Aara001016.1
Basic Information
- Insect
- Anopheles arabiensis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_016920715.1
- Location
- NC:32333075-32338351[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2 6.2e+03 -3.1 0.2 33 43 202 212 202 214 0.88 2 2 7.6e-15 6.6e-12 44.8 0.2 3 44 691 732 689 734 0.95
Sequence Information
- Coding Sequence
- ATGGAAATGGTGTCTCTGGGGCCGAAAAAGGATGGAAATCCTAATGCCGAATTCTTTACCGCGCCGGAAACACTGCAGAACTTCGAAACGGTGCGGCTGTGGTTGCAGAAACACTTCAAGAAgTTTCTTGCACCAGATCCACCGACAAAGGAATCTTTGGCCCATTTAATTATACAATTCATTCAGTATCAGGAAGCGAAGCTTGGGAAAAACTCTCAAGATCCACCAACAACGCGTTTGCCGATACGATGCTTCATGGATTTCAAACCGGGCGGTGCCCTCTGCCACATACTTTCCACTATGTACCGCTACAAGGCGGAGCAGCGCTGGCGCAAGTTCGATTTCACCGTGAACAAAAACCCGATGCGCAAGGACCCGATCGGGCAGATGGTGCTGGACATCGAGACGGCACTGATCGAGGCGGAATGCATGCGCCTGCCGATCGTGTACATCCGCCCGGAGGTGGACCGTGCGACGGCGAACAAAATCACCGACATCGTGACGAACCATCAGGGCGAAATAACGGCCGATGAGGAGGAGGCCACGCACATCATCTATCCGGTGATTGATCCGCTGCCGGAGGATTACGCGCGGCCCACGTTCCGGCGCGATAAGCACGTGATGATCCACTGGTACTACTTCCCGGAGTCGTACGACACTTGGGTGCCGAATTCGTTCGACCTGCCCGACAACATCCCGGAGAGTCCGCCGTCGCCGGCCGAGCGCTGGCGCGTGTCCGCCTCGTGGGTGATCGATCTGGACGAGTACAACGAGTGGATGTCGGAGGAGGACTACGAGGTGGACGAGGGGGGACGCAAGAAGGTGCACCCGCACCGGCTCGGCGTCGAGGATTTGATCTCGAGCGTggccggcggcggtggcggtggagccGGCTCGGAAGATAAGGTTAAGAAGACGCCCAAGGTGGTCAACTCGAAGCGCAAACGGTCGCCCTCGCCGGCTGCCGGCAAGGGTGGCAAGCGGAAGAGCTACCGTTCGCCGGCCGCTTCGTCCGCTGCCTCCTCCTTCCAGAAGAAGCCGCGCGCGGACGACGAAGAGTCGGAGGATCTCACCAAGGACATGGAGGATCCGGCGCCGGAAACGAACATTACCGAGGTGAAGCCGAACATGAGCAGCTCGGGCGCGTCGGGCCCGGCTACGCCGCAGCCCAAGCGCGACCCGGACATGATGCCGATGAAGTACGCCACCGTGACCGATCTGGACGACGAGATGGGCATGAATGCGGGCGGCGCTGGTGGCAGTGGTgcgggcggtggcggtggcagcggcggaTCCGGAGCGGGCGTGGGCGGTGGCGACGACAGCCAGGCGGGCAAGACgagcgacagcagcaacacgcaGGACTTCCCGACCGGCAGCAAGGACGATCTGGAGGACAACGTGACGGAACAGACGCACCACATCATCGTGCCGTCCTACTCGGCCTGGTTCGACTACAACTCCATCCACGTGGTGGAGAAGCGCGCCCTGCCCGAGTTCTTCAACGGGAAGAACAAGTCGAAGACGCCCGAAATTTACATGGCCTACCGGAACTTCATGATCGACACGTACCGGCTCAATCCGACCGAGTATCTGACCAGCACGGCCTGCCGCCGCAATCTGGCCGGCGACGTGTGCGCGATCATGCGCGTGCACGCGTTCCTCGAGCAGTGGGGCCTGATCAACTATCAGATCGATGCCGATTCCCGGCCGACGCCGATGGGCCCACCGCCGACCTCCCACTTCCACGTGCTGAGCGACACGCCGTCCGGGCTGCAGCCGATCAATCCGCCCAAGACGGCACAACCGTCCGCGGCGAAGAACTTGCTCGACCTGGACAAGAAGGGGGCCGTGCTGGGCGACAAGAAGGACGAGCTGGCACCGggtgcggtggcggcggcggcgggcgCCAATGGTGGTGCCGCGCCACTGATCGGCCCGGACGGCATCAAGGTGGAGCAGGGTCTCGTGCCAACGGCCGACCCGAACGGCCAGTTCGGCCTGCGGTTGGACCAGTACGCGAAGAAACCGGCCGCGATGCGCAACAAGACGGCGGCCAGCATGACGCGCGAGTGGACGGAGCAGgagacgctgctgctgctcgagggGCTGGAGATGTACAAGGACGATTGGAACAAGGTGTGCGAGCACGTCGGGTCGCGCACGCAGGACGAGTGCATCCTGCACTTTCTGCGGCTGCCGATCGAGGATCCGTACCTGGAGGATGACAACACGTTCCTCGGTCCGCTCTCGTACCAGCCGATCCCGTTCAGCAAGGCGGGCAATCCGATCATGTCGACCGTGGCGTTTTTGGCCTCGGTGGTCGACCCGCGTATCGCGGCCAGCGCGGCCAAGGCGGCGATGGAAGAGTTTGCCGCAATCAAGgATGAGGTGCCCGCTTCCATGATGGACGCACACCTGAAGAACGTGGAGAAATCGAGCTTCGGTGGCAAGTTCGATCCGAATGCGGGCCTGGCAAGCAGCGGTATTGCTGGCACGGGCGCCGAAAAGGACAAGGAGGACGAGTCGGCGGACGGCAAAACACCGGCAAGCGGTGGAGCGTCCTCGGCAACGTCCGCTGCTGCAGGCGGTTCCGGGGCAGCGGCCGCTGCGTCGACCCCTGCCACTCCGACCCCGCCAGCTGGCGACGTGGAGATGAAGGATGTTTCGAAGAAGGATGATGCCGCCGaaaaagaaaaatcttcCGATGAGACAACCACTGCTACTAAATCGCCTGATTCCGATGCTACTACAGCGACGCCAGCGGGCGATGCAAACGCCGGCAAACCGCCAGGAGCGGCCAGCGACGCCCCGACCGCCTCCCCAGACGCCCAGAAGGAAAAGGATGGCAAGGATGGTAAAGATGCTGGTACACCCGCGTCAACAGGCACGGATGGCGCGGCAAAGGAGAACGGCGGCTCCACCGATCCGAAGCTGTTCAACGAGGGCAATCTGcaggcggcagcagcggctgccCTTGCCGCTGCCGCAGTGAAGGCGAAGCATCTGGCCGCGGTCGAGGAGCGCAAGATCAAGAGCTTGGTAGCGCTGCTCGTCGAGACGCAGATGAAAAAGCTCGAGATAAAGTTGCGCCACTTCGAGGAGCTGGAGACGACGATGGAGCGCGAACGGGAGGGGCTGGAGTatcagcggcagcagctgaTACAGGAGCGCCAGCAGTTCCACCTGGAGCAGCTGAAGGCGGCCGAGTTCCGGGCGCGCCAGCAAGCCCACCAGCGCTTCCAGATGGAGCAGGgccaatggcagcagcagcaggcacaaGCGCAAGCGCAGGCACAGGCCCAAGCGCAGGCACAGGCGCaagcacagcaacagcagcagcagcaacagcagccaccaCAGGCCCGGCGGGGCCAGCTTCGGCCGCCTCCACCGTACCGGCGACCCACTCGAATGTGCATccgtcgcagcagcagcagccaccgcaTCTGGCCGGCGCCACCACCAATCCGGGAGCTAATCCGCCAAAGCCGCCATCTACCGCTGGTGGCCCGGGGATGGGCCCGGGAGCGCCTGGACCAGTTCATGCAACCAACAACCCGGTTcaggcggcagcagcagcagcaacagcggcacCATCAGCACTGCCGGCGACAGCATCCTTACCACCATCGGCCAGCCAAGCACCGCCGGCCGGCATGCCAGCGTCCAACGGTATCCCCCCTCCTACTTCATCCACCCCCAGCTCTACCCAGCCGCCCTCTACGAATCCTACCGACGGCATTACGCCAAATAGTATAA
- Protein Sequence
- MEMVSLGPKKDGNPNAEFFTAPETLQNFETVRLWLQKHFKKFLAPDPPTKESLAHLIIQFIQYQEAKLGKNSQDPPTTRLPIRCFMDFKPGGALCHILSTMYRYKAEQRWRKFDFTVNKNPMRKDPIGQMVLDIETALIEAECMRLPIVYIRPEVDRATANKITDIVTNHQGEITADEEEATHIIYPVIDPLPEDYARPTFRRDKHVMIHWYYFPESYDTWVPNSFDLPDNIPESPPSPAERWRVSASWVIDLDEYNEWMSEEDYEVDEGGRKKVHPHRLGVEDLISSVAGGGGGGAGSEDKVKKTPKVVNSKRKRSPSPAAGKGGKRKSYRSPAASSAASSFQKKPRADDEESEDLTKDMEDPAPETNITEVKPNMSSSGASGPATPQPKRDPDMMPMKYATVTDLDDEMGMNAGGAGGSGAGGGGGSGGSGAGVGGGDDSQAGKTSDSSNTQDFPTGSKDDLEDNVTEQTHHIIVPSYSAWFDYNSIHVVEKRALPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADSRPTPMGPPPTSHFHVLSDTPSGLQPINPPKTAQPSAAKNLLDLDKKGAVLGDKKDELAPGAVAAAAGANGGAAPLIGPDGIKVEQGLVPTADPNGQFGLRLDQYAKKPAAMRNKTAASMTREWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDNTFLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPRIAASAAKAAMEEFAAIKDEVPASMMDAHLKNVEKSSFGGKFDPNAGLASSGIAGTGAEKDKEDESADGKTPASGGASSATSAAAGGSGAAAAASTPATPTPPAGDVEMKDVSKKDDAAEKEKSSDETTTATKSPDSDATTATPAGDANAGKPPGAASDAPTASPDAQKEKDGKDGKDAGTPASTGTDGAAKENGGSTDPKLFNEGNLQAAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRFQMEQGQWQQQQAQAQAQAQAQAQAQAQAQQQQQQQQQPPQARRGQLRPPPPYRRPTRMCIRRSSSSHRIWPAPPPIRELIRQSRHLPLVARGWARERLDQFMQPTTRFRRQQQQQQRHHQHCRRQHPYHHRPAKHRRPACQRPTVSPLLLHPPPALPSRPLRILPTALRQIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00098945; iTF_00109067; iTF_00096311; iTF_00105770; iTF_00107628; iTF_00100245; iTF_00103612; iTF_00105078; iTF_00108319; iTF_00102304; iTF_00106930;
- 90% Identity
- iTF_00102304;
- 80% Identity
- -