Basic Information

Insect: Anopheles aquasalis
Gene Symbol: -
Assembly: GCA_002846955.1
Location: NJHH01001651.1:48183-51422[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0002 0.013 15.5 1.9 1 21 43 63 43 64 0.95

2 17 0.054 3.4 7.8 0.3 2 19 97 113 96 115 0.91

3 17 9e-06 0.00057 19.7 6.2 1 23 507 529 507 529 0.98

4 17 3.2e-07 2e-05 24.3 0.5 1 23 535 557 535 557 0.99

5 17 2.5e-06 0.00016 21.4 0.2 1 23 563 585 563 585 0.98

6 17 3.1e-05 0.0019 18.0 0.6 2 23 591 612 590 612 0.96

7 17 3e-06 0.00019 21.2 5.0 1 23 618 640 618 640 0.99

8 17 0.00019 0.012 15.6 2.2 1 23 724 746 724 746 0.97

9 17 4.9e-06 0.00031 20.5 2.5 2 23 753 774 752 774 0.98

10 17 1.5e-06 9.6e-05 22.1 0.8 1 23 780 802 780 802 0.98

11 17 1.9e-06 0.00012 21.8 0.1 2 23 808 829 807 829 0.98

12 17 4.2e-07 2.6e-05 23.9 2.1 1 23 835 857 835 857 0.99

13 17 3.1e-06 0.00019 21.2 2.2 1 23 916 938 916 938 0.99

14 17 6.4e-07 4e-05 23.3 2.4 1 23 944 966 944 966 0.99

15 17 3.8e-05 0.0024 17.7 0.3 1 23 972 994 972 994 0.98

16 17 2.7e-06 0.00017 21.3 0.3 2 23 1000 1021 999 1021 0.98

17 17 4.3e-06 0.00027 20.7 1.0 1 23 1027 1049 1027 1049 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0002	0.013	15.5	1.9	1	21	43	63	43	64	0.95
2	17	0.054	3.4	7.8	0.3	2	19	97	113	96	115	0.91
3	17	9e-06	0.00057	19.7	6.2	1	23	507	529	507	529	0.98
4	17	3.2e-07	2e-05	24.3	0.5	1	23	535	557	535	557	0.99
5	17	2.5e-06	0.00016	21.4	0.2	1	23	563	585	563	585	0.98
6	17	3.1e-05	0.0019	18.0	0.6	2	23	591	612	590	612	0.96
7	17	3e-06	0.00019	21.2	5.0	1	23	618	640	618	640	0.99
8	17	0.00019	0.012	15.6	2.2	1	23	724	746	724	746	0.97
9	17	4.9e-06	0.00031	20.5	2.5	2	23	753	774	752	774	0.98
10	17	1.5e-06	9.6e-05	22.1	0.8	1	23	780	802	780	802	0.98
11	17	1.9e-06	0.00012	21.8	0.1	2	23	808	829	807	829	0.98
12	17	4.2e-07	2.6e-05	23.9	2.1	1	23	835	857	835	857	0.99
13	17	3.1e-06	0.00019	21.2	2.2	1	23	916	938	916	938	0.99
14	17	6.4e-07	4e-05	23.3	2.4	1	23	944	966	944	966	0.99
15	17	3.8e-05	0.0024	17.7	0.3	1	23	972	994	972	994	0.98
16	17	2.7e-06	0.00017	21.3	0.3	2	23	1000	1021	999	1021	0.98
17	17	4.3e-06	0.00027	20.7	1.0	1	23	1027	1049	1027	1049	0.98

