Basic Information

Gene Symbol
dmd-4
Assembly
GCA_943735745.2
Location
OX030928.2:11264652-11265913[+]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.1e-25 1.8e-21 75.4 10.4 1 47 42 88 42 88 0.98
2 2 0.41 1.5e+03 -1.1 1.7 3 11 284 292 281 294 0.84

Sequence Information

Coding Sequence
ATGAGCAACGCAAATACCGCGGGAAGTAGTGGACGAAGCGCTTCAGGCAAGACTTCCGGTTCTGGTGTGACAGGAGTAGTGGCAGCGACGGCTGTGCTCAATAGTGCTGGTGGTCAGAATTTTCGAGTTCCTAAGTGCGCTCGTTGTCGCAACCATGGGGTTATTTCCGGTCTCCGGGGACACAAGAAACAGTGCACGTACCGGAACTGCCGCTGTGCCAAGTGCGAACTGATACTTTCGCGACAGAAGATAATGGCCGCACAGGTTGCCCTCAAAAGGCAACAAGCGGTCGAAGATGCTATAGCGCTACGGTTGGCCTCCACCGAGACAGGCACACCGCTGGAGGCACTTCCGCCGGGCAAAATATACGGAATGACCGTCACGGAACCCTGCCCCTCCCCGTCCCCCTCGTCCTCCACCGCTTCGGTGGATATCATTTCGTCGACATCGTCCGACGCTCCGACGGGAGGAGGATTTGAGGCAAGCGAAGATTTGAGACTAGGGCGACCGAAAGAAACGGCGAATGTGACCGTGTCGCAAAACGCACTGGACATGCTGGCTCAGCTGTTTccccaccgaaaacggtcCGTACTGGAGCTGATCCTGAAGCGATGCGATTCCGACCTGCTGAAGGCGATTGAGCAGTGCAGTCAAGCGCAAAGCACTTCCAGCGCCTTCAAGCCACCCGTTACGACCGCCGTTTCGACCGTCCCGAATCCTCCGTTGATTCAACCCAGCGGGGCCAGCGGATACTCGCCCTTCATTGCGTACCCGAAGTGGCTGCTGCCGATGTCCATTCCGGTGTCTTTCAGCCACATTGCGCCAAACCTGGCGCCTCGCTGCACTTTACCGAACTGTGTCATGTGTGTCCATCATCCAATGTAA
Protein Sequence
MSNANTAGSSGRSASGKTSGSGVTGVVAATAVLNSAGGQNFRVPKCARCRNHGVISGLRGHKKQCTYRNCRCAKCELILSRQKIMAAQVALKRQQAVEDAIALRLASTETGTPLEALPPGKIYGMTVTEPCPSPSPSSSTASVDIISSTSSDAPTGGGFEASEDLRLGRPKETANVTVSQNALDMLAQLFPHRKRSVLELILKRCDSDLLKAIEQCSQAQSTSSAFKPPVTTAVSTVPNPPLIQPSGASGYSPFIAYPKWLLPMSIPVSFSHIAPNLAPRCTLPNCVMCVHHPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00100978;
90% Identity
iTF_00097089;
80% Identity
-