Aatr003985.1
Basic Information
- Insect
- Anopheles atroparvus
- Gene Symbol
- Hr39
- Assembly
- GCA_015501955.1
- Location
- CALTRM010000053.1:16917-19962[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.96 2.2e+03 -3.7 2.2 63 132 249 267 216 303 0.38 2 4 3 6.8e+03 -6.4 25.8 42 125 334 415 320 441 0.48 3 4 2e-08 4.5e-05 21.7 0.0 1 25 508 532 508 673 0.58 4 4 1.2e-75 2.6e-72 243.1 0.5 202 408 674 875 667 875 0.97
Sequence Information
- Coding Sequence
- ATGGAAGAATCGGACGAGTCCGACACGGAGCTGTCGAACATCGAAAAGACGGTGTCCGCCGTCGCCCTCACGAACGGGGTGAACATGCGGGAGGAGCGTACCGCCAGCAAGGGCGCCCCGCGGCCAATGTCCTGGGAGGGCGAGCTGTCGGAGCCGGAGGAGCCGATGTTGGTGGACAACGAGAACAGCAGCTCGGGTTCGAGCGTGGGCAAACTGGCGAACGCACCGTCTTCCCCCGTGGCCATGGTCGTGCCAAAGCAGGAGGAGGACCACGACGCACCGACGAGCGGACCCGGGATCACTGAACCGCTCGCCCTCACTACCACCTCGCACGTTATCGGTTACAGCAACGTCATACAGCACGGCCACGGGCTGAGGAGTGCGCATGGTGGCTCCGGTGGAAACAGCAGCTCCAGCAACTCTCCACTTCCACACCGCATGCTGATCAAGCCGGAAGCTGGGCTTCCCCTGATCAACCCGGGCCTGGCGTACAACGTCGTAGGGCTGGCTCATCCATCCTGCAACATTCCAGCGTCGGTCAGTGGGGCACCGTCCATGAAGAAGGGACTGCCGGACGCGATAAACTTAAAATACGAGCTTCCGCCCGGTGGTGTAGGAGACCCGGGCGGCGGTGGAGGAAGCGCCCTGCCACCGAATGCTATTCACTCGCCGCTTCTGGTCCGCTCGAAGACAACACTGCTGCCGGCAAACCCGAGTCCCGACTCGGCGATCCATTCGGTGTACACGCACAGCTCGCCCAGCCAGTCCCCGCTCACGTCCCGCCACGCTCCGTACACTCCCTCTCTCAGCCGCAATAACAGCGATGCGTCACACAGTAGCTGCTATTCGTACAGTTCAGAGTTCAGTCCGACGCATTCGCCCATCCAGGCACGGCACAGCATATTCGCCGGGGGCGGAGTAGGCAACGGAGGCCCAGGGATTGCCTCGTTCAACGGgtctccgctgcatcattcagtattatacaaaccgatgctggacagcgagcagcatcagcaccatcaacagcatcagcaccatcaacagcatcaacagcaccaacagcatcaacagcatcaacagcatcaacagcatcaacagcagcatcatcaccagcatcagcagcatcagcagcatcagcagcatcagcagcatcagcagcatcagcagcatcagcagcaacatcaacagcatcagcagcaacagcaacagcatccgcagcaacaacagcaagccctaaaacaggaggagctcctgtacgatggggagcatcttccatctcctggcatttcccgacaacaactgatcaatagCCCgtgtccaatttgtggcgataaaatctccggtttccattacggcatcttttcgtgcgagtcgtgcaaggggttcttcaagcgcacggtgcagaaccgtaagaactacgtgtgccttaggggggcggcctgtccggtggcgatagcgacgcgcaaaaagtgtcccgcctgccggttcgagaagtgccttcagaagggaatgaagttggaagCTATTCGCGAGGATCGAACGCGCGGTGGTCGCTCGACGTACCAGTGCTCGTACACCCTGCCGGGGCCGCTGGTGAATTCGGCGGGCATGCAGGGTCAGGGTGCCGACTCGCCCGGTGTCGCTCCATTCCAGTACGGAGGGTCTGTCCGATCGCCGTACGTTGCTGGCGGCGGCGGTGTTGGTGTTGCTTCAGGGCCGCAGATGAAGGTGGAAGCTCAGGAAAGCACGAGTGGTATGATGATTTCCGGTGGTGGAAACGGTGGTAGCAACGGTGGAGTGAACGGGATTAACAATGGACCAAGTGGCGAGGGAAACAGTGCCTCCAGCGTTGATGGAAATCATATGCCACCAGGCATTCCAGTTCTCTTACAGGAAATCATGGACGTTGAACCATTGTGGCAGTACAATGCAGCGGAGCTGGCTCGGCTGAATCAGCCTCCGCCGGTGACTAGCTCGTCGGCTATCGCGACCAATCCCCTGCTCTCCAGTGCCGGTATCTCGACGGAGAACAGCCCCGATTTGATCGCGAACCTCTGCAACATTGCTGACCACCGACTGTACAAAATCGTCAAGTGGTGCAAGAGTTTGCCGCTTTTTAAGAACATTTCGATTGACGACCAGATCTGCCTGCTGATCAACTCCTGGTGTGAGCTGTTGTTGTTTTCCTGCTGCTACCGTTCGATTACAACGCCGGGAGAGATCAAGATCTCCCTTGGGAAGTCGATCACGCTGGAGAAGGTGAAGAATAGTGGCCTGCAGACTTGCATCGAGAGAATGTTAAATTTGACCGATCATCTACGTCGATTGCGCGTTGACAAGTACGAGTACGTGGCGATGAAGGTGATCGTACTGCTTTCATCGGACACATCCGAGCTGAAGGAGTCGGAGAAGGTTCGAGCGAGCCAGGAGAAGGCCCTGCAAGCTCTGCAAGCGTACACGTTGGCCTACTACCCGAAATCGCCGGCCAAATTTGGGGAGCTGCTGCTGCGGATTCCAGAATTACAGCGAACTTGTCAGGTCGGAAAGGAAATGCTCAACATCAAATCGAAGGATGACGAAGAGCCCTCATTCAACCTGCTGATGGAGCTACTGCGCGGAGAGCATTGA
- Protein Sequence
- MEESDESDTELSNIEKTVSAVALTNGVNMREERTASKGAPRPMSWEGELSEPEEPMLVDNENSSSGSSVGKLANAPSSPVAMVVPKQEEDHDAPTSGPGITEPLALTTTSHVIGYSNVIQHGHGLRSAHGGSGGNSSSSNSPLPHRMLIKPEAGLPLINPGLAYNVVGLAHPSCNIPASVSGAPSMKKGLPDAINLKYELPPGGVGDPGGGGGSALPPNAIHSPLLVRSKTTLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHSIFAGGGVGNGGPGIASFNGSPLHHSVLYKPMLDSEQHQHHQQHQHHQQHQQHQQHQQHQQHQQHQQQHHHQHQQHQQHQQHQQHQQHQQHQQQHQQHQQQQQQHPQQQQQALKQEELLYDGEHLPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVAIATRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPGPLVNSAGMQGQGADSPGVAPFQYGGSVRSPYVAGGGGVGVASGPQMKVEAQESTSGMMISGGGNGGSNGGVNGINNGPSGEGNSASSVDGNHMPPGIPVLLQEIMDVEPLWQYNAAELARLNQPPPVTSSSAIATNPLLSSAGISTENSPDLIANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCYRSITTPGEIKISLGKSITLEKVKNSGLQTCIERMLNLTDHLRRLRVDKYEYVAMKVIVLLSSDTSELKESEKVRASQEKALQALQAYTLAYYPKSPAKFGELLLRIPELQRTCQVGKEMLNIKSKDDEEPSFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00094042;
- 90% Identity
- iTF_00094042;
- 80% Identity
- iTF_00094042;