Basic Information

Insect: Anopheles bellator
Gene Symbol: -
Assembly: GCA_943735745.2
Location: OX030927.2:51372309-51381441[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 9e-05 0.19 11.6 0.0 21 43 102 124 95 133 0.86

2 11 0.004 8.2 6.3 0.1 23 47 132 156 129 163 0.83

3 11 0.0064 13 5.7 0.1 23 52 160 189 157 190 0.86

4 11 0.035 73 3.3 0.0 23 49 188 214 185 219 0.85

5 11 0.87 1.8e+03 -1.1 0.0 23 48 216 241 212 247 0.82

6 11 0.79 1.6e+03 -1.0 0.0 23 49 244 270 241 275 0.81

7 11 0.18 3.6e+02 1.1 0.0 23 52 272 301 269 302 0.85

8 11 0.037 76 3.2 0.0 23 51 300 328 297 330 0.84

9 11 0.054 1.1e+02 2.7 0.0 21 45 326 349 323 355 0.87

10 11 0.00012 0.25 11.2 0.2 23 45 356 378 352 383 0.90

11 11 2.6 5.3e+03 -2.7 0.5 31 45 616 630 604 636 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	9e-05	0.19	11.6	0.0	21	43	102	124	95	133	0.86
2	11	0.004	8.2	6.3	0.1	23	47	132	156	129	163	0.83
3	11	0.0064	13	5.7	0.1	23	52	160	189	157	190	0.86
4	11	0.035	73	3.3	0.0	23	49	188	214	185	219	0.85
5	11	0.87	1.8e+03	-1.1	0.0	23	48	216	241	212	247	0.82
6	11	0.79	1.6e+03	-1.0	0.0	23	49	244	270	241	275	0.81
7	11	0.18	3.6e+02	1.1	0.0	23	52	272	301	269	302	0.85
8	11	0.037	76	3.2	0.0	23	51	300	328	297	330	0.84
9	11	0.054	1.1e+02	2.7	0.0	21	45	326	349	323	355	0.87
10	11	0.00012	0.25	11.2	0.2	23	45	356	378	352	383	0.90
11	11	2.6	5.3e+03	-2.7	0.5	31	45	616	630	604	636	0.73

