Abel005378.1
Basic Information
- Insect
- Anopheles bellator
- Gene Symbol
- -
- Assembly
- GCA_943735745.2
- Location
- OX030927.2:57251271-57252689[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-13 3.1e-10 39.3 0.0 3 36 259 292 258 299 0.90 2 3 0.028 41 3.7 0.0 24 35 329 340 328 348 0.85 3 3 2.4e-10 3.4e-07 29.6 0.1 6 39 369 402 367 405 0.94
Sequence Information
- Coding Sequence
- ATGGAACCATTGGCCAGCGAACTCATCGCATCCAATCTGCTGTGGATTGACTACCAGGAACACTTGTTGCGCACGTACAGAACGATCTACGAAAACGAACAGTACGCGGACTGTACGTTGGTTTTAGCCGATGGGCAACAGAAGGCCAACAGCGCGGTGCTTGGACTGGCCTCGGGCTTTTTTGAGAGAATTTTCGCCGTCTCCGGAAATGTGGCTGCCCCGCGCGAACGGTTCGTGGTGATGATACCGGACATGAGTCTGCAGATTATGCAGCACGTGCTGCTCTTCATCCACACCGGCGAGATTATTCTGCGGTCCAATCAGATGTCTTGTTTCGTGGACGCTTGCTCCTTGCTTGAGCTGCGGGGAATGAAAACTGTGGGCAGCGTCATCGTGGGGATGAAAGTAAGTGCACTAACGATGGCTTCACACGAAACGGCCGTTTTGGGCGCAGAAAGCGGAAGTGCCATGCATACGCAATGCCTGGGCGAAGATTGGTTTCCCGCGGTCAGTGCCGCAGACGTGGAAGGAAGGCAATCCGATGGTACGGTAGAGCAATCGCTCGATGGACTCGAAGCGAATCGAGATAGTCAGTACTTCAGCCTCGACGCGGTGGCTATTATGGACGAGGACACAACAGAGCTCTCAGATTCCGAAGGAAACAACGAGCAACTGGACATGTCCACCGCGTTAGCCAACAATTCTGGCTGCAAAGCGACGACAAAGGAAGGGGACGGACGCGATGCCGAATCTTCCGCGTCGTCAAACTACTCCGATCGCCTCGAGAAAGCAGTTTTTGCGATCGTTACCGGCAAAATGAGCTTCCGGGTGGCAGCCCGTACGTTCAGCGTGTCCAAAAGTGTGCTCTGGCGACGGACAGTTAACGAACCAGGTACACGGATTGAAAAGTGTCCCGAACTGCCGCCGTCTCGATTGGACGCCATAGAAGCGATCAAGGCCGGAGAAAAGCTGCTAAACGTTAACCGACGGTTCGGGATTCCGCTGGGGACGTTGCATCGTGATAAGATTCGGCTGTACAATAAGGGCCACCTTCCGGAAacggtgaaattgaagcacAAGGACATCAACTATAAGCAGCGCGTGAGTGAGGCTGCCCAACAGTGCATAACTGGTATGATGTCGCTAACGGAAGCGACACGCAGCTACTCGATACCCACCACAACGATCTGGCGAAGGATCCAGACGATACGGGCGGATGCTGACGGGGCTACAAAGAAACGCAGCAGATCGGTGGTTAGTCGCAGGAAAGGAACGCAAAAGAGCCGGGAACCTCCGGCCTTGGAACGGACTGAGGACAGCTTGCTGGCAACCGAAGACGATCCGCTAAGAATGGCGGGGGTCGCATGGGCAGAAGAACCGAAGGAAGGATCCATGTCTGCTAGTTTGGCATTGTTGTGA
- Protein Sequence
- MEPLASELIASNLLWIDYQEHLLRTYRTIYENEQYADCTLVLADGQQKANSAVLGLASGFFERIFAVSGNVAAPRERFVVMIPDMSLQIMQHVLLFIHTGEIILRSNQMSCFVDACSLLELRGMKTVGSVIVGMKVSALTMASHETAVLGAESGSAMHTQCLGEDWFPAVSAADVEGRQSDGTVEQSLDGLEANRDSQYFSLDAVAIMDEDTTELSDSEGNNEQLDMSTALANNSGCKATTKEGDGRDAESSASSNYSDRLEKAVFAIVTGKMSFRVAARTFSVSKSVLWRRTVNEPGTRIEKCPELPPSRLDAIEAIKAGEKLLNVNRRFGIPLGTLHRDKIRLYNKGHLPETVKLKHKDINYKQRVSEAAQQCITGMMSLTEATRSYSIPTTTIWRRIQTIRADADGATKKRSRSVVSRRKGTQKSREPPALERTEDSLLATEDDPLRMAGVAWAEEPKEGSMSASLALL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00096988;
- 90% Identity
- iTF_00094606;
- 80% Identity
- iTF_00094606;