Basic Information

Gene Symbol
ARID2
Assembly
GCA_013758885.1
Location
NC:59474094-59483834[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-24 3.2e-21 74.9 0.0 2 89 75 160 74 160 0.94
2 2 7 1.1e+04 -9.4 7.8 53 53 1471 1471 1440 1512 0.53

Sequence Information

Coding Sequence
ATGATGGAAGGTGTGAAAATAGAGCGGAGCCAGCCGAACGCCGCCGAACCTGGCGACGCCAGCATGATGatcaacgcaaacgcaaccgGCAATCCGGTACCCTCCGGAGGGGGTACCTCCCTGATCATGGTGCCCTTTACTCCCAGTACCCCCGGGAAGGAATCCGTAAGACCGCAGAACGTGCGCCGGTCGGCACCGGCCAAACCGACGTTCGAAAAGGACAAGTATAGCTTCTTGTGCGATCTACAGATGTTCCATGACAAGAATGGGACACCATACACGAAACTTCCCAAAATTAGCGGCCGAGAAGTCGATCTACACAAACTCTACTCGGTCGTTATCAGTCGCGGAGGATGGATGAAGGTTAATGCCCGGGAAGACTGGGACGAGGTGATCGAAGAGCTGGAGCTACCGACTCGCTGCGTAAACAGCGAGATCGCCCTGAAGCAGATCTACATTCGCTTCCTGGACCGATACGAACGCGTCAACTTCCATGGCGAGGATAAGGATCCGGCcgaggatgaagatgacgagAAGCGATTACATCGGCGCTGGTCCGTTCGGGCGCTTCACTCAATGCCGAGCGTCTACAACCATAACCAGCACAACGTGCCGGATGCGCTGCGATCATCGCTCAAGCTGTCGGACGATCTGTACCGTGCCTCGGAGTACGATAAGCTAATCCTTTCCCTGCTATCGCCGCTCCCGAACGAGCAGGACTTTGCGATTAACGTGTGCACGCTGATGTCGAACGAGAACAAGCACACACTGCACATCGATCGGTGTCCACGGCTAGTATACGCATTGTTGGCGCACGCCGGCGTTTTCAATCACTTCACGCTGCGCGATACATTCAATGAATACTACTCGAACATCCGCAAGAACTCGCTGCAGCGCTTCTGGAAGGAGTGTTTGTTCGAAAAACCGCAAGTGCTGGAACTGTCGCTGGAGGATTGTTTCGCCAAGATGGGCACCGATCCGAGTGCTCTTATCGCCAGCATCTACCAGGATGAAGAGGAactggaaagagagaaagcagaaaatgctgatgatgcactCGATGTTGGTGGCGACCAGAATGACAGCCGAAGTCGCTTAAGCATGGCCACGTTGCGTACCTTTCTCAGTCTGGGCACGGGGCTGGGAACCAATGATTACATCGGCCAGCGGGTGCTTCAGATTGCGGCGATCTTTCGTAACCTAAGCTTTAACGAGGAAAACCTATCGCTGCTTGGCCGCAACCGTACCTTTGTCCGGTTTCTCATCATGTGTGCCAACGCGCGCTGGAACAATCTACACCACATGGGGCTCGATATGCTCGGTAACATTGCGCACGATATCGATCTGAACGATCCGCAGTCGGACGAGGTGACACGTTGCCTGCTGTCCACTCTCTCGGAGGGACTGGAGGGCGCCGATCGTGGTGTGATCATCAGCTGTCTCGAGGTGCTTAGTAAGATCGCGCAAAAGGAATCCAACGAGGACACCCTGAACCGGTGCCTAAACCAGGAGCTGTACAATCAAATCACACTGTTTCTCTGCCTGAACGACATCATGCTGCTACTGTACACGCTCGAGTGTATCTACTCGTTGACGTCGATGGGCGAAAAGCCCTGCCAGGCGATCATGCACATCCGGGGCGTACTCGAGACGCTGGTTTCGCTGGTGACGGTCGAAGCGCAAAGCTACGGTCCCGATGCATGTATTCTGATGCGCGTGGTTGAAACCATTCCAGGCAATATTGCTACGAACCAACAGCAGGCACCATACCATGGAACCACAGTACCCGGTACGGCAACCACGATGGCTCAGCTTACCGTGCACAAGGATGCATCGCATGGATCCACTGCTACCGTTGCCGCGTACCCGACACAGGAAACTCCAACAAAACATCATATGATCAACAGCAATAACCCGTTGgtaggtgctgctggagcgcccGGGAACAAACCGATGCCCGCGCTATCGATACCATCAGtgccgcagcaacaacagccagcaCAAGCAGCGAACAACCAAACGACGATGGTGCCTGCCAGCAACCGTCCACCAGGGGCCAATTCACCGCAATCCGGTAGCGTGCTGGTGCAACGGACGGATGCAAACACGGCCACCATCGTTCAATCGCCTGGCCAGCCCACGATCGTGGGTAACACCAGCTCGCTAGCCGCCAAacactttcagcagcagcaggtattGGAGAGTGAACAGTTTGCGAGCGCCTGGCTGAAGGCAACGTTCGAGTTACACTCCGCCCCAGCTATCCGCACCGATCAGCAGGAGGTGTACAAGCTGTATATGGCGACGAATGGAAAGCTCGGACGGAAGGTGATCGTACCGGCACCGCACTTTCCGCGCTGCGTCCGTAGCGTGTTCGGTGCGTCCGTTGGACCGGTTCAATTCAAGATCGAACAGAACGGTATCGAATGCATTAGTTCGTTCTACGAGGGGCTAAAGATGCGCGCCAAACCCTTACCGATCGTACACAAAGGGACAGTGCTGACACCGAACATAGAGTACGTAACGGTAGctagttccagttccagcagcacTTCTGCACAGTGCAAAGcgacaggagcagcaacaacatcagcagctaATGATCCCCCCGGACCGGTGAACAGCATTTCGATTatcactaccagcagcataaCTACCACTACTGTCACCTTTGCCTCGCTCACCACGAACCCGCAACAGGCAACGATCACTAGCAAACCGTTCGCTAGCGTCGGTACCACGTCCACCATGTCATCGGCTTCCTCACTCGCAACACTCTCCACGGCAATTACCTTCGAACCTACAGCAACGGGTGCCCGTTCATCGTTTGGATCGCCCGTTGTCTTTTCCACCGCCAAAGGACAGCCATCACTGCCAATGCCATCGCTTACCTTCACAACTCCTTCGAGCTTTGCTGCGATCCGTACATCGTCCGTCATAGCGTCAACTCAGGCTGCGACAACGCCAGTTACTCAATCGACCATTTCAGTCGGTCCAAAGGGAGCGCCAATGGTGTCCGGAGCGGTGAAAACCACTCAGCTGGCTAAGCACCTAGTTCCTTTCAGTACAGGGCAGGCAACAGTAACTTTGTCGCCCGGAACCGGCAACaaatcgcaacagcagcagcagcagcagcagttgctcgTAACTCAGCTTGGGGGCAAGAGTGTGCTTCTCAATCAGACAGCAGCGTCATCCGGTGGTCACCAGAATCAGTACCTACCGACGACACCATCCTCGCCTTTGCTGCAGCAGGTGCTGAGTGGCGATCAGAAGAGCAACGTTATCGTGGTCAACCAGACGACCATTTCACCGCAACCGCAGGCCAGCGGCAACagtgtgctgcagcatccgCAACAGAGTGTGCAAATAgtgcagcaccaacaacaacaacaacagcaacaacatcagctgcagcagcagcatcacggaaCACCTCAACATcaaaccaccggtggtggtaacggCACGACAACGATCATGAACCAGTCGGGCACGATCTCCTCTACCACGACCAATCCATCCGCGCTCATCAAGAGCCTACTGGCGAACAAGGTAACGACGAGCGCGGTCACCGAAAGCACGTTCGCCTCCGCcgtcgctcctgctgctgctgctggtgctgctgccgccgccactgctgccgctacttCCAGTAGTTTGTCCACTACCAACATAACCACCACTAGCATCAGCCAACCTCCTACTACCAATTGTTTGATTGCATCGAATGTGAATGTGCGTCAGGTTGTCCAAAGGCAGCAGCTgatgaagcaaaagcaacTGATCGATCAAAAGCTACCGATCGCAGCGAACCaagcgtcggtggtggtcacCTCGAACAATCCACACAACCTAACCAACATTAAGGTAGGCAACTCGACCATTTCCATCAAACCGGGTACGCTGCCAACGAACACCGTCATCACGGCGACCAACCCGCACGAAACGCTTaacgcaccgccaccactggcaccactTAGCCAACCATTGGGTGGCCAGGGAACGATTATCAAAACGATCACCGCCGCAGACACGACGGCACAGTTGCACCAGCAAAAGTTGCTGCCCAACAAGGTGCTATCGGAGTTGCTGGAGAAGAAACCGGGTGAGATTGTCATCGCTGGTGAGACAACGATCAAGCGAAAGATTGATAACGATGTGTCGATCGAACCGCCGGTCAAGCGCATGGAAGTGCAAATGCAGGGCGATGGCAAGCTAAAGGCAGCGGATCTGTATGCCGAACTGGCCGGATCCATATTAGCCGGCGAGGAACTGGAGGATGCCGATACACGGTCGGCTCGAGAGGCcgaacagcagaagcagcagaaacttcAACagctccaacaacaacagcaacagcaacaactgttacagcagcagcaaatacaacaacaaatccagcaacagcagcagcaacaacagcaacaacagcaaatacagctgcaacagcaacaacagcaacaacagcaatttttgcagcaacaattacagcagcagcagcagcaacaacaacaacagcagcagcagcagcaacagcaaatgatTTCCGTGCCAGTACCATTGCAACGGCAAATTATCGTCACCCCGAGTAGCAGTAACCAGCAGATGATCATATCCGCGCAGCCTTCCGTGGTTAATACGcatcctcagcagcagcacctgacAACGCAGACGACGGCAACGATCAAAACGGATACCGGGTATCAAACCGTGCCTATTATCTTGCAGCATAACCCATCAGGACTGGGAACAGGATCATTGCAGATTCAGAAAGCAACAACGGCACCAGGCGGAGCAATCGTTCAACCGGCCATAATGGCTCCCCAAGCATCAGCACCTACGCAGTACATACTGGCCACCAATCAGCAAGGCCAAACGTACGTCGTGGCCCAACAGCCGCAGCAAGCGCAGCCACAGCTTCAGCAAACCGTACTGCTCGCTCAGGCACCTACCGCACAGCATCAAATCGTtgcccagcaacagcacggcaCACAGCAAAAGACAATAATTATCGttcagcaaccacagcagcaaccgcagcaacagcagcaacagccaacgGTCGTAAACCAGCAGACACTGCAGGCTCAACAGATTGCTGCCTTGCAAGCGCAGACCCCCGGGACGCAGAAAATATTCGTCAATCAGCAAGGGCAACAGATTCTAATGACGCAGTTACCGCGCCAGGTTATCGTCAGCCATGCCGGTGTTGGTGTCGCATCGTCGGCAGGTAACACTCCCGGTACGGCCATTTTCACTTCGGCCGCACTATCGTCGCATCTGTCGGTTGCGCCCACAACATCTACGGCCGCTATGCTGTCGGCGGGAGTGGCCCCTTCACCTGTCGGCAGCACCATTATCGAGAAGAAACCGATCTACTTCACGACCAACGCTCAGGGTAACACGATTAGCTTCGAAGGGGCGCCGCAGCAACTACAAGTCCAAACGACGGCCGGTGGACAACTCCAGCTGAAACCGTTCGGACAGGGAACTCAGGTCGTTAGTGCAGCAGGCCATATAATACAACAATCTGCCCTCGGTAGTTCTACTGGTGGACAACAGACGATACAGTTCATTCAACAAGGAATTcctgctcagcagcagcaacaacaacagcaaccgacaCAACAGATTGTGTTCCAATCACAATCCGCAACCGGTCCGGCACAGATCATACAGCAACAGATCATCCAACCAGCCCCTGGTCAACAGGCGCAACAGATTGTGCAGAAagtgctccagcagcagctggcacatgcagccaaaccgaaccaaacgcAAATAATCACCgtacagaagcagcagccacagctgcagcaacaacagcagcagcagcaatccgtAGCAATcgtgcagcaacaaacaggCATTTCCATTCAGCGACAACCAACGGGCACTATACTTCCGACAAAAACCGTTTCACTGCCTACTACGCCGAAAGGACAAATCATTCAAGTCGTACAACAGAAGCTGACGAACCCTACTACgaccgttcagcagcagcagcagcaacagttgcaacaacagctgcagcaacagcaacaacagcaacatgctATCGCGGTTCAACCACGCCCTATCCTACCGCCGGTACCACAGTCGACTACGATCACACAAACGATGGTAGTACCGGTGAGTGGTTCCAGTGGAGCACCGacaccaacaccggcaccaaTTCAATCGATTTCGGTAACACCGATCCAaacgccaacaccaccagccacaCCAGTCGCAGCGGTCcctgctgcaccggcaccagcgataccggcaccacaaccacaaccagcggcaacgccaccagcaaccgcccCTGTACAACAAGCTGCACAACAGTCGGCTGCCCCCACCACACCGGTACCAGCAGGCCGTGCCTCACCAGGCGTAACGGCGGTCGTTAACGCGACACCCGGCATCCAGATGATTCCTCCGCCGGACGAACTGAAGCACGTCGAAGCGGAGGATGTTGATCCAAGCTGGCCCTGGGTTTGCGATTGGCGTGGCTGCCCGAAGAAGAAGTTCGCATCGGCAGCGGAAGTGTTCCGGCATGCGTGTAACGTTCACTGCCCTAGCAACGTTGATATCAGCGCCGACATCTACTGCCAGTGGGGTCCAGGACCTACCTTGTGTGACAATTTACCCCGCAAGCGCTTCTCGCTGATGACGCACATTCAGGATCGCCATTGCACCGTGGAGTCTTTCAAAGCGGCCGCTCAGCGTAGGGTTGCTGGAAGCACACCAGCAAGTGCTCAACCGTATCCCGTTACACTGATCCGCCATCCGGGAACAAGTACCGGAAGTGCGGCTAaccgtggagcagcagcaaacagtgcCACAACAGCTAGCCCAACCGGCAGCCCCGGTGGTGGAAGAGGATCACCAGCGCCGGCCACGTGTACGAAGATTGATACCTCGGGTGGAACGGGTGGGAGCAGCGAGGGAGGCAGCACTTCGGGAAGTGGTAACAGTGGTCCAGGACTGCTTTCTGCTGCCGGACCAGCCGCCCTACACGCAATCAAGCGCCACACGATGGATTACGTCAATTCGAAAGAATTGCAGGATGAGATGGAGGGTCCGGTGACCAAGAGTATTCGGCTAACATCCGCCCTGATTCTGCGCAATCTCTGCGTGTACAGCAGTTCGGCCAAGAGGCTTCTGCGATCGTACGAAGGACACCTGGCTGGAGTGGCCCTCAGTAATGTCGAATCGGGTCGAACGGTGGCGCAACTGCTGTTCGAAATCAACGATACGCAGCCGAACTATTGA
Protein Sequence
MMEGVKIERSQPNAAEPGDASMMINANATGNPVPSGGGTSLIMVPFTPSTPGKESVRPQNVRRSAPAKPTFEKDKYSFLCDLQMFHDKNGTPYTKLPKISGREVDLHKLYSVVISRGGWMKVNAREDWDEVIEELELPTRCVNSEIALKQIYIRFLDRYERVNFHGEDKDPAEDEDDEKRLHRRWSVRALHSMPSVYNHNQHNVPDALRSSLKLSDDLYRASEYDKLILSLLSPLPNEQDFAINVCTLMSNENKHTLHIDRCPRLVYALLAHAGVFNHFTLRDTFNEYYSNIRKNSLQRFWKECLFEKPQVLELSLEDCFAKMGTDPSALIASIYQDEEELEREKAENADDALDVGGDQNDSRSRLSMATLRTFLSLGTGLGTNDYIGQRVLQIAAIFRNLSFNEENLSLLGRNRTFVRFLIMCANARWNNLHHMGLDMLGNIAHDIDLNDPQSDEVTRCLLSTLSEGLEGADRGVIISCLEVLSKIAQKESNEDTLNRCLNQELYNQITLFLCLNDIMLLLYTLECIYSLTSMGEKPCQAIMHIRGVLETLVSLVTVEAQSYGPDACILMRVVETIPGNIATNQQQAPYHGTTVPGTATTMAQLTVHKDASHGSTATVAAYPTQETPTKHHMINSNNPLVGAAGAPGNKPMPALSIPSVPQQQQPAQAANNQTTMVPASNRPPGANSPQSGSVLVQRTDANTATIVQSPGQPTIVGNTSSLAAKHFQQQQVLESEQFASAWLKATFELHSAPAIRTDQQEVYKLYMATNGKLGRKVIVPAPHFPRCVRSVFGASVGPVQFKIEQNGIECISSFYEGLKMRAKPLPIVHKGTVLTPNIEYVTVASSSSSSTSAQCKATGAATTSAANDPPGPVNSISIITTSSITTTTVTFASLTTNPQQATITSKPFASVGTTSTMSSASSLATLSTAITFEPTATGARSSFGSPVVFSTAKGQPSLPMPSLTFTTPSSFAAIRTSSVIASTQAATTPVTQSTISVGPKGAPMVSGAVKTTQLAKHLVPFSTGQATVTLSPGTGNKSQQQQQQQQLLVTQLGGKSVLLNQTAASSGGHQNQYLPTTPSSPLLQQVLSGDQKSNVIVVNQTTISPQPQASGNSVLQHPQQSVQIVQHQQQQQQQQHQLQQQHHGTPQHQTTGGGNGTTTIMNQSGTISSTTTNPSALIKSLLANKVTTSAVTESTFASAVAPAAAAGAAAAATAAATSSSLSTTNITTTSISQPPTTNCLIASNVNVRQVVQRQQLMKQKQLIDQKLPIAANQASVVVTSNNPHNLTNIKVGNSTISIKPGTLPTNTVITATNPHETLNAPPPLAPLSQPLGGQGTIIKTITAADTTAQLHQQKLLPNKVLSELLEKKPGEIVIAGETTIKRKIDNDVSIEPPVKRMEVQMQGDGKLKAADLYAELAGSILAGEELEDADTRSAREAEQQKQQKLQQLQQQQQQQQLLQQQQIQQQIQQQQQQQQQQQQIQLQQQQQQQQQFLQQQLQQQQQQQQQQQQQQQQQMISVPVPLQRQIIVTPSSSNQQMIISAQPSVVNTHPQQQHLTTQTTATIKTDTGYQTVPIILQHNPSGLGTGSLQIQKATTAPGGAIVQPAIMAPQASAPTQYILATNQQGQTYVVAQQPQQAQPQLQQTVLLAQAPTAQHQIVAQQQHGTQQKTIIIVQQPQQQPQQQQQQPTVVNQQTLQAQQIAALQAQTPGTQKIFVNQQGQQILMTQLPRQVIVSHAGVGVASSAGNTPGTAIFTSAALSSHLSVAPTTSTAAMLSAGVAPSPVGSTIIEKKPIYFTTNAQGNTISFEGAPQQLQVQTTAGGQLQLKPFGQGTQVVSAAGHIIQQSALGSSTGGQQTIQFIQQGIPAQQQQQQQQPTQQIVFQSQSATGPAQIIQQQIIQPAPGQQAQQIVQKVLQQQLAHAAKPNQTQIITVQKQQPQLQQQQQQQQSVAIVQQQTGISIQRQPTGTILPTKTVSLPTTPKGQIIQVVQQKLTNPTTTVQQQQQQQLQQQLQQQQQQQHAIAVQPRPILPPVPQSTTITQTMVVPVSGSSGAPTPTPAPIQSISVTPIQTPTPPATPVAAVPAAPAPAIPAPQPQPAATPPATAPVQQAAQQSAAPTTPVPAGRASPGVTAVVNATPGIQMIPPPDELKHVEAEDVDPSWPWVCDWRGCPKKKFASAAEVFRHACNVHCPSNVDISADIYCQWGPGPTLCDNLPRKRFSLMTHIQDRHCTVESFKAAAQRRVAGSTPASAQPYPVTLIRHPGTSTGSAANRGAAANSATTASPTGSPGGGRGSPAPATCTKIDTSGGTGGSSEGGSTSGSGNSGPGLLSAAGPAALHAIKRHTMDYVNSKELQDEMEGPVTKSIRLTSALILRNLCVYSSSAKRLLRSYEGHLAGVALSNVESGRTVAQLLFEINDTQPNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00098259;
90% Identity
-
80% Identity
-