Basic Information

Gene Symbol
aop
Assembly
GCA_943735745.2
Location
OX030928.2:79120348-79125157[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.016 0.94 9.8 2.6 1 23 416 439 416 439 0.94
2 16 0.0014 0.08 13.1 0.3 2 20 452 470 451 471 0.95
3 16 0.46 27 5.2 0.6 1 23 482 504 482 504 0.97
4 16 0.092 5.3 7.4 2.9 1 13 684 696 684 705 0.82
5 16 3.1e-05 0.0018 18.3 0.6 2 23 761 783 760 783 0.95
6 16 0.00014 0.0079 16.3 0.1 3 20 798 815 796 817 0.93
7 16 2.8 1.6e+02 2.7 0.9 1 23 834 858 834 858 0.91
8 16 0.0071 0.41 10.9 3.8 1 23 882 906 882 906 0.93
9 16 0.017 0.96 9.8 0.2 3 20 931 948 930 950 0.94
10 16 0.62 36 4.8 0.6 2 23 957 978 956 978 0.95
11 16 0.00014 0.008 16.3 3.4 1 21 984 1004 984 1006 0.95
12 16 0.00045 0.026 14.7 0.2 2 23 1012 1034 1011 1034 0.94
13 16 1.8e-05 0.001 19.1 3.4 1 23 1039 1061 1039 1061 0.98
14 16 3.6 2.1e+02 2.4 0.5 1 23 1067 1092 1067 1092 0.95
15 16 3.3e-05 0.0019 18.3 1.5 1 23 1098 1120 1098 1120 0.98
16 16 0.01 0.58 10.4 0.0 1 22 1126 1147 1126 1147 0.95

Sequence Information

Coding Sequence
ATGAAGCTGCTACCGATCCCACTGTCGCCGCTGAatgcgccgccaccgctcggGCTGTGGAACTCGGAGCTCCTGTGGCGCTACCCGCCCGCTCCGCCGAGCCCGCTGGCCGACCTGAAGACgcagctgccgccgcagcTCAACACGGACCCGCGCATCTGGGGCCGGGACGAGGTGGTCGTGTTTCTGCGGTTCTGCGAGCGCGAGTTCGACCTGCCCAAGTTCGACCTGGACCTGTTCCAGATGAACGGCAAGGCGCTGTGCGTGCTGACCAAGAACGATCTCGCCGAGCGCAGCCCGGGCGCGGGCGACGTGCTCCACAACGTGCTGCAGATGCTGATCCGCGACGCGCAAACCCTGCACCGGCACCTCCCGAGCAGCCCGGTCACGCCGACCGGCCGCTACCCGCTGTCGCCCCACAGCCACCCGCCGACCCCGAACTGGAGTGCCCTGGCCCCGCCCGACAGCCCGTTCTTCCACAGCTCGCACCTGCAGCAGTTCATGGCCGCGTCCAACTCGGTCACCCTCAGCCCGGCCCCCTCGATCGACTCGCAGGCCGGAAGCCCCCCGTCGCAGGGCCACGGCGAGGCGACCGTCTTCCAGAagtcctcctcgtcgtccgtcTCGTCGACGGCCTCGTCaagcggcggtggcagtagcggcggcggcggcggcggaggtcctggaagcagcaacggcaacgGAAGCAATGTGTTTAAGACTGTCCGTAAAGTCTGTCGAATATGCAACAatccggacgacgacgatctcATCTCGGTGCAGCTGGTTCAGGAACAGGTATCGATCGCTGAAAAGATTGAGGCGATCACGGGCATCGAGGTGACCAGTGATCGCCGTTTGCCACAAAACATTTGCTTGGATTGCTTCGAGCGGCTACGGCTGGCGTTTGAGCTGCGCCAACAGTGCATTGAAACGGACGCCCGGTTACGCGCATTACTCGAAGCAACACGAACGCCAACCGAAGAGTATTATGTGGAAACACTCGAAGAGGAATGCGAAGAGCAAACGGGGTGTACCGAGCAGGAACTCGCCTGGGAAGTGGAAGAGATTTTCGAGAAGCACAAGACGGAACTGGTGGTCGACGACGATCTTGAAAAACAAGAGTCATGCAACGAACCCCAGGAAGCCGTTCCATTGCCAGAAACCGCACAATCCGAATCCACCTCAAAGCAAAGCGCTTCATGGCGCGAAGACGTTCACTACGTTCTGGTGGGTCTCGATTGCTTCCCCTGCTGCGGCTGCACCATGACTTTCGAAAGCGAGGACGACCTAAAGGTACATTCCATTCgttgccaccggaaacggcagcAGCGCTCGAAGTACCTTCCCGTGCAATGCAGCGTCTGCTATCAGTCGTTTACCAGCGCAAAGGCACTGGAACGCCACCACGCGGACgggcagcgaaaagaaacCTCCCCGCAGTACCAGTGCCTCAGTTGCACCAGTCTCTTCACTGAGCAAGCGAAGTTGTTCGATCATCTCGAGTCTCATGCAGCAGAGGTCCCGTCGATGGTGATGAATGACAAACTGAGTGAAATCCGGATCGAGTTgcagtcgccgccgccggggcaAGCAATGGAAGATGGTGGGGACAGGATAGACGAGGGCAGTGTGGCCGACGCGTTGGATGAAGTGTATTCCATCGTGTTCATGCCGGACGATGAATCGTCCGAACCTGAAGAATACGTCGAGGTAGACGGTAAGGAAGCAGATGACGAATACGAGGATCGCGAactcgacgacgaggaggaaacAAATAGCGTCGCTAATCGCAAGACTGTGCCAAAACAAGGGTCACACTGGGAGCATACCAAATCGCTGCTGCGCAAAGAAATGTACAAAATACAGGAAAAGTACCTGCGGATCGTAGCGAAGCAGGATGGCTATATGATCGTAGAGTTAAAGCAgcaccgttgctgctgctgtgcccaGTTTTTCGAAACTACCCACCAACTCGAGCAACATCTCAAGAACAAACGCCAGCGGAAAACGACGCGACAGCAGAAAAAGGATTCGTCGTCCACTCCGTACACCTGCGAGTACTGTGGGAAACAGTTCAAGTTCCCGGTGGTTTACCATTGCCACCTGCGCAtgcggcagcaacggcagttCTACTTCTGCACGCTCTGCAAAACCGTGATGGAGAGTGAAAAGCGCATGCTCTCGCATATGGTGCACACGCAGAAACACGCTGCGTACTTTAACCTACCGTATGAGGATATTGATGATCGCTACTACTCCGTCCAAATGCCCGGTGTGCGGTGCTGCGGTTGCGGGAAGCAGTTCAAGGACGAGGAAGAGCTCACTGACCACATCCGTGCGTCGCACCCGCCGGAAGCGAGCGATCGAAAACGCACGCATCCCTACGGATGCGATGTATGTGGCCGTCGTTTCATTCGCCAATCGCAGCTCGTTAATCATACGGCCATGGGAACGGTAGACACACCGACGGGCGCTAGGATGCGCCCTGTCTTGCAGCACTACTGCAAGTTGTGCTCGTTCGAAACCCCAAACGCGCGTCGAATGGAGCTTCACCAGCGCAGTGCGATCCACAGTCAGGTCCTCTCGTCGATGCGTCTCTGTCCGCTTGAAAACAGCGCCATAAAGCTCGACCCGGTGCGCTACTGTTGCTTCGAGCAGTGCAAGAAGTCCTTCACGGATCTCATCGAGCTGTGTGCGCACGTTCGCGGGTTCCACTCGGAGgcgttggccaaaaacaaacgcatcGCACGCGAGCAGGATGAAGAGAGCGGCGCGGGTACGGTCGCGTGTGATGTTTGCGGTCTGCGGCTGAAACATCTGACCGCGCTCAAAAGACACCAATCGTTGCGTGGCGCGCAGGTTTGTGTCTGCTCGGTCTGTGGCATCAAAAAGCGGTCCCGcgccgtgctgctggtgcacgAGCGGACACACACCGGGGAACGACCGTATTCCTGCGATGAATGCGACAAATCCTTCTCCTCGATCACGTCGCTGCGCTCACACCAAAAGTGTCACAAGCCACGCGAGCTGGAGTGCGACGTGTGCCTGGAACGGTTTGCGCGGCTGGAAAATCTGAAACGCCACGTACAGCTGAAGCACGGCGAAGCGACGCACCAGTGCCAGTCGTGCCCGAAGAAATTTAAAACGCGCGACACTCTCGCCATGCATCTGCGAACGCACACCGGCGAGAAGCCGTACAAATGCCGGACGGAGGGCTGCGAAAAGTGGTACGTCAACGTgtccgaccgacggcggcacgAGATGTCGAACCACACGATGGAGCGGCCGCACAAATGTAGCTACTGCGACGCTGCGTTCATCCGGAAGCGCCAGTTGGCCATTCACGAGCGGCGCCACACGGGAGAACGGCCGTTCGTATGTTCCGACTGTGGCAAGGGCTTTTTGGACGCGGTGATCCTGCGCAAGCACATCAGAACTGTCTGCCCGAACGCCGCGAGCGATGGAACTGTTGCGCCAGGATAA
Protein Sequence
MKLLPIPLSPLNAPPPLGLWNSELLWRYPPAPPSPLADLKTQLPPQLNTDPRIWGRDEVVVFLRFCEREFDLPKFDLDLFQMNGKALCVLTKNDLAERSPGAGDVLHNVLQMLIRDAQTLHRHLPSSPVTPTGRYPLSPHSHPPTPNWSALAPPDSPFFHSSHLQQFMAASNSVTLSPAPSIDSQAGSPPSQGHGEATVFQKSSSSSVSSTASSSGGGSSGGGGGGGPGSSNGNGSNVFKTVRKVCRICNNPDDDDLISVQLVQEQVSIAEKIEAITGIEVTSDRRLPQNICLDCFERLRLAFELRQQCIETDARLRALLEATRTPTEEYYVETLEEECEEQTGCTEQELAWEVEEIFEKHKTELVVDDDLEKQESCNEPQEAVPLPETAQSESTSKQSASWREDVHYVLVGLDCFPCCGCTMTFESEDDLKVHSIRCHRKRQQRSKYLPVQCSVCYQSFTSAKALERHHADGQRKETSPQYQCLSCTSLFTEQAKLFDHLESHAAEVPSMVMNDKLSEIRIELQSPPPGQAMEDGGDRIDEGSVADALDEVYSIVFMPDDESSEPEEYVEVDGKEADDEYEDRELDDEEETNSVANRKTVPKQGSHWEHTKSLLRKEMYKIQEKYLRIVAKQDGYMIVELKQHRCCCCAQFFETTHQLEQHLKNKRQRKTTRQQKKDSSSTPYTCEYCGKQFKFPVVYHCHLRMRQQRQFYFCTLCKTVMESEKRMLSHMVHTQKHAAYFNLPYEDIDDRYYSVQMPGVRCCGCGKQFKDEEELTDHIRASHPPEASDRKRTHPYGCDVCGRRFIRQSQLVNHTAMGTVDTPTGARMRPVLQHYCKLCSFETPNARRMELHQRSAIHSQVLSSMRLCPLENSAIKLDPVRYCCFEQCKKSFTDLIELCAHVRGFHSEALAKNKRIAREQDEESGAGTVACDVCGLRLKHLTALKRHQSLRGAQVCVCSVCGIKKRSRAVLLVHERTHTGERPYSCDECDKSFSSITSLRSHQKCHKPRELECDVCLERFARLENLKRHVQLKHGEATHQCQSCPKKFKTRDTLAMHLRTHTGEKPYKCRTEGCEKWYVNVSDRRRHEMSNHTMERPHKCSYCDAAFIRKRQLAIHERRHTGERPFVCSDCGKGFLDAVILRKHIRTVCPNAASDGTVAPG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00097242;
90% Identity
-
80% Identity
-