Acru006362.1
Basic Information
- Insect
- Anopheles cruzii
- Gene Symbol
- -
- Assembly
- GCA_943734635.1
- Location
- OX030879.1:58833108-58834466[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.9e-13 1.5e-09 37.2 0.0 3 39 250 287 249 292 0.89 2 3 0.014 27 4.4 0.0 24 35 318 329 302 337 0.79 3 3 3.6e-10 7e-07 28.7 0.1 6 39 358 391 356 394 0.94
Sequence Information
- Coding Sequence
- ATGGAATCATTGATAGCATCAAATCTGCTGTGGATCGACTACGCCGAGCATATGTTACGCACGTACAGAACCATCTATGAAAACGAACAATACGCGGACTGTACTTTAGTTTTAGCCGATGGGCAGCAGAACGCCAGCAGCACCGTGCTTGGGCTGGCCTCGGGCTTTTTTGAAAGAATTTTCGCCATCACCGGAAACGAGGCTGCCCCGCGCGAACGGTTCGTAGTGATGATCCCCGATATAACGCTGCAGATTATGCAGCACGTGTTGCTATTTATCCACACCGGCGAGATTATTCTGCAGTACAATCAAATGTCTTGTTTCGTGGACGCTTGCTCCTTGCTAGAGCTGCGCGGGATGAAAACTGTGGACAGCGTCATCGAGGGAATGAAAATAAGTGTACTCGCATCACCCGAAACAGCCGTTTTGGGCGCAGAAAGCGGAAGTGCCATGCACACACAATGCCTGGACGAAGATTGGTTTCCTGCGGTCAGTGCCGAAGACGTGGAAGGAAGGCAAACCGATGGTACGGTGGACGAATCTCCTGCCGATGGACTCGAAGCAAATCGAGAGTACTACAGCTATGACGCTGTGGCCATAATGGACGAAGATACAACAGAGCACTCAGATCCCGCAGAAAACAACGACGAGCAACTGGACCCGTCCACCGCGTTGGCCAACCTTTCCGGCAACAAAGCGATGCCAGATGCGGAGACTACCGTAGCGGGACAGTCGTCAAATTACTCGGATCGCCTCGAGGAAGCAGTTGATGCGATCGTAACAGGCAAAATGAGCTTCCGGGGGGCAGCCCGTACGTTCCGCGTGTCCAAAAGTGTGCTCTGGCGACGGACCGTCAACGAAACACGAACTGAAAAGGCTCCCGAACTTCCACCGTCTCGGCTGGACGCCATAGAAGCGATCAAGGCCGGAGAAAAGCTGATAACCGTTAACCGACGGTTCGGGATTCCGCTCGGGACGCTGCACCGTGATAAGATTCGGCTCTACAATAAGGGTGATCTTCCGGAAACGGTGAAATTGAAGCACAAGGACATCAACTACAAGCAGCGTGTCAGTGAGGCGGCCCAACAGTGCGTAACCGGTATGATGTCGCTAACGGAAGCGACACGGAGCTACTCGATACCCTCCACAACGATCTGGCGAAGGATCAAGACGATACGGGCGGGCGATGCTGACGGGGCCACAAGCAAACGCAGCCACAGACCGGTGGTTAGTCGCAGGAAAGGAACGCAAAAGAACCGAGAACCGCCTGCCCTGGAACGAACAGAGGACAGCTTTGTGGCCACCGAAGACGATCCGCTGGCTGGGGTCGCCTGGGCAGAAGAACCTGAGCTGTTGTGA
- Protein Sequence
- MESLIASNLLWIDYAEHMLRTYRTIYENEQYADCTLVLADGQQNASSTVLGLASGFFERIFAITGNEAAPRERFVVMIPDITLQIMQHVLLFIHTGEIILQYNQMSCFVDACSLLELRGMKTVDSVIEGMKISVLASPETAVLGAESGSAMHTQCLDEDWFPAVSAEDVEGRQTDGTVDESPADGLEANREYYSYDAVAIMDEDTTEHSDPAENNDEQLDPSTALANLSGNKAMPDAETTVAGQSSNYSDRLEEAVDAIVTGKMSFRGAARTFRVSKSVLWRRTVNETRTEKAPELPPSRLDAIEAIKAGEKLITVNRRFGIPLGTLHRDKIRLYNKGDLPETVKLKHKDINYKQRVSEAAQQCVTGMMSLTEATRSYSIPSTTIWRRIKTIRAGDADGATSKRSHRPVVSRRKGTQKNREPPALERTEDSFVATEDDPLAGVAWAEEPELL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00097203; iTF_00094606; iTF_00094405;
- 90% Identity
- iTF_00097203;
- 80% Identity
- iTF_00097203;