Basic Information

Insect: Anopheles atroparvus
Gene Symbol: -
Assembly: GCA_015501955.1
Location: CALTRM010000050.1:446233-448711[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.018 1.4 8.2 1.5 2 23 130 151 129 151 0.97

2 15 1.1e-05 0.00088 18.3 4.4 1 23 233 255 233 255 0.97

3 15 2.3e-06 0.00018 20.4 2.3 2 23 320 341 320 341 0.97

4 15 0.19 15 4.9 0.7 1 10 410 419 410 429 0.79

5 15 3.5e-07 2.8e-05 23.0 1.7 1 23 494 516 494 516 0.97

6 15 1.7e-08 1.3e-06 27.2 0.7 1 23 522 544 522 544 0.99

7 15 3.5e-09 2.7e-07 29.3 1.0 1 23 550 572 550 572 0.98

8 15 2.4e-09 1.9e-07 29.8 1.8 1 23 578 600 578 600 0.98

9 15 9e-05 0.0071 15.4 0.3 2 23 603 624 602 624 0.95

10 15 9.3e-05 0.0073 15.4 0.4 1 23 630 653 630 653 0.97

11 15 7.7e-09 6.1e-07 28.2 4.7 1 23 659 681 659 681 0.99

12 15 6.6e-05 0.0052 15.9 1.4 1 23 687 709 687 709 0.99

13 15 1.1e-08 8.4e-07 27.8 1.8 1 23 715 737 715 737 0.99

14 15 6.7e-07 5.2e-05 22.1 1.3 1 23 743 765 743 765 0.99

15 15 9.7e-09 7.6e-07 27.9 2.0 1 23 771 793 771 793 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.018	1.4	8.2	1.5	2	23	130	151	129	151	0.97
2	15	1.1e-05	0.00088	18.3	4.4	1	23	233	255	233	255	0.97
3	15	2.3e-06	0.00018	20.4	2.3	2	23	320	341	320	341	0.97
4	15	0.19	15	4.9	0.7	1	10	410	419	410	429	0.79
5	15	3.5e-07	2.8e-05	23.0	1.7	1	23	494	516	494	516	0.97
6	15	1.7e-08	1.3e-06	27.2	0.7	1	23	522	544	522	544	0.99
7	15	3.5e-09	2.7e-07	29.3	1.0	1	23	550	572	550	572	0.98
8	15	2.4e-09	1.9e-07	29.8	1.8	1	23	578	600	578	600	0.98
9	15	9e-05	0.0071	15.4	0.3	2	23	603	624	602	624	0.95
10	15	9.3e-05	0.0073	15.4	0.4	1	23	630	653	630	653	0.97
11	15	7.7e-09	6.1e-07	28.2	4.7	1	23	659	681	659	681	0.99
12	15	6.6e-05	0.0052	15.9	1.4	1	23	687	709	687	709	0.99
13	15	1.1e-08	8.4e-07	27.8	1.8	1	23	715	737	715	737	0.99
14	15	6.7e-07	5.2e-05	22.1	1.3	1	23	743	765	743	765	0.99
15	15	9.7e-09	7.6e-07	27.9	2.0	1	23	771	793	771	793	0.98

