Abel003601.1
Basic Information
- Insect
- Anopheles bellator
- Gene Symbol
- -
- Assembly
- GCA_943735745.2
- Location
- OX030927.2:36430568-36436950[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.1e-11 3e-08 32.9 0.0 2 39 568 606 567 610 0.90 2 4 2.5e-12 3.6e-09 35.9 0.0 2 39 622 659 621 662 0.94 3 4 5e-18 7.2e-15 54.1 0.0 3 45 678 721 676 721 0.97 4 4 3.4e-17 4.9e-14 51.5 0.0 1 43 728 771 728 772 0.96
Sequence Information
- Coding Sequence
- ATGATCGAGCATCCTCAGAAGCTCTTGACTTTTGACGCACAATCTTGGAGCCTACTACGGACTGCAGAACAATTAAAAATCAAGGGCCTATGTGAGGTAGGCGAACCACAGTACGAGCAGGACTACTCGCCCGCGGTCAAGCGCTACAAACCGTATCGATCGCGTTCGCCCCCGGATAACCggaaccatcaccaccagcaacctcctcctccacctccaccgcccGGATCGGGATcgtacggtggcggcggcagcagcaacagcggtgGTGGAGCATCTGCCGCTGGTGGTCGATCGGGCGGAGGATCGCACGGTAACGGTAGCCACAGTTCCACGTCGTCTTCGCAGGCGTCCTCCGGGTACAGTGAAAACGGCAAAAGTTGTGGCAGCAAGGGACGAAGCTATCTCCACCATCACCTCCACCCGCCCCATCTGCATTCACacctgctgcagcagcacggtggTGAAGCGGGTGGATCAACGCCTTCCCCGTCCGCGGCCGGAGCATCGAGTACTACCAGCAGTAGCCGCCTAAGGGAGGACGATGGATCGCCGTCCGCTGTAGTAGTGGTAGAATCGCACgacctcaccaccaccagcagcaacacgcgGAGTTCTGCTGCCAAGAATAAACACTACCTTCCTCacctgcatcatcatcatcatcacctgccgcagcatcatcatcattcacagcaccagcactcGATTGCCAGCAAAATGGCCAGTCTAGGCATGGGCGTTGGAATAAATGGTTCCGTTATGGGCGTACCGATGGGTTACTTGGATTTtgcaccggaaccaccagcACCCACGGCGACACCGGTGACAGAACATGTGGACATTAATTGTGCGCCTAGCCACGATACCCGTGATCTGTCCAGTAAGTATTCTGTGCCAAACGATGGTGATTTACGAGTGAAATTCGAAACGTTACGTTCACTAGATCATCCCCCGAACGCAGTTCAACTGGACAATCAGGTCGTCAGCCATCAGcagctgcaccaccagcagcagcaggtgcaacagcaacagcaattgTTGCACCAACAGCATttactgcagcagcagcagcaacaacaacaagcggcggcagtggcagcggcggccgcagcagcggcgcaTCGGCAAACGCCGCAGCCTCCGGCGCAGCAGCCACAGAATGACCACCGGCATTCGCCACCACAcatgcagcaacaacaacagcagcagcacgtaaTGTTGATGGAtccccagcaacagcagcaccatccgACCACTCACAGCCCTGCATCGAGTGTATCGTCCTCATCTTCCAGTCAGCATCCTGAGAACTTGGTAacaggcggtggtggcggaggggCAGCTGTAGGGGCGACGAGCGTCGCACAGAGCGCCGCCGCCAGTAGCAATGGTAGCAATGGAGGCGAGGAGCTGCTGAAACCGAGACTGAACTTAAAACAGGAAATCATAAACGatgccgagcagcagcaacagacgATGGAGGTCGAGCAGGATCAGTCATCGATGCACGGCAGCAGTGGCATGGTGGTGACACCGGAAATCTCCGGCATTATGAACCAAAGCCAGATGAGCGATATGTATCAATCGGATGCCAGCGAGGATTCCAAGGCGGGCATTTTGGACGGGTCCTCGATCCAGTACACCAATCTCACCAGTCCGAACGAGGCGAAAACTCCTACCGGACCCAAGACGTGGACCGCCGAGGATATGGAGTCGGCGCTGGAAGCGTTGCGCACTCACAACATGAGCTTGACCAAGGCTTCCGCAACGTACGGCATTCCATCGACTACACTCTGGCAGCGTGCCCATCGACTCGGTATCGATACGCCCAAGAAGGAGGGTCCGTCGAAGACGTGGAACGAAGATTCTCTTAACAATGCCCTGGAAGCACTGCGCACGGGGACGATCTCGGCCAACAAGGCCTCGAAAGCGTTCGGCATTCCGTCGTCCACACTCTACAAGATTGCGCGCCGCGAAGGCATACGGCTGGCGGCACCGTTCAACGCGGCGCCCACCACCTGGTCCGCGGAGGATCTAGACCGTGCCTTGGAAGCGATTCGCGCCGGACAGACGTCGGTGCAGAAGGCGAGTACCGAGTTTGGCATTCCGACCGGCACACTGTACGGGCGGTGCAAGCGCGAAGGGATCGAGCTTTCGCGCTCCAACCCCACGCCCTGGTCGGAGGACGCGATGATGGAAGCCTTAGAATCAGTCAAACAGGGACACATGTCGATCAATCAAGCCGCCATCCACTATAACCTGCCGTACAGCTCGCTGTACGGTCGATTCAAGCGTGGCAAGTACGATACGCCGAgctcgggtggtggtggcagtggcggtggcggcggtggtggcagttcgtcaaacgctgctgctgctgctgctgctaccggtgccggtgccggtgccggaggaaACAGCAACGTCGGTGGTAGTCCCCAGATGGAGTTTAAAATAGAACCACAGCATAATGATCATAGTCCAGAGAATACGCAACATTACAATCCTGCACTGTCGGCATCATCGACGCCAACGAGCAATGCTCcaacgcaacagcagcagcagcagcagcagcagcagcagcaacaacaacaacagcagcagcagcaacagcagcaacagcaacagcagcaacagcagcagcaacaacagcagcaactctCCCACCATTTAGTCCAATCGGCGCCAACACCTGTCCCGATCATTATCGATCCCGCACATCACCATATTCCGCATCCACATCAGCAGatccaccaacagcagcagcagcaggtggtcgctcagcatcagcagcagcaccaccacttGCATCATCAGCCACAGCTGATTCAGCATCACATCattccgcagcagcatcacatAATCTACCAACAACCGCTGCAACCGATTCAACAGCAGCCCCAGTACCACCCGATGTACCACATAATCAAGCAGGAGAACGACAGAAGTTGA
- Protein Sequence
- MIEHPQKLLTFDAQSWSLLRTAEQLKIKGLCEVGEPQYEQDYSPAVKRYKPYRSRSPPDNRNHHHQQPPPPPPPPGSGSYGGGGSSNSGGGASAAGGRSGGGSHGNGSHSSTSSSQASSGYSENGKSCGSKGRSYLHHHLHPPHLHSHLLQQHGGEAGGSTPSPSAAGASSTTSSSRLREDDGSPSAVVVVESHDLTTTSSNTRSSAAKNKHYLPHLHHHHHHLPQHHHHSQHQHSIASKMASLGMGVGINGSVMGVPMGYLDFAPEPPAPTATPVTEHVDINCAPSHDTRDLSSKYSVPNDGDLRVKFETLRSLDHPPNAVQLDNQVVSHQQLHHQQQQVQQQQQLLHQQHLLQQQQQQQQAAAVAAAAAAAAHRQTPQPPAQQPQNDHRHSPPHMQQQQQQQHVMLMDPQQQQHHPTTHSPASSVSSSSSSQHPENLVTGGGGGGAAVGATSVAQSAAASSNGSNGGEELLKPRLNLKQEIINDAEQQQQTMEVEQDQSSMHGSSGMVVTPEISGIMNQSQMSDMYQSDASEDSKAGILDGSSIQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRTHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGSGGGGGGGSSSNAAAAAAATGAGAGAGGNSNVGGSPQMEFKIEPQHNDHSPENTQHYNPALSASSTPTSNAPTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLSHHLVQSAPTPVPIIIDPAHHHIPHPHQQIHQQQQQQVVAQHQQQHHHLHHQPQLIQHHIIPQQHHIIYQQPLQPIQQQPQYHPMYHIIKQENDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00096987;
- 90% Identity
- iTF_00096987;
- 80% Identity
- -