Basic Information

Gene Symbol
Bgb
Assembly
GCA_943734635.1
Location
OX030881.1:9544929-9549559[-]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-82 5.6e-78 260.1 0.6 1 165 30 204 30 206 0.93

Sequence Information

Coding Sequence
ATGATGAACGATCCGGCCGCGCTCGGGATGATCCCGTTCGACACGATCGGGCTGTACGAGCAGCCGAAGCCGCGCTTCATTTTCAAGATGCCCCGCGTAGTGCCGGACCAGAAGTCCAAGTTCGAGAGCGACGACCTCTTCAAGAAGCTCAGCCGCGACAGTGAGGTTCGATACACCGGATTCCGGGACCGCCCGATCGAGGAGCGGCGCGGCCGGTTCCGGGCCGGGTGCTGCGAGGGCCACACGGAGGTGTCGTTCGCCGCGACCGGCATCAACCTGCAGCTCGTCTTCAACCCGAACCACGGCCTCTACCACCACCCGCACCACCACCACCACCTCCATCCGGCGCACCTGGGCCTGGAGAAGGAGTGTGACTTCGACAAGGAGCACGGCAAGGTTCACATCAAGTCGCACTTCATCATGAACGGGGTGTGCGTGCGTTTCCGCGGCTGGGTCGACATGGAGCGGCTGGACGGGATCGGGTGCCTGGAGCTAGACGAGAAGCGGGCCGCCCAGGAGGACGCGATCCTGCGCGAGCAGCTCGAGCGGTACAACCAGCGGCTGCGCGACTTCGAGGACAAGCAGCGCACCTACCAGCGCACCACGCAGGACGAGTTCGACCAGATCCGCCGGAACGGGTCCGGCATCGGCGTGGGGGTGACGGCCGGTGCGTCCGGCATGTGGCGGCGATAA
Protein Sequence
MMNDPAALGMIPFDTIGLYEQPKPRFIFKMPRVVPDQKSKFESDDLFKKLSRDSEVRYTGFRDRPIEERRGRFRAGCCEGHTEVSFAATGINLQLVFNPNHGLYHHPHHHHHLHPAHLGLEKECDFDKEHGKVHIKSHFIMNGVCVRFRGWVDMERLDGIGCLELDEKRAAQEDAILREQLERYNQRLRDFEDKQRTYQRTTQDEFDQIRRNGSGIGVGVTAGASGMWRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00400307;
90% Identity
iTF_01471121;
80% Identity
iTF_00094254;