Basic Information

Gene Symbol
ARID2
Assembly
GCA_000211455.3
Location
scaffold:20271-30127[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.6e-24 8e-21 73.5 0.0 2 89 79 164 78 164 0.93
2 3 5.2 9e+03 -3.6 0.0 20 41 751 772 739 776 0.76
3 3 6 1e+04 -13.3 12.3 72 72 1477 1477 1435 1526 0.50

Sequence Information

Coding Sequence
ATGATGGAAGGTGTGAAAATAGAGCGAATCCTGGCAAACGCCGCGGATGACAGCAGCAACACGAACGATGCCGCCAGCATGATCAACGCGAACGCAACCGGCAATCCGGTAACATCCGGAGGGGTAACCTCCCTGATCATGGTGCCGTTTACTCCTAGCACCCCCGGGAAGGAATCCGTTAGACCGCAGAATGTGCGGCGCTCGGCACCGGCCAAACCGACGTTCGAGAAAGACAAATACAGCTTTCTGTGCGATCTGCAGATGTTCCACGACAAGAATGGGACACCATACACGAAACTTCCCAAAATTAGCGGCCGTGAAGTCGATCTACACAAACTTTACTCGGTCGTTATCAGTCGCGGAGGATGGATGAAGGTTAATGCCCGGGAAGATTGGGACGAGGTGATCGAAGAACTGGAGCTACCGATGCGCTGCGTAAACAATGAGATCGCCTTGAAGCAGATCTACATTCGTTTCCTGGATCGGTACGAACGCGTCAATTTTCATGGCGAGGATAAGGATCCGGCCGAAGATGAGGATGACGAGAAGCGGCTACATCGGCGGTGGTCCGTTCGGGCACTACATTCAATGCCGAGCGTTTACAACCATCACCAGCACAACGTGCCGGATGCGTTACGATCGTCGCTTAAGCTGTCGGACGATCTGTACCGTGCTTCTGAGTACGATAAGTTGATCCTATCCCTGCTATCGCCCCTACCGAACGAGCAGGACTTTGCGATCAACGTGTGCACGCTGATGTCGAACGAGAACAAACACACGCTGCACATTGATCGCTGCCCACGGCTAGTGTACGCGCTGTTGGCGCACGCCGGCGTTTTCAATCACTTCACGCTACGCGATACGTTCAATGAGTACTACTCAAACATCCGCAAGAACTCGTTGCAGCGCTTCTGGAAGGAATGTTTGTTCGAAAAGCCACAAGTGCTAGAGCTGTCGCTGGAGGATTGTTTCGCCAAGATGGGCACCGATCCGAGTGCGCTCATTGCCAGCATCTACCAGGATGAGGAGGAACTGGAAAGAGAGAAAGCGGAAAACGCCGATGATGCGCTGGATTCGGGTGGCGACCAGAATGATGGCCGAAGTCGCTTAAGCATGGCCACGTTGCGTACCTTTCTCAGCCTTGGCACGGGTCTGGGCACAAACGATTACATCGGCCAGCGAGTACTTCAAATTGCGGCAATCTTTCGTAATCTAAGCTTTAACGAGGAAAACCTATCTCTACTTGGCCGCAACCGCACCTTTGTCCGGTTTCTCATCATGTGCGCCAATGCGCGCTGGAACAATCTACACCACATGGGCCTCGATATGCTCGGTAACATTGCCCACGATATCGACTTGAACGATCCTCAGTCGGACGAGGTGACGCGTTGCCTGCTGTCCACCCTCTCGGAGGGACTGGAGGGTGCCGATCGCGGTGTAATCATCAGCTGTCTCGAGGTGCTGAGTAAAATCGCGCAGAAAGAATCCAACGAGGACACCCTGAACCGGTGCCTAAACCAGGAGCTGTACAATCAAATCACACTGTTTCTCTGTCTGAACGACATTATGCTGCTACTGTATACGCTCGAGTGTATCTATTCGCTGACCTCGATGGGCGAAAAGCCCTGCCACGCGATCATGCACATCCGGGGCGTACTGGAGACGCTGGTTTCGCTCGTGACGGTCGAAGCACAAAGCTACGGCCCCGATGCTTGCATTCTGATGCGAGTGGTAGAAACCATTCCGGGCAATATTGCTACCGGCCAGCAGCAGGCACCGTATCACGGAACCGCGGTACCCGGTTCAGCTACCACGATGGCCCAGCTTACCGTGCACAAGGATCCACCGCATGGATCCCCTGCTACCGGTGTCCCATACCCGACACAGGAAACTCCAAAACATCATATGGTCAACAGCAATAATCCGTTGGTAGCTGCTGCAGCTGCCGGTAACAAACCGATGCCCGCGCTATCGATACCATCGGTTCCGCAGCAACAACAGCCAGCACAACCAACGAACAACCAACCGACGATGGTGGCTACCAACTCCCGTCCACCAGCAGCCAATTCACCGCAAACCGGCAACGTGTTAGTGCAACGAACGGAAGCAAATACGGCTGCGATCGTGCAATCCCCTGGCCAGTCCACGATCGTGAACAACACCAGCTCGCTAGCTGCCAAACACTTTCAGCAGCAGCAGGTACTGGAGAGCGAACAGTTTGCGAGCGCCTGGCTGAAGGCAACGTTCGAGCTGCATTCCGCTCCAGCCATTCGCACCGATCAGCAGGAGGTGTACAAGCTGTACATGGCAACGAATGCAAAGCTCGGACGGAAGGTGATCGTACCGGTGCCTCACTTTCCGCGCTGCGTCCGTGGCGTGTTCGGTGCGACCGTTGGTCCGGTCCAATTCAAGATCGAGCAAAATGGTGTCGAATCCATCAGTACTTTCTACGAGGGTCTAAAGATGCGCGCCAAACCCTTACCGATCGTACACAAGGGTACAGTACTGACACCGAATATAGAGTACGTAACGGCACCTAGCTCCAATTCCAACAGTACACCTACACAGTGTAAACCAGCAACAGCAGCAGCACCTATCGATCCGCCGGCAGGACCAGTGATGAACAACATTTCGATGGTCACTAGCAGCAGTGTAACCACAACCACTGTTACCATTGCCTCCATCGGCACTAACCAACAACAGGCAACAATCATCAGCAAACCGTTCGCAAACGTTGGCACTACGTCCACCACGTCATCCGCTACCTCACTCGCTACACTCTCCACTGCGATCACATTCGAACCTACAGCAAGTGGTGGCCGTTCATCGTTTGGATCGCCCGTTGTCTTTTCCACCGCTAAAGGACAGCCATCACTGCCAATGCCATCGCTTACCTTCACAACACCCTCGAGCTTTGCTGCGATCCGTACGTCATCCGTCATAGCGTCAACTCAGGCTGCGATAACACCGGTTTGTCAGTCAACCGTTTCTGTAGTTCCAAAGGGAACCCCTATAGTGTCCGGAGCGACGAAAACAACACAACTATCAAAGCATCTAGTTCCTTTCAGTGCCGGACAGGCGACAGTAACGGTGACATCCGGAACCGGCAACAAACCGCAGCAGCAACAGCCACAGCTGCTCGTAACTCAACTTGGGGGCAAAAGTGTGGTTTTCAATCAGGCAGCAGCATCAACCGGTGGTCACCAGAATCAGTATCTACCGACGACACCATCCTCGCCTTTGCTACAGCAGGTGCTTAGTGGCGATCAGAAGAGCAATGTTATCGTGGTCAACCAGACGACCATTTCACCGCAACCGCAGGCCAGCACCAGTGTCCTTCAACAtccgcaacagagcggacaagtagtacagcaccaacagcagcagcaacaacagcaacatcagcttcagcagcagcaTCTTGGACCAGCCCATCATCAGACTACCGGAGGTAACGGTACGACCACGATCATGAACCAGTCGGGCACGATCTCCTCAACCACGACCAATCCGTCCGCGCTCATCAAGAGCCTGCTAGCGAACAAGGTAACGACGAGCGCGGTCACCGAAAGCACGTTCGCATccgccgtcgcccctgccgctgctgctgctgccgtcgccgccgctgctgctACTTCCAGTAGTTTGTCCACTAGCAACATAACCACCACTAGCATCAGCCAACCTCCTACTACCAATTGTTTGATTGCACCGAATGTGAATGTGCGTCAGGTTGTCCAAAGACAGCAGCTAATGAAACAAAAGCAGCTGATTGATCAAAAACTACCGATCGGAACGAACCAAGCGTCGGTGGTGGTCACATCGAACAATCCACACAATCTGACCAACATTAAGGTAGGCAACTCGACCATCTCCATCAAACCGGGTACGCTGCCAACGAACACTGTCATCACGGCGACCAACCCGCACGAAGCGCTCAATGCACCGCCACCATTAGCCCCGCTTAGCCAACCGTTGGGTGGCCAAGGTACGATAATCAAAACCATCACCCCCGCAGACACGACGGCTCAGTTGCACCAGCAGAAGTTGCTTCCCAACAAAGTGCTATCGGAGCTGCTGGAGAAGAAACCGGGCGAAATCATTATCGCCGGTGAGACGACAATCAAGCGAAAGATTGATAACGATGTGTCGATCGAACCGCCGGTCAAGCGCATGGAAGTGCAAATGCAGAGCGATGGCAAGCTAAAGGCAGCTGATCTGTATGCCGAACTGGCCGGATCCATATTAGCAGGCGAGGAGCTGGAGGATGCAGATGCACGATCGGCACGAGAGGCCGaacagcagaaacagcagaagcttcaacagctccaacagcaacaacagcagcagcagcagcaacaacaacaacaacaacaactgctacagcagcagcagcaacagcaacagcaacagttacaacaacaacagcaaatacaacagcaaatccagcagcagcaacaacaacaactgctacagcagcagcaacaacaacagcaacaacagcaacagcaatttttacagcaacaattacaacagcagcaacaacaacagcaacagcaacaacaacagcagcagcagcagcagcaagTGATTTCCGTTCCAGTACCATTACAACGCCAAATTATAGTCACTCCGAGCAGCAGTAACCAGCAGATGATCATATCCGCACAACCTTCCGTGGTTAGCACGCATCCGCAGCAGCAACACCTGACAACGCAGACGACGGCAACGATCAAAACAGACACCGGTTACCAAACCGTTCCGATTATCTTGCAGCATAATCCATCAGGAATGGGGCCAGGATCGCTGCAGATTCAGAAAGCGACGACAGCACCAGGCGGGGCGATTGTTCAACCAGCTATAATGGCACCTCAAGCATCAGCACCTACGCAGTACATACTGGCCACCAATCAGCAAGGTCAAACGTACGTCGTGGCCCAACAACCGCAGCAAGTTCAGCCACAGCTTCAGCAAACCGTGCTGCTCGCCCAAGCACCTACCCCACAGCATCAAATCGTTGCCCAGCAACAGCACGGTACACAGCAAAAGACAATCATTATCGTacagcaaccacagcaacaaccacagcagcagcagcagcagcaacagcCAACGGTTGTAAACCAGCAAACGCTCCAAGCCCAACAGATTGCTGCCCTTCAGGCACAGACCTCCGGAACACAGAAAATTTTTGTAAATCAGCAAGGGCAACAAATTCTAATGACACAGCTACCACGCCAAGTTATCGTCAGCCATGCCGGTGTTGGTGTCCCATCATCGGCGGGTAACACTGCTGGTACGGCCATTTTTACGTCGGCCGCGCTATCGTCGCATCTTTCGGTCGCACCAACAACATCTACGGCCGCTATGCTGTCGGCAGGTGTCGCATCATCGCCTGGCAGCAGCACCATTATTGAAAAGAAGCCGATCTACTTCACGACCAATGCTCAGGGTAATACGATTAGCTTCGAAGGACCACCGCAGCAGTTGCAGGTCCAAACGACGGCCGGCGGACAGCTCCAGCTGAAACCATTCGGACAGGGAACACAGGTCGTTAGTGCCGCAGGCCATATAATACAACAATCTGCCCTGGGCAGTTCTACGGGCGGGCAACAGACGATACAATTCATCCAGCAAGCAATGCCTTCTcagcaacagcaccagcaacagcaacCGACACAACAGATCGTGTTCCAATCACAGTCCGCAACCGGTCCGGCACAGATCATACAACAACAGATCATCCAACCAGCCCCGGGTCAACAGGCGCAACAGATCGTACAGAAAGTGCTCCAGCAGCAGCTAGTACAAGCGGGTAAACCAAACCAGACCCAGATAATAACGGTACAGAAGCAACAGCAACCGCTGCAGCCACAGCAACACCAACAACAGCAATCCGTAGCAATTGTGCAGCAACAAACAGGCATTTCCATCCAGCGGCAACCAACGGGTACTATGCTTCCGACTAAAACGGTTACATTGCCTACTACGCCGAAAGGGCAGATCATACAAGTAGTACAACAGAAGCTAACGAACCCTGCTACGACCGTTcaacagcatcaattgcaacagcaccagcagcagcagcaacagcagcagacagcaacagcaacagcaacagcaacagcaacagcaacaacaacaacagcacaacagcagcagcagcagcagcagcagcagcagcatcagcatcagcaacagcagccacagcagcagcagcaTGCTATGGTAGTTCAACCTCGGGCTATCCTACCGCCCGTCCCACAGTCGACTACGATCACACAAACGATGGTAGTACCGGTGAGTGGTTCGAGTGGAGCACCGACGCCAACACCGGCACCAATTCAATCGATTTCGGTAACACCGATTCAAACGCCAGCACCACCAGCCACAGCTGTCGTACCGGTCACTGGTGCCCCTGCTACATCAGCACCAGTGACAACTGCTCCGCAACCACAGCCAACGCGAACGCCACCAGCAACCGCCCCTGTACAACAAGCTGCGCAGCAACCAACGGCCCCCACCACACCAGTACCCGTTGGCAGTGCCTCACCAGGTGTAACGACAATCGTTAGCGCCACACCCGGCATCCAGATGATTCCTCCGCCGGACGAGCTGAAACACGTCGAAGCGGAGGATGTTGATCCAAGCTGGCCCTGGGTTTGCGATTGGCGTGGCTGCCCGAGGAAGAAGTTCGCATCGGCGGCGGAAGTGTTCCGGCATGCTTGTAACGTACATTGCCCTAGCAACGTTGATATCAGCGCCGACATCTACTGCCAATGGGGTCCGGGACCTACCTTGTGTGACAATTTACCTCGTAAGCGCTTCTCGCTGATGACGCACATTCAGGATCGCCATTGCACCATAGAGGCTTTCAAAGCGGCCGCTCAACGTAGGATTGCTGGAGGTACACCAGCAACTGCTCAACCGTATCCCGTTACACTGATTCGTCATACGGGAACCGGTACAGGAAGCACGACTAACCGTGGCTCATCAGCAAGCAGTGCCACGATAGCTAGTCCAACCGGCAGTCCGGGTGGTGGAAGAGGATCACCAGCGCCTGCCACGTGTACGAAGATTGATACCTCTGGCGGAACGGGTGGGAATGGTGAGGCGGGAAGCTCATCGGGAAATGGCAACAGTGGTCCAGGATTGCTTTCTGCTGCCGGACCGGCCGCCCTACATGCCATCAAGCGTCACACTATGGATTACGTCAATTCGAAAGAATTGCAGGATGAAATGGAGGGTCCGGTGACGAAAAGTATTCGGCTAACATCCGCCCTGATTTTGCGCAATCTCTGCGTGTACAGCAGTTCGGCCAAGAGGCTTCTGCGATCGTACGAAGGACACCTGGCCGGAGTAGCCCTGAGTAATGTCGAGTCGGGTCGAACAGTGGCGCAGCTGCTGTTCGAAATCAACGATACACAACCGAATTATTGA
Protein Sequence
MMEGVKIERILANAADDSSNTNDAASMINANATGNPVTSGGVTSLIMVPFTPSTPGKESVRPQNVRRSAPAKPTFEKDKYSFLCDLQMFHDKNGTPYTKLPKISGREVDLHKLYSVVISRGGWMKVNAREDWDEVIEELELPMRCVNNEIALKQIYIRFLDRYERVNFHGEDKDPAEDEDDEKRLHRRWSVRALHSMPSVYNHHQHNVPDALRSSLKLSDDLYRASEYDKLILSLLSPLPNEQDFAINVCTLMSNENKHTLHIDRCPRLVYALLAHAGVFNHFTLRDTFNEYYSNIRKNSLQRFWKECLFEKPQVLELSLEDCFAKMGTDPSALIASIYQDEEELEREKAENADDALDSGGDQNDGRSRLSMATLRTFLSLGTGLGTNDYIGQRVLQIAAIFRNLSFNEENLSLLGRNRTFVRFLIMCANARWNNLHHMGLDMLGNIAHDIDLNDPQSDEVTRCLLSTLSEGLEGADRGVIISCLEVLSKIAQKESNEDTLNRCLNQELYNQITLFLCLNDIMLLLYTLECIYSLTSMGEKPCHAIMHIRGVLETLVSLVTVEAQSYGPDACILMRVVETIPGNIATGQQQAPYHGTAVPGSATTMAQLTVHKDPPHGSPATGVPYPTQETPKHHMVNSNNPLVAAAAAGNKPMPALSIPSVPQQQQPAQPTNNQPTMVATNSRPPAANSPQTGNVLVQRTEANTAAIVQSPGQSTIVNNTSSLAAKHFQQQQVLESEQFASAWLKATFELHSAPAIRTDQQEVYKLYMATNAKLGRKVIVPVPHFPRCVRGVFGATVGPVQFKIEQNGVESISTFYEGLKMRAKPLPIVHKGTVLTPNIEYVTAPSSNSNSTPTQCKPATAAAPIDPPAGPVMNNISMVTSSSVTTTTVTIASIGTNQQQATIISKPFANVGTTSTTSSATSLATLSTAITFEPTASGGRSSFGSPVVFSTAKGQPSLPMPSLTFTTPSSFAAIRTSSVIASTQAAITPVCQSTVSVVPKGTPIVSGATKTTQLSKHLVPFSAGQATVTVTSGTGNKPQQQQPQLLVTQLGGKSVVFNQAAASTGGHQNQYLPTTPSSPLLQQVLSGDQKSNVIVVNQTTISPQPQASTSVLQHPQQSGQVVQHQQQQQQQQHQLQQQHLGPAHHQTTGGNGTTTIMNQSGTISSTTTNPSALIKSLLANKVTTSAVTESTFASAVAPAAAAAAVAAAAATSSSLSTSNITTTSISQPPTTNCLIAPNVNVRQVVQRQQLMKQKQLIDQKLPIGTNQASVVVTSNNPHNLTNIKVGNSTISIKPGTLPTNTVITATNPHEALNAPPPLAPLSQPLGGQGTIIKTITPADTTAQLHQQKLLPNKVLSELLEKKPGEIIIAGETTIKRKIDNDVSIEPPVKRMEVQMQSDGKLKAADLYAELAGSILAGEELEDADARSAREAEQQKQQKLQQLQQQQQQQQQQQQQQQQLLQQQQQQQQQQLQQQQQIQQQIQQQQQQQLLQQQQQQQQQQQQQFLQQQLQQQQQQQQQQQQQQQQQQQVISVPVPLQRQIIVTPSSSNQQMIISAQPSVVSTHPQQQHLTTQTTATIKTDTGYQTVPIILQHNPSGMGPGSLQIQKATTAPGGAIVQPAIMAPQASAPTQYILATNQQGQTYVVAQQPQQVQPQLQQTVLLAQAPTPQHQIVAQQQHGTQQKTIIIVQQPQQQPQQQQQQQQPTVVNQQTLQAQQIAALQAQTSGTQKIFVNQQGQQILMTQLPRQVIVSHAGVGVPSSAGNTAGTAIFTSAALSSHLSVAPTTSTAAMLSAGVASSPGSSTIIEKKPIYFTTNAQGNTISFEGPPQQLQVQTTAGGQLQLKPFGQGTQVVSAAGHIIQQSALGSSTGGQQTIQFIQQAMPSQQQHQQQQPTQQIVFQSQSATGPAQIIQQQIIQPAPGQQAQQIVQKVLQQQLVQAGKPNQTQIITVQKQQQPLQPQQHQQQQSVAIVQQQTGISIQRQPTGTMLPTKTVTLPTTPKGQIIQVVQQKLTNPATTVQQHQLQQHQQQQQQQQTATATATATATATTTTAQQQQQQQQQQQHQHQQQQPQQQQHAMVVQPRAILPPVPQSTTITQTMVVPVSGSSGAPTPTPAPIQSISVTPIQTPAPPATAVVPVTGAPATSAPVTTAPQPQPTRTPPATAPVQQAAQQPTAPTTPVPVGSASPGVTTIVSATPGIQMIPPPDELKHVEAEDVDPSWPWVCDWRGCPRKKFASAAEVFRHACNVHCPSNVDISADIYCQWGPGPTLCDNLPRKRFSLMTHIQDRHCTIEAFKAAAQRRIAGGTPATAQPYPVTLIRHTGTGTGSTTNRGSSASSATIASPTGSPGGGRGSPAPATCTKIDTSGGTGGNGEAGSSSGNGNSGPGLLSAAGPAALHAIKRHTMDYVNSKELQDEMEGPVTKSIRLTSALILRNLCVYSSSAKRLLRSYEGHLAGVALSNVESGRTVAQLLFEINDTQPNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00091966;
90% Identity
-
80% Identity
-