Sequence Information

Coding Sequence: ATGTTCTATCCGCTGcaaaGTACATTCGAGGATGGCGGAATCGAGGTGTCCCGTACCGAGATGCTTAACCAAGAACAATTGTGTGACAATAAGCACACATTGGCTTTATCACTTACTCTGGGCAATACGCTTTTCAATCTCAACAAAATAAAGTGCCCGCAATGCCGGAAGCGTTTTGATTCGGTTGAAGAAATGCAACAACATCAAACTAAGCACTTGACGGAGAACAAGTTTAAATGTGAAATATGTAGTAAAGAGTTCCCCAGCCATAGTTCTATGTGGAAACACACTAAGGCACACACCGGTGAACGACCCTTTGTATGTCCAATATGTAATAAAGGATTCACACAACTAGCCAACCTTCAACGACATGATCTCGTTCACAATGGACTGAAACCGTTCAAGTGTCCCATTTGCGAAAAGTGTTTCACACAACAAGCAAACATGCTGAAACATCAACTACTTCATACGGGGCTTAAACCATACAAATGTCCAGTGTGCCAGAAAGCGTTTTCGCAGCACGCAAACATGGTCAAACATCAAATGCTTCACACAgGTATTAAGCCGTACAAATGTCCAACTTGTGATAAGGCATTTGCACAGCACGCAAACATGATGAAACATCAGATGCTGCACACCGGATTGAAACCGTACAAGTGTGGCACTTGCGATAAGGCGTTCGCACAACAAGCCAACATGGTTAAACATCAGATGCTGCACACCGGTTTAAAACCATACAAATGCAATACCTGCGACAAAGCATTCGCCCAGCAGGCCAACATGGTCAAACACGAGATGCTTCATACGGGAATTAAACCGTACAAGTGTTCGGTGTGCGAAAAAGCCTTCGCCCAGCACGCGAACATGGTCAAACATCAGATGCTTCACAGCGggATCAAACCGTACAAATGTCCCACCTGCGACAAAGCGTTCGCCCAGCAGGCCAATATGGTTAAGCATCAGATGCTCCATACGGGAGAAAAACCATTCAAATGCAACAGCTGTGATAAGGCTTTCTCGCAACGTGCCAATCTGAAGAAGCATGAGATGGTGCACCTGGGTATCCGGCCGCACACGTGTCCACTCTGCACCAAGTCCTACTCGCAGTATTCCAACCTCAAGAAGCACCTGCTCATGCACCAGAAGCAGGCACTGAAGCAGGAGCAACAAAATGGTCAAGTGACGGTCGTACTGTACAATTGCCAAACCTGTAAGATGCAGTTCGAGGACATTATCGAGTTTGTGCGCCACACAAAACAATGTGATATGAATAACACCGTTCAGCACAGTGTGAAACTGGAGAGCATCAAGAGCGAGGTCGACATCGACGGTAGCTCCAATTCTggcctccagcagcaacagcaacaacagcagcagcatattaTCGCCAACGGTGGTGTTGTAGCGCTAAACGTTAGCCAGCAACAGTTACTAGCCCCTTCACCAGCCCCACCGGCACCAGTCACCAGTCAAATGCATCTTCCGTCGGCCATTCTAACATCGGTCATTtcatcatcgatcggttcgaacgTAACCGCACACTCGCTGGCGAACTCGGTTCACGCAGCCCACGCCGCTAGTCACGTGACCGCCAACGGTGGTATTCTCATTGCGGGCGGATTGCCCACTGTCCATCCGCAcgcccagcaacagcacacTCCGCCCGGTGTACTCACGCAGCACACTCACCCACACGTGCAGCAGgcacatcaacaacaacagcaacagcaacagcagcagcagcaacagcagcagcaacaacaacaacaacagcaagttATTGCCCATCAGCAACTTTCGCCCGTCGGCAACTCTCACCAGCAGGCgacacaacagcagcaacagcatttGGTGctccagcaacagcacaaCCTGCCGAtccacctgcagcagcagctttcgcATCATCTGATCACCACTCATCTGCCGCACCACCCGGGCCAGGAGCATGccggggcggcggccgtcgatcTGCACCACCAGGTCAACTTCCACCATCCGCACATCACACACCTGCCGAATCTGTCGCACAAAATCCTGTCGCCGCTGTTCCACATTCCGacgttcaacaacaaccacagcacATAA
Protein Sequence: MFYPLQSTFEDGGIEVSRTEMLNQEQLCDNKHTLALSLTLGNTLFNLNKIKCPQCRKRFDSVEEMQQHQTKHLTENKFKCEICSKEFPSHSSMWKHTKAHTGERPFVCPICNKGFTQLANLQRHDLVHNGLKPFKCPICEKCFTQQANMLKHQLLHTGLKPYKCPVCQKAFSQHANMVKHQMLHTGIKPYKCPTCDKAFAQHANMMKHQMLHTGLKPYKCGTCDKAFAQQANMVKHQMLHTGLKPYKCNTCDKAFAQQANMVKHEMLHTGIKPYKCSVCEKAFAQHANMVKHQMLHSGIKPYKCPTCDKAFAQQANMVKHQMLHTGEKPFKCNSCDKAFSQRANLKKHEMVHLGIRPHTCPLCTKSYSQYSNLKKHLLMHQKQALKQEQQNGQVTVVLYNCQTCKMQFEDIIEFVRHTKQCDMNNTVQHSVKLESIKSEVDIDGSSNSGLQQQQQQQQQHIIANGGVVALNVSQQQLLAPSPAPPAPVTSQMHLPSAILTSVISSSIGSNVTAHSLANSVHAAHAASHVTANGGILIAGGLPTVHPHAQQQHTPPGVLTQHTHPHVQQAHQQQQQQQQQQQQQQQQQQQQQQVIAHQQLSPVGNSHQQATQQQQQHLVLQQQHNLPIHLQQQLSHHLITTHLPHHPGQEHAGAAAVDLHHQVNFHHPHITHLPNLSHKILSPLFHIPTFNNNHST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00097215;
90% Identity: iTF_00097215;
80% Identity: iTF_00094616;