Basic Information

Gene Symbol
-
Assembly
GCA_002846955.1
Location
NJHH01008493.1:73309-81738[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-12 7.9e-09 35.3 0.1 3 89 320 399 318 399 0.89

Sequence Information

Coding Sequence
ATGACGCGCCATCTCAGCAAAAACTCATCGCTCGACTTCGGGGACATCGATCGAGAGAAGCACTCAGGTGAAAATAATGCTTCAAAGGTGGCGGTCCTAAGCTTCTCGCGCTACTGTCGCTACCGGGCAATCTTGAAGCGACTCGAGGGTGTGCAGGATGAGTGGTTGCGGAATACTTTGGTCGAAACGCTCGGTGGATTTGTCGCACCGCAACCGAACATGCGCATCATGTTCTGCAAAGAAACATTCGACTATCCCGAGCTGGAAACGCACGAACTGCTCTGCAATCATCTGGCACCGAAGCTCAAGGGTCGACCACGAGGCAAGCGAAAGAAAACGCTCTCCGATTCGTCGCAGTATACCAAGAAGGAAGGTTCCGACGATagcgaatcgaacgaaacggatGTTTCCGATTATTCCTACAGCAAGGTATCACCTGGCAAAAAGGTGATCGATCTGCATCCAACACCGCGCTACAACCCGCGTCCCTCGAGAGGATCGTCGCAAACGAAGCAAGAACCGATCAGTGTCGTCATCTCGGCTTCGGCTGGCACGGTCAAATCGAGCGCGCAGCACCATTACTCCTCCACGAACCATCTTTCGCAGCGCAATCGCTCCAAGTCCACCTCGAAATCATCGAAACCGGCACCgaagacgaaaacgaaagcatcGCCGGGCAAAGCAGGACGCAAACCGTCCAAGAGTGGTCGGAAATCGGCGGCTgcgttggctgctgcagcggccgaAGAgtcggaagaggaagaggacgacgagcaggatggtgatgatggtgaggaggAAGCATCTTCCCCACGACGTGGTGGTTCGAAGGATCGTGAAGCAGGGGAGGATgaggagggagaagggggagcCCAAGATtacgaggatgaggaagaggacgaagaggaagaggatgataATCTGTTCCGGGTGAACGATCGAATGGGTCCGGTGGAGCGTGAGTTCCTGCAGCGATTGCAGGAGTTTCTCGATCCGCGTGCCCTCCAGTATGCCGATAGTCAGGCCACTTCCCTCAAGAATGTGAGTTTGTATGCGGTCTACGCAAAGGTACAGAAGATCGGTGGCTACAGCGCGGTTACGGATAAGGAGGTGTGGAACCAGCTACTGCATGGAACGGGCGGTGAAAATGGAGTGTTGAGCCGGAGAAAGTACGAGAAGATAGTGCTGCCATTCGAGAAGCATCTCCGCGAGCTGGCTGGTGAGGGAGACGATCGTACGAGCGATGTTAAACGTGAAACCATACTACTACTCGGCGATGAAGCACTGGAGAACAAGATCCGGCTGTTGCGGGATGTGAAGGTCGAGAAGCGTGATCCGCTGGACGATAGCGATGATCGGTTGCATCGGCGAGGCGATTCCGGTCTCGATTTTTCCGTCAAGCGCGAATTGCCGGATAAGGAAGAGCAGGCGATCAAGGGTGGATTGCGTGAGGACAGCAAGGGAGGACTAAGCCCGAAGGTACACCTTGGCATGTCACCGGTTTCGGTACCGCTGACGGTGATCGTGCGACCGAATCTGGACGAGAAGGATCAACAGTCATCGAAGATCCAGATCAATCAACCACACACAACGATCACGGTGCACCAGACGACGATTCATCCGtcgcacaacaaccaccatcatcatcatcacaacaaccatcaccatttgcTGAATCAAGGGTCAGGCAATACGCATGgaagtgctggtggtggaggagctgGATCGGGCAGTGAGCTGAGCGGTCAAAGCCCACAACACATTACCAACCAGATACAGATCACGAATCAGATCCAAATTCAACAGATCACCGTTCAATCGAACGATAAGTCTAACGGACAGGGTGCCAATGGATCGAACCAGGGTGCCGGATCGGGTGCCGATGGTCCGCAGTACAAGTACAGCTTCAAGCAGGATCGATCAGGCCAAGAGCTTAGCATCGAACCGGCCGCAATGGCTGCCAAATCGGCCAAATCAACGAGCACACCACTGGGTTCACCATCCGAGGCTCACTCACAGTCTGCTTCGCTCAGTCTGTTCCCCTTCGGTGGCCGGCAGGGTACGGATCCGGATCTGACCATCAAGGAAGTATCGGTATGTCCGACGAGCGGTACACTGTCGATCACTTCCAGCCCTTGCACACCATCGAGGACGAGCTCGCTGCGTAATGTGCGTATGAAGAACGATCGTAAGGCATCCTCGAGTGCCGGTGGCCCGGGAACTGGTGGTTTAATGATGGATGGAACGTACATGAACGTTACGGGCACGGGACAGAAGACGGGTCCGTacgagaaggaaaacattccactGCTCGGTACCGGATCGGCGAGTCTGTTCGGAGGCCAAAGTCTCACCACGATCACCCCGATACCGGGCAATCTTatgatggccggtggtggctaCCTGAGTGGATCACGGTCCGGATACGAGGATTCGTCGATGTCGAAGCATGCTTTCGGATCGGCATCTTCTGGTACTTCCTCCTCGATGAATGCTACTCCTTCCGGTGGCACGATGGCGGCGAATGCTACGGAAGTGATCGATCTTGTGGATAGTGACAACGAGAGTGATCAATCGCCGACCGCCTCCTCGACAGCTGGCCGGAAACAGGCGGGTCAAGCGATGCGTCCCATCCCTTCGCTATTGCCACCGATGAAGAAGCGCAAGCTGGATATCTTGCGTGAGGGAGGCCTCGAGGTGACACCGATCTCGAATGGTTCCAGCATCTTTTCGGCGATCAGCAAGAACGCCCAACAGGGTGCGTCCCGTGGTGCACCGAATCCTATGCGGATAAACATCACGGCCGAGCTGAACAGTGCCCCggcaccattaccaccaccaggattgtccggtggtggccaaggcCTATCatctggtgccggtggaaggCGAGAGCCTCGCAAATGCATTCCAACCCCGATCGAGTTCCAAACGCACTGTATGTATACGCGCACGGGCAAAATCTTTGGTGATCCGAAGGAACTGATGCCACCGagaccggcaccagcacccgtACCGGAGCTACTCGATCTGACCGGGCTGAAGGGACAAGGTGGCGGGCCCCAGTTTATCGGTGGTGGACTTGACTTCTCCGGAGTTGGTTCacggcaacagcatcaaccgcagcaccagctccagcagcagcagcagcagcagccacttaATCGTGGATCTTCTACCTCTCGGACGGCTCCCAGCTTGCAGATTACTCTTGTGCCCGGTCCAACCAATCCGGTACTACCACAGGgtgcaccactaccaccgccccCGATGATGACTCCGCTCAATATTCCCGTTCCGGTGCCAagccatcaacagcaccaccttCAACAGCCATCGGCCGGAGGACTGCTGCACCCGATCCAGTCTTCTGGTGCCTTTGGCGGCCAtaagaagcaaagcaaaccgTACGAACTTGTGCCATTGCGAGGAGATGGATTACCACCGTCCGGACTGGGCAATCCGGCTGCTGCCTATCCAGTAAAGGCACCGAGTCCAAAAGTGACGATCGGTccttcatcctcctcttcgtcttcgtcctcttccacGAACGGTGGTACGGTTACACTGCCACCTGgtgctgcaccatcaccaaatTCGCTGCTCGAAACCGGTCTCATGCTGGCGAACCTCCAGAAAGCTAACCCCGTCCTGGTGGCCAGTATTCTGTCCTCTTCGGGGCTTTCGAAATCTTCCATTCCTGGGTTGACGCAACTGCTGGGAACTCTAGCGGATCAGCCACCGCTTGCTGCGCCCAAGAAATCCCAACGCAGACGCTCCAactcacaacagcagcaggcacaggTTGCTACgaccgcagcaccaccgggctGTGGGGTTGTCAACTCACCACCAGGATCGGCAGTTGCTGGGCAACTGTCACCGTTCTCCATTCCAGCGCCACCGACGATTGGACCACCGACGGTTCCGTTGCTACCGCCAGGCATTGGctctccgcagcagcagcagcagcagcagcagcagcagctacaccaTCCACCGCCGGCCGATTCACCCACCTCCGCCAACCATCCGCTCAGCCAGCAGATCAAACTGCTCCAGCAGGTACAGctacagcaaaagcaaaaggaactGTTGGCACAGTTTGGTCCgtttccaccgccaccaccactaccgccaaCGCAGTTGCCGCCATTGCAGCCACAAtcgcagcaacatcatcttccATCCGGTCCATCGCCTGGTGGCCACGTTTCACCTGCCTCACCGTCCCTGCCGACCGGTGCCGGGCCTGGTTCTCCATTGACCGGCACACCACCACTGACGCATCCGTCGCCACCATCgatgccaccactgccaccggggGTTCAAATTCCACGGTTACCACCGGTCGGTGTACCACCAACCGTCGGGTCATCGgctgcggcggcagcagctgcagcggccgtTCTAGCTGGACtaccaccgggaccggccgCAGGCGGCTTTCCGCCACCGTTCGATCCGCTCTACCTGCAGCTGTACGCCAACCCGGGGCTCTATCTGCAAAGCCTGCAACCggagcagctgctccagctgtACAAGAACTTCCCCCAAAGCATTCCAATCACCAAGAGCTAG
Protein Sequence
MTRHLSKNSSLDFGDIDREKHSGENNASKVAVLSFSRYCRYRAILKRLEGVQDEWLRNTLVETLGGFVAPQPNMRIMFCKETFDYPELETHELLCNHLAPKLKGRPRGKRKKTLSDSSQYTKKEGSDDSESNETDVSDYSYSKVSPGKKVIDLHPTPRYNPRPSRGSSQTKQEPISVVISASAGTVKSSAQHHYSSTNHLSQRNRSKSTSKSSKPAPKTKTKASPGKAGRKPSKSGRKSAAALAAAAAEESEEEEDDEQDGDDGEEEASSPRRGGSKDREAGEDEEGEGGAQDYEDEEEDEEEEDDNLFRVNDRMGPVEREFLQRLQEFLDPRALQYADSQATSLKNVSLYAVYAKVQKIGGYSAVTDKEVWNQLLHGTGGENGVLSRRKYEKIVLPFEKHLRELAGEGDDRTSDVKRETILLLGDEALENKIRLLRDVKVEKRDPLDDSDDRLHRRGDSGLDFSVKRELPDKEEQAIKGGLREDSKGGLSPKVHLGMSPVSVPLTVIVRPNLDEKDQQSSKIQINQPHTTITVHQTTIHPSHNNHHHHHHNNHHHLLNQGSGNTHGSAGGGGAGSGSELSGQSPQHITNQIQITNQIQIQQITVQSNDKSNGQGANGSNQGAGSGADGPQYKYSFKQDRSGQELSIEPAAMAAKSAKSTSTPLGSPSEAHSQSASLSLFPFGGRQGTDPDLTIKEVSVCPTSGTLSITSSPCTPSRTSSLRNVRMKNDRKASSSAGGPGTGGLMMDGTYMNVTGTGQKTGPYEKENIPLLGTGSASLFGGQSLTTITPIPGNLMMAGGGYLSGSRSGYEDSSMSKHAFGSASSGTSSSMNATPSGGTMAANATEVIDLVDSDNESDQSPTASSTAGRKQAGQAMRPIPSLLPPMKKRKLDILREGGLEVTPISNGSSIFSAISKNAQQGASRGAPNPMRINITAELNSAPAPLPPPGLSGGGQGLSSGAGGRREPRKCIPTPIEFQTHCMYTRTGKIFGDPKELMPPRPAPAPVPELLDLTGLKGQGGGPQFIGGGLDFSGVGSRQQHQPQHQLQQQQQQQPLNRGSSTSRTAPSLQITLVPGPTNPVLPQGAPLPPPPMMTPLNIPVPVPSHQQHHLQQPSAGGLLHPIQSSGAFGGHKKQSKPYELVPLRGDGLPPSGLGNPAAAYPVKAPSPKVTIGPSSSSSSSSSSTNGGTVTLPPGAAPSPNSLLETGLMLANLQKANPVLVASILSSSGLSKSSIPGLTQLLGTLADQPPLAAPKKSQRRRSNSQQQQAQVATTAAPPGCGVVNSPPGSAVAGQLSPFSIPAPPTIGPPTVPLLPPGIGSPQQQQQQQQQQLHHPPPADSPTSANHPLSQQIKLLQQVQLQQKQKELLAQFGPFPPPPPLPPTQLPPLQPQSQQHHLPSGPSPGGHVSPASPSLPTGAGPGSPLTGTPPLTHPSPPSMPPLPPGVQIPRLPPVGVPPTVGSSAAAAAAAAAVLAGLPPGPAAGGFPPPFDPLYLQLYANPGLYLQSLQPEQLLQLYKNFPQSIPITKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00098261;
90% Identity
iTF_00098261;
80% Identity
-