Acou004966.2
Basic Information
- Insect
- Anopheles coustani
- Gene Symbol
- FTZ-F1
- Assembly
- GCA_943734705.2
- Location
- OX030900.2:56065491-56082341[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-15 8.5e-12 45.3 5.8 2 31 18 45 17 61 0.83 2 3 0.19 9.2e+02 -0.9 0.2 125 156 81 111 65 133 0.56 3 3 2.6e-77 1.2e-73 249.0 0.1 135 408 187 457 169 458 0.86
Sequence Information
- Coding Sequence
- ATGAACACTAACCCACCGTCCGGTAGGCTCGCAGCGGGCGTACAAGATCCCGTGCGAGCCGATCGGATGCGCGGCGGAAGGAACAAGTTCGGTCCCATGTACAAGCGGGACCGGGCGCGAAAGCTGCAGATCATGCGCCAGCGTCAGCTCGCCCTACAGGCCCTGCGCGGCTCGATAGGAGGAGGTGTCGGCATCGGAACGCTAGGCTCGGACGGAACCTCGCCACAGCTGCAGGGCCTGGACTACCACCAGCCGTACTCGAGCATGCACATTAAACAGGAAATTCAGATTCCACAGGTATCTTCGTTGACATCATCGCCAGACAGCTCGCCGAGCCCGATCGCGATCGCACTCGGTCAGGTCAATCCGCAGACGACGATATCGCTCAGCAGCAGTGGAGTGGGCggcaacggtggtggtggcggcggtggcggtggtggtgggggcggtggcggcggcggtggtggtagcAATGGGTCCGGTGCCGGCACCGGCAGCTCCAACTCCAGCTCCACCGGTCTCCCGAACCCGCTGTCCGACTCGAAGCTCTGGATGAGCGCCAACTCGACGACCGCCTCGCCACACTCTCTCAGCCCGAAGGCCTTCAGCTTCGACTCCAATCCCACCAGCACGGCCGACTCCGGCAACCCGGCCGACACCCTAAGGCTAGTGGTATCGCCGATGATCCGCGAGTTCGTCCAGTCGATCGACGACCGCGAATGGCAGACGTCGCTGTTCTCGCTGCTCCAGAGCCAGTCCTACAATCAGTGCGAGGTCGACCTGTTCGAGCTGATGTGCAAAGTATTAGACCAAAATCTTTTCTCGCAGGTCGACTGGGCGCGGAATACGATATTCTTCAAAGATTTAAAGGTGGACGATCAGATGAAGCTGCTGCAAAACAGCTGGTCGGACATGCTAGTGCTGGACCACATACACCAGCGGTTGCATAACGGGCTGCCGGACGAAACCACCCTGCACAACGGGCAGAAGTTTGATCTCTTAGGTTTAGGGCTGCTGGGCGTACCGAGCCTGGCGGAACACTTCAACGAGCTGCAAAACAAGCTGCAGGAGCTTAAGTTTGACGTCGGGGACTACATCTGCATGAAgttcctgctgctgcttaaTCCCGaCGTCCGGGGGATCACCAACCGCAAGACAGTCGTCGAGGGGTACGAAAACGTGCAAGCTGCCCTGCTGGACTATACCCTTACCTGCTACCCGTCAGTGCCTGACAAGTTCAGCAAGCTGCTAAGTATTATTCCGGAAATTCACGGAATGGCTGCCAGAGGCGAGGAACATCTGTACATCAAACACTGCGCCGGAAGTGCCCCGTCGCAGACGCTGCTAATGGAGATGCTCCATGCGAAGCGGAAATGA
- Protein Sequence
- MNTNPPSGRLAAGVQDPVRADRMRGGRNKFGPMYKRDRARKLQIMRQRQLALQALRGSIGGGVGIGTLGSDGTSPQLQGLDYHQPYSSMHIKQEIQIPQVSSLTSSPDSSPSPIAIALGQVNPQTTISLSSSGVGGNGGGGGGGGGGGGGGGGGGGSNGSGAGTGSSNSSSTGLPNPLSDSKLWMSANSTTASPHSLSPKAFSFDSNPTSTADSGNPADTLRLVVSPMIREFVQSIDDREWQTSLFSLLQSQSYNQCEVDLFELMCKVLDQNLFSQVDWARNTIFFKDLKVDDQMKLLQNSWSDMLVLDHIHQRLHNGLPDETTLHNGQKFDLLGLGLLGVPSLAEHFNELQNKLQELKFDVGDYICMKFLLLLNPDVRGITNRKTVVEGYENVQAALLDYTLTCYPSVPDKFSKLLSIIPEIHGMAARGEEHLYIKHCAGSAPSQTLLMEMLHAKRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00098452;
- 90% Identity
- iTF_00099692;
- 80% Identity
- iTF_00096446;