Sequence Information

Coding Sequence: ATGGCCGTGGTCTTCGCTGTAGCTCATTCAATGCTCGGTAAATATGCCGATGCGAGTTCCAGCTCGATGATAAACCTGGAAAATGGTCTCCGGAACCGCGCACTGTACCATCAGAACATGATGGGTATGAATCTGATGGCCGAGTTCTACCACAACCCTCCGTCTCTTACGAATCCGTCCGTCAGCAGTGGCGGTGGCGGCGGTGCCGGCGTTGGAGCAGTTTCTATGATGTCACAGTCGCAAAAGATGCTCAACAGTCTGTCGGTAAGCGCTGGAAACGTTCTGCAATCGCAGCACACCGGCAACGCTCCCGTAGTGACGACGGTAGCGATAGGAGCTGCTCCAACCACATCGAGTAGTGCATCGCAGCAACCGCTGGCGCAGCTGCAATGTCAACTTTGTCAAAAGTACTGCATTTCCGGCACCGTACTCGCACAGCACATGAAAACACACGAAAATGACTACTTGCCAGCGAGGGAAGAGGTCGGCCCGAGTGGCGGCTACAGTCAGCAACAATCGATACCGTCCGCTTCCTCGCTAGTAACGGCAGTGGCATCGAGTAGCAAAACTAGTCCACCGCTGCTGACACAGCACAGCATCAAGAGTGAGTACATTGGAGGAAATGCGACTGCCACGGCTGTGTCCCTGGCGGTAGGGGCAGGCCAGTTTTCTCCTGCGTACGGcataacgaagcagtttgattgccacatttgtcacaaatcgttcatgacaatgatgaacctcaatctgcacatgaaAATTCACGAGGAGTTGAAATCGGCTGCGGCAAGCCACATCTACTCCCATGCGGCGGGtgccaccacgacaacgtcgaacaattttcatcaccaccatcatcaccagcatcaaaatcatcacaacaacaacccgcaacagcagcagcagcagcacattcctatgctaggatcatcaataggagcgactgtaaacgatggcTCGTGCCAGATTTGCCATAAAACTTTCAGCACGGTGGAACAATTTACGGCACACATGAAGATTCACGAGAATGAGTTTAAAAACCGTGCCCTGTAccactccggtagctcaaatgccgtcggtagcagtagcagcagcagcagcagcgtagtgcatagcgtcacgacgccgacaacgacggcagGGACAGATCCGTTTTACCCTGCAACGCAACCACTGCAGATCCTCGCTCCGCAGACACCGGcaccgcagcttgacgccacgaagggccaccgatgtccaatctgccacaaaatgtccaacaacatcatcgaacacattaagcaacacgaaggacagctaacgatgggtgacggtggggcaaacagcagaagcggaacggccccgtcaccaccgggggttgtgggttcacctggaggccccaccaccgcagtgtatccacaattgaacgaagattcacagtcatcgctcgagggagacgacagcgagggccaggctggcgaggggcccgagagccgaaagcacgagtgtctgatctgccacaaaaagttctcgagctcgggaaacttggccatccatatacgggtgcactcgggcgagaagccgttcaaatgtaccgtgtgcggcaagggtttcatccagtccaacaacctggcgacgcacatgaaaacgcacacgggcgaaaaaccttacgcgtgcacgatctgcgggaaaaattttagccagtcgaacaacctgaagacacacatccggacgcacaccggagaaaagccttacgcgtgcacgatctgcgggaagcggttcaaccagaagaacaatctgaccacgcacatgcgcacgcaccagctggtgtgcatggtgtgcggcgtgcagttcatgcatccgtccgacctggccaaccacatgaaatttcacaacgacgaaaagccgtacatctgctcggtatgcaacaaggtgtacctcaacctggacgagctgaccgagcacatgaagaagacgcacaaccaggtcaagccgtaccggtgccacatctgcgacaaaacgttcacccagtcgaacaacctgaagacgcacatcaagacgcacatattccaagatccgtacaagtgccagatgtgctcgcgctccttccagaaggaggacgactattcgcagcatatgctcgtgcacacggccgataagccgtacgagtgcacgtactgcggcaagcggttcatccagtccaacaacctgaagacgcacgtccgcacgcacacgggcgaaaagccataccggtgttcgatctgcgcgaagctgttcaaccagaagaacaatctcaatacgcacatgcgcatccacaccggcgagaaaccgttcgaatgtaccatctgcgacaagcgcttcaaccagtcgaacaatctgaacaaacacatcaaaacgcatggccaggagaaggatgagcagcagcacgcgagttga
Protein Sequence: MAVVFAVAHSMLGKYADASSSSMINLENGLRNRALYHQNMMGMNLMAEFYHNPPSLTNPSVSSGGGGGAGVGAVSMMSQSQKMLNSLSVSAGNVLQSQHTGNAPVVTTVAIGAAPTTSSSASQQPLAQLQCQLCQKYCISGTVLAQHMKTHENDYLPAREEVGPSGGYSQQQSIPSASSLVTAVASSSKTSPPLLTQHSIKSEYIGGNATATAVSLAVGAGQFSPAYGITKQFDCHICHKSFMTMMNLNLHMKIHEELKSAAASHIYSHAAGATTTTSNNFHHHHHHQHQNHHNNNPQQQQQQHIPMLGSSIGATVNDGSCQICHKTFSTVEQFTAHMKIHENEFKNRALYHSGSSNAVGSSSSSSSSVVHSVTTPTTTAGTDPFYPATQPLQILAPQTPAPQLDATKGHRCPICHKMSNNIIEHIKQHEGQLTMGDGGANSRSGTAPSPPGVVGSPGGPTTAVYPQLNEDSQSSLEGDDSEGQAGEGPESRKHECLICHKKFSSSGNLAIHIRVHSGEKPFKCTVCGKGFIQSNNLATHMKTHTGEKPYACTICGKNFSQSNNLKTHIRTHTGEKPYACTICGKRFNQKNNLTTHMRTHQLVCMVCGVQFMHPSDLANHMKFHNDEKPYICSVCNKVYLNLDELTEHMKKTHNQVKPYRCHICDKTFTQSNNLKTHIKTHIFQDPYKCQMCSRSFQKEDDYSQHMLVHTADKPYECTYCGKRFIQSNNLKTHVRTHTGEKPYRCSICAKLFNQKNNLNTHMRIHTGEKPFECTICDKRFNQSNNLNKHIKTHGQEKDEQQHAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00094169;
90% Identity: iTF_00094169;
80% Identity: iTF_00094169;