Acru005490.1
Basic Information
- Insect
- Anopheles cruzii
- Gene Symbol
- -
- Assembly
- GCA_943734635.1
- Location
- OX030879.1:49154947-49162048[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.95 1.8e+03 -1.5 0.8 14 26 109 121 108 122 0.90 2 5 1.7e-11 3.3e-08 32.9 0.0 2 39 575 613 574 617 0.90 3 5 2e-12 3.9e-09 35.9 0.0 2 39 629 666 628 669 0.94 4 5 4e-18 7.7e-15 54.1 0.0 3 45 685 728 683 728 0.97 5 5 2.7e-17 5.3e-14 51.5 0.0 1 43 735 778 735 779 0.96
Sequence Information
- Coding Sequence
- ATGTCGAATGGTCGCAAATCTTGTTTAAATGCAGTTTCCAGAAGCCTACTACGGACTGCAGAACAGTTGAAAATCAAGGGCCTATGTGAGGTAGGCGAACCACAGTACGAGCAGGACTACTCGCCCGCGCTCAAGCGCTACAAACCGTATCGATCGCGTTCGCCCCCGGATAACCGGAACCATCACCACCAGCAACCTCCTCCCCCACCTCCACCGCCCGGATCGGGATCGTACGGTGGGCTCGGCGGTGGTGGCGGCGGCAGCAACAACAGCGGTGCTGGAGCATCTGCCGCTGGTGGTCGATCCGGCGGAGGATCGCACGGTAACGGTTCCACGTCGTCTTCGCAGGCGTCCTCCGGGTATAGTGAAAACGGCAAAAGTTGTGGTGGCAGCAAAGGGCGAAGCTATCACCACCACCATCTCCACCCGCCCCATCTTCATTCGCACCTGCTGCAGCAGCACGGTGGTGAAGCGGGTGGATCTACGCCTTCCCCGTCCGCGGCCGGAGCATCGAGCACGACCAGCAGTAGCCGCCTAAGGGGGGAGGACGATGGATCGCCGTCCGCTGTAGTAGTGGTAGAATCACACGACCTCACTACCACCAGCAGCCAGACGCGGAGTTCTgcggccaagaataaacactaccttcctcacctgcatcatcatcatcatcatcacctgccgcagcatcatcattcgcagcaccagcaCTCGATTGCCAGCAAAATGGCCAGTCTAGGCATGGGCGTTGGAATAAATGGTTCCGTTATGGGCGTACCGATGGGTTACTTGGATTTTGCACCGGAACCACCAGCACCCACGGCGACACCGGTGACAGAACATGTGGACATTAATTGTGCGCCTAGCCACGATACCCGTGATCTGTCCAATTCTGTGCCAAACGATGGTGATTTACGAGTGAAATTCGAAACGTTACGTTCACTAgatcatcccccgaacgcagttcaactggacaatcaggtcatcagccatcagcagctgcaccaccagcagcagcaggcgcaacaacaggcgcaacagcaattgttgcatcaacagcatttactgcaacagcagcagcagcaacaacaagcggcggcagcggcagcggcggcagcagcggcggcggcgcatcggcaaacaccgcagcctccggcgcagcagccacaaaatgaccaccgacattcgccaccacacatgcagcaacagcagcaacagcagcagcacgtaatgttgatggatccccagcagcaacagcaccatccgaccactcacagccccgcctcgagtgtatcgtcctcatcttccagtcAACATCCGGAGAACTTGGTAACTGGTGGTGGCGCTGGTGGTGGCGGAGGGGCAGCTGGAGGGGCGACGGGCATCCCACCGAGCGCCGCCACCAGTAGCAATGGTAGCAATGGAGGCGAGGAGCTGCTGAAACCGAGACTGAACTTAAAACAGGAAATCATTAACGATGCCGAGCAGCAGCAACAGACGATGGAGGTCGAGCAAGATCAGTCATCGATGCACGGCAGCAGTGGCATGGTGGTGACACCGGAAATCTCCGGCATTATGAACCAAAGCCAGATGAGCGATATGTATCAATCGGACGCAAGCGAGGATTCCAAGGCGGGCATTTTGGACGGGTCTTCGATCCAGTACACCAATCTCACCAGCCCGAACGAGGCGAAAACGCCAACCGGACCCAAGACGTGGACCGCCGAGGATATGGAGTCGGCGTTGGAAGCGTTGCGCACTCACAACATGAGCTTGACCAAGGCTTCCGCAACGTACGGCATTCCGTCGACCACACTCTGGCAGCGTGCCCATCGACTCGGTATCGATACGCCCAAGAAGGAGGGTCCGTCGAAGACGTGGAACGAAGATTCTCTTAACAACGCCCTGGAAGCACTGCGCACGGGGACGATCTCGGCCAACAAGGCCTCGAAAGCGTTCGGCATTCCGTCGTCCACACTCTACAAGATTGCGCGCCGCGAAGGCATACGGCTGGCGGCACCGTTCAACGCGGCGCCCACCACCTGGTCCGCGGAGGATCTAGACCGTGCCTTGGAAGCGATTCGCGCCGGACAGACGTCGGTGCAGAAGGCGAGCACCGAGTTTGGCATTCCGACCGGCACACTGTACGGGCGGTGCAAGCGCGAAGGGATCGAGCTTTCGCGTTCCAACCCCACGCCCTGGTCGGAGGACGCGATGATGGAAGCCTTAGAATCAGTCAAACAGGGACACATGTCGATCAATCAAGCCGCCATCCACTACAACCTGCCGTACAGCTCGCTGTACGGTCGGTTCAAGCGTGGCAAGTACGATACGCCGAGCTCGGGtggtggtggcagtggcggtggcggcggtggtggcagttcgtcaaacgctgctgctgctgctgctgctaccggtggcggtgccggtgccggaggaggaaACAGCAACGTCGGTGGTAGTCCCCAGATGGAGTTTAAAATAGAACCACAGCATAATGATCATAGTCCAGAGAATACGcaacattacaatcctgcactgtcggcatcatcgacgccaacgagcaatgctccaacgcaacagcagcagcagcagcagcagcagcaacagcagcagcagcaacaacagcagcagcagcaacagcagcaacagcagcagcagcaacaacaacagcagcaacaacagcagcagcagcaactctcccaccatttagtccaatcggcgccaacacctatccaccaacagcagcaacagcagcagcaggtggtcgctcagcatcagcagcagcaccaccacttgcaccatcagccgcagctgattcagcatcacatcattccgcagcagcaccacataatctaccaacagccgctgcaaccgattcaacagcagccccagtaccacccgatgtaccacatcatcaagcaggagaacgacagaagttga
- Protein Sequence
- MSNGRKSCLNAVSRSLLRTAEQLKIKGLCEVGEPQYEQDYSPALKRYKPYRSRSPPDNRNHHHQQPPPPPPPPGSGSYGGLGGGGGGSNNSGAGASAAGGRSGGGSHGNGSTSSSQASSGYSENGKSCGGSKGRSYHHHHLHPPHLHSHLLQQHGGEAGGSTPSPSAAGASSTTSSSRLRGEDDGSPSAVVVVESHDLTTTSSQTRSSAAKNKHYLPHLHHHHHHHLPQHHHSQHQHSIASKMASLGMGVGINGSVMGVPMGYLDFAPEPPAPTATPVTEHVDINCAPSHDTRDLSNSVPNDGDLRVKFETLRSLDHPPNAVQLDNQVISHQQLHHQQQQAQQQAQQQLLHQQHLLQQQQQQQQAAAAAAAAAAAAAHRQTPQPPAQQPQNDHRHSPPHMQQQQQQQQHVMLMDPQQQQHHPTTHSPASSVSSSSSSQHPENLVTGGGAGGGGGAAGGATGIPPSAATSSNGSNGGEELLKPRLNLKQEIINDAEQQQQTMEVEQDQSSMHGSSGMVVTPEISGIMNQSQMSDMYQSDASEDSKAGILDGSSIQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRTHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGSGGGGGGGSSSNAAAAAAATGGGAGAGGGNSNVGGSPQMEFKIEPQHNDHSPENTQHYNPALSASSTPTSNAPTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLSHHLVQSAPTPIHQQQQQQQQVVAQHQQQHHHLHHQPQLIQHHIIPQQHHIIYQQPLQPIQQQPQYHPMYHIIKQENDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00094403;
- 90% Identity
- iTF_00094403;
- 80% Identity
- -