Basic Information

Insect: Anopheles coluzzii
Gene Symbol: bab1
Assembly: GCA_016097175.1
Location: CM027929.1:35336215-35377823[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.5 4.5e+03 -2.9 0.0 29 36 240 247 240 254 0.80

2 3 5e-13 8.9e-10 37.8 0.0 1 45 495 539 495 539 0.95

3 3 0.02 36 3.8 0.8 4 20 675 690 674 690 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.5	4.5e+03	-2.9	0.0	29	36	240	247	240	254	0.80
2	3	5e-13	8.9e-10	37.8	0.0	1	45	495	539	495	539	0.95
3	3	0.02	36	3.8	0.8	4	20	675	690	674	690	0.93

Sequence Information

Coding Sequence: ATGGGTAGCAGCGAAGGGCAAACGTACTGTCTGCGATGGAACAACCACAAATCGAACCTGGTCGAGATACTCGACGCGCTGATCAAGATGGAGTGCTACGTCGACTGCACGATCTACGTCGACGACCAGGTCCAGTTCAAGGCGCACCGGGTCGTGCTGGCCGCCAACTCGCCCTACTTCCAGTCGATCCTGCAGGACGTGCCGATGGATCACTGCAGCATCCTGTTCCCGGGCGTGCAGGAGTTCGAGATGCGCGCACTGCTCGAGTACATGTACACCGGCGAGGTGAACGTCACCCAAGCACAGATCCCGCGCATCATGAAGATCGCGGAACAGCTCGAGGTGAAGGGCCTGTACGATATGGCGGACCTGAAGGGGCGCTTCAGCAAAATGGTCGATGTGGATCAGCTGATGCGCGACCGTGACCCGGCCACCACACTGCACGCGAGCAGTAGTAGCAGCAGCAACAACAACTACACCGGCAAGGGTTCGTCGTCTACTGCTACCGGTGCCGCTGCGGGTAGTAGCACAGCCGGTGCTGCTGGTGCTGCTGCAGCAACCGCCACATCCTCCTCCTGGCGCGATGTACCGCCAACGAGCAGCAGTGGCAGCCATTACCCCCACTACCAGCACCAGTCGTCGCCGGTCATTTCCACCTCCACGAACGTGTCACTCGCCCAAAGCAGCAGCTCCTCGCCACCGTACTCGTACAAGTCGCCCTACTCTAGCCTGTACTCCCGCAGCCCCGGCGCGGTGGAGCGTGATCGCGAGCGGGAAGAGCGTAGCCGCGACCGTTCCGCATCCTTCTCGCACGCGCCAGCCACGACCTCACCGCCGCCCCATCGCACCCAGTCCACGTCCGCCGGCTCGTCCGCCTCCTCCGTATCGGCACAGATCGCACTGCAGTCGCAGACCGCCAGCAGCAACCACCAGTCGTCCTCGGCATCCCACCAGTCCGGCAGTTCCGCCTCCTCAGCCTCCGCGCAACCATCGACCGTGGCGGCGGCTGCCGCCCTGGCCGCCGGTTGGCCCTCCCTCGGCCAGACGCAGCTGCACAGTATGCTCAGCTCGGCGTACGATTCCAGCACCGACATGAACCCGCTCAAGCGCAAGAAGCTCCAGTCGATGTCGAGCATGCTGCGCGACACACCGATCCTGCGCAACGTGCTCGCGCAGGCCAACCCGGCCGACTCGTCGCAGGCGGGCGGTGTGCCTGGGGCTGGGACAGCGCAGGCAACCGTGGCCACGATACAGTCCCAGTACCAGGGCGGCATGAAGTCGGATCCGGACCAGCCGAGCAGTCATCACTCCAACGGCAGTGGTTATAAGTCAATCAAGGATCAACCCCACTCACCGTACGCGGACAAATCGTTCGATGACGATCTGCTCGACTCGCCGCACAACTTTGGCGGCGACGCGCGGCTAGCATCGTACGTGCCGCACCAGCAGCAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACGCGCACCGACATCCTGAACGCGATCGAGTGTGTGCGCAAGGGCATGAGTGCGCTGCAGGCGTCGCGCAAGTTCGGCGTGCCGTCCCGCACCCTGTACGACAAGGTGAAGAAGCTGGGCATTACGACGGGCCGGCCGATCAACCGGGCGCTCAAGCGGTCGCCCAGCTCGGGCGGCAGTCCGGCCTCCTTCCCGTACGGGCTGAGCGGTGCGAGCCACATGTTCGGCGGGCCGGGCAGCGGTGCGCCCGGCGGGCCCGGTGGCCATCCGGGCGGCGACCACCACCAGCAGCTCCCGTCCCAGTCGTCCCAGGAGGACGATGCGGCCGCGGCGGCTGCTGCGGCGGCTGCCGCTGCCGCCGCCGCCATGGCCCACCATCACGAGGCGGGCCGCATGATCAAGCTCGAGCACGGCAGCCACCACGGGCTGCCGCCGACCATCCCGCACCCGGCCGCCGCCCTGCTCGATCCCTCCTTCCTCCAGCAGGCGCTGGAAGCACGCGGCGGCGACATTGCCGGCCGCGAGGCACTGCACGCGATGGCGTTCGCGGCGGCCGCTCACGCCGCCGTCAACGGCATGAGCACGTCCCCGGGTACGCACGGGACGGCCCGCTCGCCGAGCCCGAGCGTGCTGATGAAGTACATGCGCTCCGTTTCGATGAGCTCGCCCGAAGACGATCGGCACCATTCGGCGCAGCAGCAGCAGCAGCAGCGGGAAGCACGCGATCTTGCGGAACGCGAGCGCCGAGAGCATCACAACGGGTCGGAACCGGCCTACGCCAGGCGGGACCACCATCCGATGGAGCAGGACGACGAACCGGGCAGCGACTGTGGCGAACGGCCACCGAGCGGCGGTCCGGCCGAAGGCCAGGACGATCACGTGGAGGATCTGTCCATGGGCCCGAAGCGGGACTCGGAAGAGCGGGACCATCCGTCTCACCACCGCCGGCAGCGGCGGTGTCCGTCGTACGGTCGGCGGTTGCACGGTCGCGATCACCCTCACCTGCACCCTCGCTACCGCAACAACCTCCCCAGCAGCAGCAGCAGCAGGGTGTCATTGTGCCAGCGCCCGGTAAGTTAA
Protein Sequence: MGSSEGQTYCLRWNNHKSNLVEILDALIKMECYVDCTIYVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQEFEMRALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLYDMADLKGRFSKMVDVDQLMRDRDPATTLHASSSSSSNNNYTGKGSSSTATGAAAGSSTAGAAGAAAATATSSSWRDVPPTSSSGSHYPHYQHQSSPVISTSTNVSLAQSSSSSPPYSYKSPYSSLYSRSPGAVERDREREERSRDRSASFSHAPATTSPPPHRTQSTSAGSSASSVSAQIALQSQTASSNHQSSSASHQSGSSASSASAQPSTVAAAAALAAGWPSLGQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMLRDTPILRNVLAQANPADSSQAGGVPGAGTAQATVATIQSQYQGGMKSDPDQPSSHHSNGSGYKSIKDQPHSPYADKSFDDDLLDSPHNFGGDARLASYVPHQQQKPEWKRYKQYTRTDILNAIECVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRALKRSPSSGGSPASFPYGLSGASHMFGGPGSGAPGGPGGHPGGDHHQQLPSQSSQEDDAAAAAAAAAAAAAAAMAHHHEAGRMIKLEHGSHHGLPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPSVLMKYMRSVSMSSPEDDRHHSAQQQQQQREARDLAERERREHHNGSEPAYARRDHHPMEQDDEPGSDCGERPPSGGPAEGQDDHVEDLSMGPKRDSEERDHPSHHRRQRRCPSYGRRLHGRDHPHLHPRYRNNLPSSSSSRVSLCQRPVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00101774;
90% Identity: iTF_00093387;
80% Identity: iTF_00095740;