Basic Information

Insect: Anopheles atroparvus
Gene Symbol: -
Assembly: GCA_015501955.1
Location: CALTRM010000063.1:1126747-1128846[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.009 0.71 9.1 2.5 2 23 248 270 247 270 0.91

2 14 0.00039 0.031 13.4 0.5 2 22 288 308 287 308 0.94

3 14 0.00041 0.032 13.4 2.5 1 20 313 332 313 335 0.93

4 14 0.07 5.5 6.3 0.6 1 23 341 364 341 364 0.92

5 14 0.00096 0.076 12.2 0.8 1 22 376 397 376 397 0.95

6 14 0.0073 0.57 9.4 1.0 1 23 401 424 401 425 0.96

7 14 0.1 7.9 5.8 0.1 3 23 436 457 434 457 0.93

8 14 0.0011 0.083 12.1 1.4 1 21 473 493 473 494 0.95

9 14 2.3e-06 0.00018 20.5 0.6 1 23 501 523 501 523 0.98

10 14 3.8e-06 0.0003 19.8 1.9 1 23 529 551 529 551 0.98

11 14 7e-07 5.5e-05 22.1 3.5 1 23 558 580 558 580 0.96

12 14 1e-05 0.00079 18.4 3.5 1 23 586 608 586 608 0.97

13 14 3.5e-08 2.7e-06 26.2 0.5 1 23 614 636 614 636 0.98

14 14 3.4e-06 0.00027 19.9 1.8 1 23 645 668 645 668 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.009	0.71	9.1	2.5	2	23	248	270	247	270	0.91
2	14	0.00039	0.031	13.4	0.5	2	22	288	308	287	308	0.94
3	14	0.00041	0.032	13.4	2.5	1	20	313	332	313	335	0.93
4	14	0.07	5.5	6.3	0.6	1	23	341	364	341	364	0.92
5	14	0.00096	0.076	12.2	0.8	1	22	376	397	376	397	0.95
6	14	0.0073	0.57	9.4	1.0	1	23	401	424	401	425	0.96
7	14	0.1	7.9	5.8	0.1	3	23	436	457	434	457	0.93
8	14	0.0011	0.083	12.1	1.4	1	21	473	493	473	494	0.95
9	14	2.3e-06	0.00018	20.5	0.6	1	23	501	523	501	523	0.98
10	14	3.8e-06	0.0003	19.8	1.9	1	23	529	551	529	551	0.98
11	14	7e-07	5.5e-05	22.1	3.5	1	23	558	580	558	580	0.96
12	14	1e-05	0.00079	18.4	3.5	1	23	586	608	586	608	0.97
13	14	3.5e-08	2.7e-06	26.2	0.5	1	23	614	636	614	636	0.98
14	14	3.4e-06	0.00027	19.9	1.8	1	23	645	668	645	668	0.98

