Basic Information

Insect: Anopheles arabiensis
Gene Symbol: -
Assembly: GCA_016920715.1
Location: NC:53395746-53399939[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.52 5.8e+02 0.1 1.9 12 29 18 35 10 47 0.73

2 10 0.18 2e+02 1.6 4.8 17 40 52 72 38 80 0.83

3 10 3.1 3.4e+03 -2.4 0.3 18 24 78 84 73 86 0.82

4 10 2.3e-06 0.0026 17.2 3.7 7 43 96 128 91 129 0.86

5 10 0.0061 6.8 6.3 0.3 18 43 136 163 133 164 0.89

6 10 0.065 72 3.0 0.5 15 30 310 325 298 337 0.82

7 10 0.0022 2.4 7.7 0.1 14 35 371 389 362 393 0.80

8 10 0.9 9.9e+02 -0.7 0.4 18 32 420 436 418 443 0.67

9 10 5.5e-05 0.061 12.8 0.0 17 41 452 473 445 474 0.91

10 10 6.6e-06 0.0074 15.8 0.3 18 44 481 504 478 504 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.52	5.8e+02	0.1	1.9	12	29	18	35	10	47	0.73
2	10	0.18	2e+02	1.6	4.8	17	40	52	72	38	80	0.83
3	10	3.1	3.4e+03	-2.4	0.3	18	24	78	84	73	86	0.82
4	10	2.3e-06	0.0026	17.2	3.7	7	43	96	128	91	129	0.86
5	10	0.0061	6.8	6.3	0.3	18	43	136	163	133	164	0.89
6	10	0.065	72	3.0	0.5	15	30	310	325	298	337	0.82
7	10	0.0022	2.4	7.7	0.1	14	35	371	389	362	393	0.80
8	10	0.9	9.9e+02	-0.7	0.4	18	32	420	436	418	443	0.67
9	10	5.5e-05	0.061	12.8	0.0	17	41	452	473	445	474	0.91
10	10	6.6e-06	0.0074	15.8	0.3	18	44	481	504	478	504	0.92

Sequence Information

Coding Sequence: ATGCAGGATTTAGAAAAACATGCGAAAGTGCAACACTGTCCAACgaaacagcatcagcagcagtttCATTACTGCTCAGCGTGTCAGAAATCGTTCAAAACCAACCGTGGCCTACTGCAGCACAATACAATCTATCACGAGTCCCAAGAATTGCACCGCTGCTACATCTGTGAGCGACAGTTTCTCACAAAAACCAACCTACAAAACCATATGCGCTTTCACAAGGATCATGTGTGCAGCTTTTGCAACAACGGGTGGACAGACGAATGTCAACTGTTGGAGCACGTGCGTACCAGTCATAGAGATGGGATGTTTGTTTGCCGGTTTTGCAACAAGCAGGAACGGCTCAAGAAATGTCTCAATCGACACCTTCGCACAGCCCACGGGCAAGAGGTGAATCCGTATTACTGTGGGCATTGCCGGAATGCGGAGGCAACGCATAGCTACGACAGCTATGTAGCGTTGATGAACCATTTGCAGGAGCAACATTTCGCGGAAGATGATACCACTACTGCAGCGAAAGAATTGCATGGCACACTGCTAAATGCATCCCTGTTTGGCAAAGAGCTGGAATTGCTCGAGGACGACAAGGTAGTAGACGTTGAGCAGGATCGTTTTTTGCAGAACTTGCATCTCGTCCGGAGCGTTCCGGAGAGGCCGAAAACTTGTCAGCCGCTGGAACCGCGCATCGATCAACGGACGGTTCTGGAGGATTTTCTCGATGAAACGTTCGAGAATGATGAGATCTGGAACAAGTATATCGATAATGGAGAAGAGTATCTGATCGACGATTATGACATCTACCTCAAGGGAATGGATGAATCGGAGAAACAGGAAGAAGTGTGCATGTATCTGTGTCCACAGTGTAAGCAAGGGTTTCAGAGCCAGCGAAACCTGACGATTCATTTGGCGGAAGAGCACGACGTGTCCAGTTTGGTGTGCAATGATTGTGGAGCTAGTTTTACGCGGCATACAAGCTATCGAATCCATCGGCGCGAACATCTGAAGGAGAATGTTCGATTTCGTGAGAGCAACATACCCGAAATGGAGGAAGCACTTTCGCTAGTCCAAAGCACATCCTTGGACTATTCGGTGCAAGAGGAGGAAAGTGGTTATGTGTTTACCTGTAATCTGTGCGATCGCACCTTCCAGCGGAAGCACAACCTCGAAAAGCACAGATGTCTGTACTACGAACAACTGGAGCACTCCAACACTTCAGAGCAGCAGGGTGCAGGTGTCAATGGGACGGAATTGCAGCAATGCTCACACTGCCAGTTTCGCACGACATCAAGCCAGGAGCTGGAAACCCATCAGCAACGCATACATCAATCGGACATGGAGCCATCGGAGCCCGTCTACTGCATGCTTTGCGATCGTCGGTTCAGTTCCATATCCGGGCTGAAGTATCACTTGAAACGACACACAGGCATTAAGGCATTCGCTTGTTTGTACTGCGAGAAAACGTTTACGGCCAACTCGAACCTGAACGCGCACATTCGGAGTGTGCACAGCGCGCGAAAGGACTACCGGTGTGACGAATGCAACGAATCTTTTACCACGAAAGATCACCTGAACAAACACCAACGCTCGCGGCATCGGCAGGAgcgagcgtttgtgtgtggggagTGTGGCAAGAGCTACTTGCAACGGTCGCATCTGAACGAGCATGTTGCAGCGAGCCATCGGGAGGATCGGTACCTGTGCCATGTTTGCAATGGTTCTTACGTTACTAAAAGCTCCCTCAAACGGCACCAACAGCAGAAGCATGGTGTTATGAAAAGGGACGAAAAGTGA
Protein Sequence: MQDLEKHAKVQHCPTKQHQQQFHYCSACQKSFKTNRGLLQHNTIYHESQELHRCYICERQFLTKTNLQNHMRFHKDHVCSFCNNGWTDECQLLEHVRTSHRDGMFVCRFCNKQERLKKCLNRHLRTAHGQEVNPYYCGHCRNAEATHSYDSYVALMNHLQEQHFAEDDTTTAAKELHGTLLNASLFGKELELLEDDKVVDVEQDRFLQNLHLVRSVPERPKTCQPLEPRIDQRTVLEDFLDETFENDEIWNKYIDNGEEYLIDDYDIYLKGMDESEKQEEVCMYLCPQCKQGFQSQRNLTIHLAEEHDVSSLVCNDCGASFTRHTSYRIHRREHLKENVRFRESNIPEMEEALSLVQSTSLDYSVQEEESGYVFTCNLCDRTFQRKHNLEKHRCLYYEQLEHSNTSEQQGAGVNGTELQQCSHCQFRTTSSQELETHQQRIHQSDMEPSEPVYCMLCDRRFSSISGLKYHLKRHTGIKAFACLYCEKTFTANSNLNAHIRSVHSARKDYRCDECNESFTTKDHLNKHQRSRHRQERAFVCGECGKSYLQRSHLNEHVAASHREDRYLCHVCNGSYVTKSSLKRHQQQKHGVMKRDEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00104548;
90% Identity: iTF_00095790;
80% Identity: iTF_00093627;