Basic Information

Gene Symbol
sip1
Assembly
GCA_943734635.1
Location
OX030880.1:52464775-52467297[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.9e-96 5.4e-92 308.1 7.2 1 275 414 681 414 681 0.98

Sequence Information

Coding Sequence
ATGGAAAACGATGAGTACGAACGTTTCGAAATAACAGACTACGATCTGGCCAACGAGTTCAATCCCAACCGTGGACGGCGTCGGCCAACGAAGAACCAGCAAATTTACGGCATTTGGGCTGATGACTCAGAAAATGAGTACGGAGACGACGATACTTCGGCTGGAGTTGGTCGGAAGCGGACCAGTAAGAAGCCGAAAGACTACACGGCACCGATCGGATTCATTGCCGGCGGTATTCAGCAATCGGGCAAGAAACCGGAAGCCAAGAAACAGCAACACACCGGCGAAGACGAGGATGGCGAAGAAGAAAGCGACGACGAAGAAGGGACGGCTAGACCGCAGTTCGATCGGAAGGCCAGCAGCAGCACGTCGGAATCCGAGTCGGACTCGGCCGAGAAACCATCTCACAACGATCTCCGGTCAATGGCCGGCTTTCGCAGTTTCAGCAAACCGGGGCCAACGACGGGCAAAGGCGTTGGCAACTGGGAACAACACACTCGGGGCATCGGAGCAAAGTTGCTCCTGCAGATGGGCTATCAGCCCGGCAGAGGATTGGGCAAGGATCTGCAGGGCATATCGGCACCAGTCGAGGCCCACCTGCGCAAAGGGCGCGGAGCGATCGGTGCCTATGGACCGGAAAAGAAAACCACCGTAGCCGACGCTAAACAACAAAAAGCGCCCAAACACGACGAACAGAAGGGCGCCGAAAAAGCGGACGAGGGCCAACAGTGGCGTAAAGCAAAGGAGGGAAAACTTGGCAAGAACCGTTACTTTTACAAAACGGTTGAAGATGTGATCGAAAAGGGCAAAAAGACGACGACGGCAACTTATGCTCCTTTCGAGAAATCGTCCAAGCTGAGTCAAGTGACGGTGATCGATATGACGGGACCGGAAAAGCGGGTTCTTAGCGGCTATCACGCACTCGGTCAGGCGAGGGTGGCGGATGAAGAGCTGTACGACGACGCGAAAGTAAGCGACAAGCCGACCGTTAAAACCACGCACTTTGCACTGCCGGAACTCATGCACAACCTTGCGCTGATGGTGCAGCACTGTGAGCAGGACATAATAACGATCGATAAGCAAAAGTGTGAAACGAAGGACCGCGAGGAGCAGCTGGCGCAGGAGAAAGAAAATCTCATCCGAATCAGCGACCTTGAAAAAGATTACCTGCAAACCCTCGAGGAGGCACTCGAACTGGTCCGTTCCCTTGTCGAGCCGGCGGAAGGCGCAAATCTCGAACTGGAAGAATGCGAGAAGCGTTTCGTCCGGCTCTGCGCCAATTATCCGGCCGAGTGCGCTGAGTTTGGGTTGTCCGATTTGGCGGCGGGAGTCGTAGCGCCTCTCATTGCCGCTCGTCTAAAAGACTGGGCTCCGTTTAGCGATCCGACGCGTCACGTAGAACTGTTCAAACGCTGGCGTTCGATTCTGGGCGCTACCAGTGCGGACGTATCATGTAGTTTGCTCGATCCTTATTCGGCCGTCGTTTGGACCGGTGTCATTCCCAGCATACGGACGGCGGCAAACGAGTGGGATCCCCGTCGTCCAACGCCCATGATCGCACTGTTGGATGCCTGGGCCCCAGTTCTGCCCGCGTGGATTCTCGATAACGTGCTGGAGCAGATCGTACTGACCAAACTGTCGGCGGCCGTCGTCGAGTGGGATCCCCTCACCGACACGGTGCCCATTCACAGCTGGATTCATCCATGGGTCGATCTGCTAGGGACAAAACTGGAGGGTGCGGTGTACACTATGATACGGGAAAAGTTATCGCGCGCCCTGAAAGCCTGGCATCCAGAAGATCGTTCTGCTCGCGCCATGATAACGCCCTGGAAAGGTGTGTTCTCCGAGGAAGACTTGCAGGTGTTCCTGACGAAAAATATAATCCCAAAGCTGGAGCTGCGTTTGACAGAGGTCATCGTAAATCCACTCCAACAGGATTTGGAGATGTTCAACCAGGTGTGGGAATGGCACGAACTCATTTCACCGCTTCAGATGGCCAACATGCTCGACAAATACTTCTTTCCAAAGTGGTTGCAGACGCTTGTAATCTGGTTGAATCAGGCCCCCAACTTTGACCACGTGTCCCGGTGGTATCAGGGCTGGAAATCGCAGTTCACCGATGATGTCGTTAGGCAAACGAACGTCAAAGAGAGCTTCCGCAAAGCACTGGAACTCATGCAACGTTCTATCGGTGCGGCCAGTGGTGGAATTGCCGATGGTCAAGAGCTACCACCCGCAGCTTCGATGGCGCCAATACCACCTCCACCCAAACCTCCAACCCTACTAGACGTGGATGCTACTCCAGCGCTGGAATTCAAAGAACTCGTCTCGCAGAAATGCGCAGAACGGGGCATTATCTTTGCACCGATGCCGGGACGGCGCGAGCTGGGAAAGCAAGTGTATCGCGTTGGGAAGCTGTTTTGCTACATCGACCGCTCCGTGTGCATCGTAAGTTTGGACGGTGGCGTCAACTGGACCCCAATATCTCTGACGACGTTACTGGAACGGGCCGTTACTGGTTGA
Protein Sequence
MENDEYERFEITDYDLANEFNPNRGRRRPTKNQQIYGIWADDSENEYGDDDTSAGVGRKRTSKKPKDYTAPIGFIAGGIQQSGKKPEAKKQQHTGEDEDGEEESDDEEGTARPQFDRKASSSTSESESDSAEKPSHNDLRSMAGFRSFSKPGPTTGKGVGNWEQHTRGIGAKLLLQMGYQPGRGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKKTTVADAKQQKAPKHDEQKGAEKADEGQQWRKAKEGKLGKNRYFYKTVEDVIEKGKKTTTATYAPFEKSSKLSQVTVIDMTGPEKRVLSGYHALGQARVADEELYDDAKVSDKPTVKTTHFALPELMHNLALMVQHCEQDIITIDKQKCETKDREEQLAQEKENLIRISDLEKDYLQTLEEALELVRSLVEPAEGANLELEECEKRFVRLCANYPAECAEFGLSDLAAGVVAPLIAARLKDWAPFSDPTRHVELFKRWRSILGATSADVSCSLLDPYSAVVWTGVIPSIRTAANEWDPRRPTPMIALLDAWAPVLPAWILDNVLEQIVLTKLSAAVVEWDPLTDTVPIHSWIHPWVDLLGTKLEGAVYTMIREKLSRALKAWHPEDRSARAMITPWKGVFSEEDLQVFLTKNIIPKLELRLTEVIVNPLQQDLEMFNQVWEWHELISPLQMANMLDKYFFPKWLQTLVIWLNQAPNFDHVSRWYQGWKSQFTDDVVRQTNVKESFRKALELMQRSIGAASGGIADGQELPPAASMAPIPPPPKPPTLLDVDATPALEFKELVSQKCAERGIIFAPMPGRRELGKQVYRVGKLFCYIDRSVCIVSLDGGVNWTPISLTTLLERAVTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00094470;
90% Identity
iTF_00094470;
80% Identity
-