCAGATCAATCAACCACACACGACGATCACGGTGCACCAGACGACGATCCATCCGTCGCACAACAACCACCACCATCATCACAACAATCATCATCTGCATAATCAAGGGTTGAGCAATGCGCACGGTGGTGCCGGTGGAGGTGGAGGAAACGGAGGCTCGGGCAGTGAGCTGAGTGGCCAAAGCCCACAGCACATTACCAATCAGATACAGATCACGAACCAGATCCAGATTCAACAGATTACCGTTCAATCGAACGATAAAGCTAACGGACAGGGTGTTAACGGATCGAACCAGGGTGGTGGTTCGGGCAGCTGTTCCGATGGACCGCAGTACAAGTACAGCTTCAAGCAGGATCGATCGGGACAAGAGCTTAGCATCGAACCGGCCGCAATGGCTGCCAAATCGGCCAAATCAACCAGCACACCGCTGGGATCACCTTCCGAGGCTCACTCGCAGTCTGCCTCGCTCAGTCTGTTCCCCTTCGGTGGCCGGCAGGGTACTGATCCGGATCTGACCATCAAGGAGGTATCGGTATGCCCGACGAGCGGTACACTGTCGATCACTTCCAGCCCCTGCACACCATCGCGGACGAGCTCGCTGCGTAATGTGCGTATGAAGAATGATCGTAAGGCATCCTCGAGTGCCGGTGGCCCCGGTACCGGTGCCGGTGGTTTGATGATGGATGGAACGTATCTGAACGTCGGCAGTGGCGGACAGAAGACGGGTCCGTACGAGAAGGAAAACATTCCGCTGCTTGGTACCGGATCGGCGAGTCTGTTCGGTGGTCAAAGCCTTACCACGATTACGCCGATACCGGGCAATCTTATGATGCCCGGTAGCTACTTGGGTGGATCACGATCCGGATACGAGGATTCGGTGTCGAAGCACGGGTTCGGATCGGCATCTTCTGGTTCTTCCTCCTCGATGAATGCTGCTGCACCCGGCTCGATGGCGGCTAATGCTACGGAAGTGATCGATCTAGTTGATAGCGACAACGAGAGTGATCAATCTCCGACAGCCTCCTCGACAGCCGCTGGTCGGAAACAGGCCGGTCAAGCGATGCGTCCCATCCCTTCGCTGTTGCCACCGATGAAGAAGCGCAAGCTGGATATCTTGCGTGAGGGAGGCCTCGAGGTGACACCCATTTCGAATGGTTCCAGTATCTTCTCGGCGATCAGCAAGAACGCTCAACAGGGGGCGTCCCGTGGTGCACCGAATCCGATGCGGATAAACATCACGGCCGAGCTGAACAGTGCTCCAGCACCATTACAGCCACCATCATTGTCTGGTGCTGGTGGCGGCCAAGGACTATCGTCCGGTGCCGGTGGAAGGCGTGAGGCTCGCAAATGCATTCCAACACCGATCGAGTTCCAAACGCACTGTATGTATACGCGCACGGGCAAAATCTTTGGTGATCCGAAGGAACTGATGCCACCGAGACCGGTACCTGCTCCCGTACCGGAGCTACTCGATCTGACCGGTCTGAAGGGGCCAGGTGGGCCCCAGTTTATCGGTGGTGGTCTTGACTTCTCCGGAACTGGTTCACGgcaacagcatcaaccgcagcaccaccagcaacagcaacagcagcagcaacaacagcCACTTAATCGTGGGTCTTCTACCTCCCGGACGGCTTCTAGTTTGCAGATTACTCTTGTGCCAGGTCCAACCAATCCGGGACTACCACAGGGTGCACCGCTACCACCACCTCCGATGATGACTCCACTCAATATTCCAGTTCCGGTGCCAAGCCATCAACAGCACCACCAACAGCCATCGGCCGGAGGTCTAATGCATCCCGGCCCCCTCCAGTCCTCCAGCTCCTTCGGCGGCCATAAGAAGCAAAACAAACCGTACGAACTTGTGCCATTGCGGGGCGATGGGATACCGACGCCCGGACTGGGCAACCCATCCGTTAACTATCCGGTGAAGGCACCGAGCCCGAAAGTGACGATCGGTCcttcgtcctcttcttcgtcttcatcctcttcCACGAACGGCGGTACGGCTACACTACCACCCGGTGCGGCACCCTCACCGAACTCGCTGCTCGAAACCGGTCTCATGCTGGCGAACCTCCAGAAAGCCAATCCCGTCCTCGTGGCCAGTATCCTGTCCTCCTCGGGACTTTCGAAATCTTCCATTCCCGGTTTGACGCAACTGTTGGGAACGCTAGCGGATCAACCGCCGCTTGCTGCGCCCAAGAAATCCCAGCGTAGACGCTCCAATTCACAGCAAGCACAGGCTGCTACGAATAATGTCGCACCGACAGCACCGGGCTGTGGAGCTGTCAACTCACCAACATCATCGGCAGTTGCTGGGCAACTGTCACCGTTCTCCATTCCAGCGCCACCGACGATTGGACCACCGACGGTACCGCTTTTGCCGCCGAGTGTAGGCTCTCCGCAGCTGCTCCATCCACCGCCGGCCGATTCACCCACCTCCGCGAACCATCCGCTCAGCCAGCAGATCAAACTGCTCCAGCAGGTGCAGTTGCAGCAGAAGCAAAAGGAATTGTTGGCACAGTTTGGTCCGTTTCCACCTCCACCGCCACTACCAACGCAGCAATCGTTgcagcaacagcagcagcagcagctgcaTCTACCATCCGGACCATCGCCTGGTGGCCATGTTTCACCTGCCTCACCGTCCCTGCCGACCGGTGCCGGCCCCGGTTCCCCATTGACCGGTACCCCACCACTGACGCATCCCTCGCCACCATCGTTGCCGCCACTGCCACCGGGGGTTCAGTTACCACGGTTGCCACCGGTCGGCGTACCACCAACCGTTGGCTCATCGGCGGCGGCAGCTGCCGCTGCAGGGGCCGTCCTAGCAGGATTGCCACCTGGACTTGCCGCTAGCGGCTTTCCACCACCGTTCGATCCCCTTTACCTGCAGCTGTATGCCAATCCGGGACTCTATCTGCAAAGCCTGCCACCCGAGCAGCTGCTCCAGCTGTACAAAAACTTTCCCCAAAGCATTCCAATCACCAAGAGCTAG
Protein Sequence
MQRKCVTDAGGGTNGGSGSTGGGNGGGNAANAASSNGTRGSIQNNLCGMASVDRSNLRPLVLALGDCIPVRPWSDSPIACLAELRMVWRDRNEQCLLIALRLYFLPENTPLGRNCHGEDEVLAISDKVILRAEDLLNWIVTDQDWSWGLQTVFNEGSAKDCLTMTRHLSKNSSLDFGDIDREKHSGENNASKVAVLSFSRYCRYRAILKRLEGVQDDWLRNTLVETLGGFVAPQPNMRIMFCKETFDYPELETHELLCNHLAPKLKGRPRGKRKKTLSDSSQYTKKEGSDDSESNETDVSDYSYSKVSPGKKVIDLHPTPRYNPRPSRGSSQTKQEPISVVISASAGTVKSSAQHHYSSTNHLSQRNRSKSTSKSSKPAPKTKTKTSPGKAGRKPSKSGRKSAAALAAAAAEESEEEEDDEQDGDDGEEDASSPRRGGSKDREAGDDGEEGEVEGHDYEDEDEDEEEEDDNLFRANDRMGPVEREFLQRLQEFLDPRALQYADSQASSLKNVSLYAVYAKVQKIGGYSAVTDKEVWNQLLHGTGGENGVLSRRKYEKIVLPFEKHLRELAGEGDDRSGGVKREAMLLLGDEELENKIRLLRDVKVEKRDPLDDSDDRLHRRALGDSGLDYSVKREMPDKDDQQQSLKGGLREDSKGGLSPKVHLGMSPVSVPLTVIVRPNLDEKDQQSSKIQINQPHTTITVHQTTIHPSHNNHHHHHNNHHLHNQGLSNAHGGAGGGGGNGGSGSELSGQSPQHITNQIQITNQIQIQQITVQSNDKANGQGVNGSNQGGGSGSCSDGPQYKYSFKQDRSGQELSIEPAAMAAKSAKSTSTPLGSPSEAHSQSASLSLFPFGGRQGTDPDLTIKEVSVCPTSGTLSITSSPCTPSRTSSLRNVRMKNDRKASSSAGGPGTGAGGLMMDGTYLNVGSGGQKTGPYEKENIPLLGTGSASLFGGQSLTTITPIPGNLMMPGSYLGGSRSGYEDSVSKHGFGSASSGSSSSMNAAAPGSMAANATEVIDLVDSDNESDQSPTASSTAAGRKQAGQAMRPIPSLLPPMKKRKLDILREGGLEVTPISNGSSIFSAISKNAQQGASRGAPNPMRINITAELNSAPAPLQPPSLSGAGGGQGLSSGAGGRREARKCIPTPIEFQTHCMYTRTGKIFGDPKELMPPRPVPAPVPELLDLTGLKGPGGPQFIGGGLDFSGTGSRQQHQPQHHQQQQQQQQQQPLNRGSSTSRTASSLQITLVPGPTNPGLPQGAPLPPPPMMTPLNIPVPVPSHQQHHQQPSAGGLMHPGPLQSSSSFGGHKKQNKPYELVPLRGDGIPTPGLGNPSVNYPVKAPSPKVTIGPSSSSSSSSSSTNGGTATLPPGAAPSPNSLLETGLMLANLQKANPVLVASILSSSGLSKSSIPGLTQLLGTLADQPPLAAPKKSQRRRSNSQQAQAATNNVAPTAPGCGAVNSPTSSAVAGQLSPFSIPAPPTIGPPTVPLLPPSVGSPQLLHPPPADSPTSANHPLSQQIKLLQQVQLQQKQKELLAQFGPFPPPPPLPTQQSLQQQQQQQLHLPSGPSPGGHVSPASPSLPTGAGPGSPLTGTPPLTHPSPPSLPPLPPGVQLPRLPPVGVPPTVGSSAAAAAAAGAVLAGLPPGLAASGFPPPFDPLYLQLYANPGLYLQSLPPEQLLQLYKNFPQSIPITKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00091968; iTF_00092639;
90% Identity
iTF_00092639; iTF_00091968;
80% Identity
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