Sequence Information

Coding Sequence: ATGGACATCCTGATCGAGCCGGACTGCTACAAAGTGTGCCGAATTTGCATGGAAAGCTGCGAGGATGATTTCGTGTGCGTTTACGACGAGTTTGAAGATGTGATACTCTGCGAAGTCATCAAGGAGTGTGCACACGTTGAGATACGAAAGAACGATGCGCTGCCGCGGAACGTGTGCCGAAGCTGTGCGCAGTATATGCTGATCGCTTACCACACCATCCAGAAGTGCCGTGAGTCAGACGTGAGACTGCGGTCCATTTTCAAGCACGAGCTTAACCTACACTGCAGTACGAAGATGGGCGGCACTATGCCGAGATGTGCTGGGCTGCAGGCAGAAGATATGGACCCGCCGGACTATGAGTTTCTACTTTCCGACGCGTACGACGACATGCTGCTGGAAAATGGTGGTCGAATTCTGCTAGAGGATGGCAATAGATGCACTTTCACACCTCCGATCGATAAGGACAATCGTTGCCATGACGATAACACCTACTCGGGGCAGTATCATTCTCCACAGGATCAACCGCAGTATCGGCTGGAGGCGGAGCAAGTGCATCAGCAACAGGAGTTGATCCCGGAACAGCAACCTTTGCAATCATTTCAATTGGATGACGCAGAACTCGCACAAGCGTACGAGCAATGCGAACCCATGCGGGATTCAAACGGAGCTGTCGACGCGACGTCGTACGAGTCCAGTGAAACGAATGAGGACGAACCCGTGTTTGTTCCGCAAGAGCAGAAGCAGTGCTGCGGGTGCAAGAAGTTCTTCGACAGCGAGCAGAGCCTTCGCGAACACTCGCAGGCCGTGCACCTCCCAGGAGTGCCCTCGACCGACTGTCCTATGGCCGCGGAAGAGTCGTTGCGCTGTGCGGTGTGCTACAGAAAGTTCAGCACATTGAATCTACTAAAGGAACATCAACGATCCGTCAACCGCAAGTACACGTGTGCACAGTGCGGCAAGCGTTTTATGACCCAGGCCAATCTGGACACGCACAGCAAGTGCCACAAGAATAAGGAAATGTACAAATGCTGCGGGTGCCGGATGGATTTCGAGCAGGAGCTGGATCTTCTCGTTCACTCACAGGAAGTCCACCGGCCCGAGCGGACCGTCAACTCGGAAAAGGCGTTCGAATGTGAAACATGCTACCGTCGGTATCCAACGAGAAAGTCCCTAGCAACGCACAAACGCATGATACGCCAGTTTCAGTGCCAGCTTTGTGGGGCGATATTTATGAAGCAGCTCTTTCTTACCTTACACCTGGAGCGGGTGCACCATGGCGAAGCGATGGAGCAGCGGCGCCGCTGCTGCGGCGGTTGCCGCGAGGTGTTCCTCGACGCGGCCGCTCTGCGCGAGCATGCCATGCGCGTTCACAAACCGGACGGTTCGGGCGGGTCGGGcaccgacgaagggaaaccgttcgagtgcgacgtctgccggaagcggttctcctcgatgttctttctgctgcagcaccagcaaaaggtgtaccgggaaaagtgctacccgtgctccatttgcggccgcacgttcggcagagcgcacgacctgtccaaccacgaaacgacccactcgagcgaaatgcccttcgagtgcggcgtctgcgggcgccggtttaagaataagctttacctgaaaaaccatcgcaagctgcatacgagcagcACGAAGGATCACGCTTGCGACGAGTGTGGCAAATGCTTCCGCACGAAGGAACTGctgaagacgcacctgataagccactcgcaggagcgcaaacactcctgcaccatctgcccagccacgttcaagcggttgcagtgtctgaagattcacatgcgcatccacacgcgcgagaaagcgttcgaatgtccgatctgccggaagcgctacgtgcagtcgtccgatctgaagcgccacatgctgatacacaatccgggcgatgaagGAAAACCGTTTCAATGCGAGTACTGCCTCCGGCGGTATCCTCGTAAGGATTATCTTAAAGTGCATATCCGCAAGCAGCACTCGCATAAGCCAGAGGCGAACATGGGTCCGTATAATTCGGTGGCTGGCGAGCGACATGAACCTGCGATTTCGGTGGGAGATTTTACGGATTGCTGA
Protein Sequence: MDILIEPDCYKVCRICMESCEDDFVCVYDEFEDVILCEVIKECAHVEIRKNDALPRNVCRSCAQYMLIAYHTIQKCRESDVRLRSIFKHELNLHCSTKMGGTMPRCAGLQAEDMDPPDYEFLLSDAYDDMLLENGGRILLEDGNRCTFTPPIDKDNRCHDDNTYSGQYHSPQDQPQYRLEAEQVHQQQELIPEQQPLQSFQLDDAELAQAYEQCEPMRDSNGAVDATSYESSETNEDEPVFVPQEQKQCCGCKKFFDSEQSLREHSQAVHLPGVPSTDCPMAAEESLRCAVCYRKFSTLNLLKEHQRSVNRKYTCAQCGKRFMTQANLDTHSKCHKNKEMYKCCGCRMDFEQELDLLVHSQEVHRPERTVNSEKAFECETCYRRYPTRKSLATHKRMIRQFQCQLCGAIFMKQLFLTLHLERVHHGEAMEQRRRCCGGCREVFLDAAALREHAMRVHKPDGSGGSGTDEGKPFECDVCRKRFSSMFFLLQHQQKVYREKCYPCSICGRTFGRAHDLSNHETTHSSEMPFECGVCGRRFKNKLYLKNHRKLHTSSTKDHACDECGKCFRTKELLKTHLISHSQERKHSCTICPATFKRLQCLKIHMRIHTREKAFECPICRKRYVQSSDLKRHMLIHNPGDEGKPFQCEYCLRRYPRKDYLKVHIRKQHSHKPEANMGPYNSVAGERHEPAISVGDFTDC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00105988; iTF_00105962; iTF_00107876; iTF_00096531; iTF_00109293;
90% Identity: -
80% Identity: -