Sequence Information

Coding Sequence: atgcaacagcagcaacagcagcaacaactaaCCCAAGTTCAGACACCAATCCAGCAGCAATCGTGCAGATGCGAGTTCTGCGAGTATCTTCAGGCCAACCGTATCTCCCTCACCGGGGATCACTCCTTTCAGTGTGAGTTTTGTGGGGAAGgtttttccaaccaaaacAGCTACAATCGGCACCGGTGCGGTAGCACCGACATACAGGTGTACCGTTGTGAAAGCTGTCGCCATGAGTACGGTACCTCGCGGACAATGCCCACGATCAACAGCGGTGAACCTCGTGACAAATGTGATATCTGCAATCGGAATTTCGATCATTCGATGCTAGAGGATCATGGGAGCTGTGGACCGGTACCTCCACCCCTGCAAgccccgccaccaccgccacccatcAGCAACTCATTAGCATCAATTGAACCAGTGCCAACGATGGGTGCAGTAGCTGTACCTCCTCCCATTGGGACCGCCAACAGTAGTGGCGTTGGGAATGGTAACACCAACAACCTTCCCGCTAGCAAATCATACAACGTACCGATCCTTTTGGCATCGGTTTCCTCCACATCACCAGCGGGAACGCTTCGAGATACATCCAATGGGGGAACCAGCGATctcagtgctgctgctagtgtcCGTTCGATTGCCGACAGTCCGATGGAGCACGATATCGGTACGCTGGATCCGTTCGGATCGGACAGTGAGTGCATTAGTGAATACCTTGGCCACGAATCCATGTCATCCGGTGCGTACGCCACGACGTATTGCACTGGCAGAAAGATGGAATGCTCGTTGAGCGAATCTTCCGGCACCAATCCGGGCTCTTTACTACCGGAATCGGCCAAAACTTACTTCGTGCTCGGTAATGTCGAGCTCCAGCAAGCGGTTCAACCGACGACTAACAACAACTCCGACATACCAGCGACACCAGTGTCCCAGCACAGCATtagtgccaccaccggttacCACCATCGGCACATGGCACtacagcagcaaacagttccTCCACcacttcaccatcatcaccagcaaccacctcCCTTGTCTTTGCCTAATCTGCTGCATCACTTGGCACCCAAAGAGTACGAGGTAACGAGCCTCCAGCAGTACGATGATCAGCactacgacgatgaagacTACTCCACCATGTCCGAAGATGAAGCTATTGTTCCAACAGAACCTTATGCGAAATCACCCAATCAGGACCACGCCAAAACGGAACTCCCAATACAGGATACGATCGTGGACACGAGCACCAAGACGTTGCTGCCCCCTCCGGTCACTACCGGTCATCTGGGAGGCACGACAAATCACTACACAATGCAAGAGCTAAagccaccgatggccatgGGTGCGCTAGGACCGATTGGACCACCGGCGCGCTGTGTtgacgaggaggagggaggCAAATGTGACTCATCGTCCTCACTCAGGCCAGTGGGAGGTCTGGCGCAAAAATCCAACGTCGCAGGGGGTTTCCAGGAAGGGGGCGCTTCCCGCGTTGGATCGACCGATCGTCCGCACAAGTGTCATATCTGTGAGCGTTCGTATCGGAATCAGAAGAACCTCAAGTCACACCTGAAGGTGCACGAGGGCATACGGGCGTATCAGTGTGAAATATGTGGAAAGAATTTTTCCGGTTCCAGCTACCTGGTCATTCACCGGAGGCGCCACACCGGCGAACGGCCCTTCAAGTGTTCCACCTGTGGCAAAGCGTTCGTCGATTCGCGGGCCCTCGCCGTCCACACGCGGCTACACAGTGGCGAACGGTTAAAGTGCGAAAAGTGCGAAAAGACGTTCTCCAGCGTCAGTGCACTCACCGTCCACAACCGGCTGCACACGGGCATTCATCCTTACAAATGCGAACTGTGCAGCAAAACGTTCCCGCAGTACAATAACTTGAAGCACCATATGAAGAAGCACGACCAGCCGGGGCCGACCGAGAAAAAGGCGTCCTCAAATGGCCTGTGTGGAACGAGCAATAGTagtaacaccaccaccaccaccaccaccagcagcagcagcaactactcATCGGTGTCCAGTAGTGCAGTGGAAATTGGACAGATGCACGATCCTGTGGCTGCGTTGTCCAGTGTTGCTACAGTTGCACCCGTACCACAGCCTACTCAAGCGATGGTACCCAGctcgaccaccagcaacatgtTTGACTTCAAATGCCACATCTGTAGTAAGCTGTACAAATCATCTGCCGAGCTGCAAGACCATCTTAGTCAGCACAGCAAAGAGCGACCGAATCAGTGTGAATTCTGCTCGAAGGTATTCCCACGGTCCTCGCATCTGATCATCCACCGGCGGCGTCACACCGGTGAGCGACCGTTCAAGTGCAAATACTGTGACAAAGCGTTCGTCGATTCGCGGGCCCTCTCGGTGCACACGCGACTCCACACCGGGGAGCGCGTAAAGTGCGAAATTTGTGAGAAAACATTTGCCAGCTCCAGTGGACTGATCGTCCATCGACGCATTCACACCGGCATCCATCCGTACAAGTGTGACTATTGTGACAAATCGTTCGCCCAATCCACAGCCCTCAAGTATCATCTGAAGAAGCACGATACTTCCTCTTTGCCAACGACCACTAGCGTTGCCGCTGGCGTGGTTGCTACGGTTGCTAcgggtgatgctgctggtactgccaCAAGCAGTGCCTCTATCGGAAGCTCATCCAATCAGCAGACGATACCGGTCAGcaacggtgctggtgaggCAACCGGTGGTAACGATCGGTACAAATGTCTCACGTGTGGGAAGCTGTTCCGTTCCTCGGAATACCTGGTGCGCCATCGGCGTACACACAGCGGAGAGCGTCCGTATCAGTGCGAGATCTGcgggaaacacttttccaccatGAGCTATCTAGTTATCCACCGGCGTCGCCATACCTCGGAGCGACCGTACAAATGCACCTCTTGTGAGAAAGCGTTCGTGGATTCGCGCGCACTCCAGGAACACGCCCGGCTCCATACCGGCGATCGTGTCAAGTGTGAAATATGCCAAAAAACCTACTCCAGCGTGAGCAATTTGATCGTGCACCGGCGCATCCACAGCGGGATACATCCGTTCGAGTGTGGTAGCTGCGGTAAATCGTTCGCCCAAAAGAACGCCCTCAAGTATCACttgaaaaaacacaacaaaccagcGGAGCCGACGCCGAAAAACGAATag
Protein Sequence: MQQQQQQQQLTQVQTPIQQQSCRCEFCEYLQANRISLTGDHSFQCEFCGEGFSNQNSYNRHRCGSTDIQVYRCESCRHEYGTSRTMPTINSGEPRDKCDICNRNFDHSMLEDHGSCGPVPPPLQAPPPPPPISNSLASIEPVPTMGAVAVPPPIGTANSSGVGNGNTNNLPASKSYNVPILLASVSSTSPAGTLRDTSNGGTSDLSAAASVRSIADSPMEHDIGTLDPFGSDSECISEYLGHESMSSGAYATTYCTGRKMECSLSESSGTNPGSLLPESAKTYFVLGNVELQQAVQPTTNNNSDIPATPVSQHSISATTGYHHRHMALQQQTVPPPLHHHHQQPPPLSLPNLLHHLAPKEYEVTSLQQYDDQHYDDEDYSTMSEDEAIVPTEPYAKSPNQDHAKTELPIQDTIVDTSTKTLLPPPVTTGHLGGTTNHYTMQELKPPMAMGALGPIGPPARCVDEEEGGKCDSSSSLRPVGGLAQKSNVAGGFQEGGASRVGSTDRPHKCHICERSYRNQKNLKSHLKVHEGIRAYQCEICGKNFSGSSYLVIHRRRHTGERPFKCSTCGKAFVDSRALAVHTRLHSGERLKCEKCEKTFSSVSALTVHNRLHTGIHPYKCELCSKTFPQYNNLKHHMKKHDQPGPTEKKASSNGLCGTSNSSNTTTTTTTSSSSNYSSVSSSAVEIGQMHDPVAALSSVATVAPVPQPTQAMVPSSTTSNMFDFKCHICSKLYKSSAELQDHLSQHSKERPNQCEFCSKVFPRSSHLIIHRRRHTGERPFKCKYCDKAFVDSRALSVHTRLHTGERVKCEICEKTFASSSGLIVHRRIHTGIHPYKCDYCDKSFAQSTALKYHLKKHDTSSLPTTTSVAAGVVATVATGDAAGTATSSASIGSSSNQQTIPVSNGAGEATGGNDRYKCLTCGKLFRSSEYLVRHRRTHSGERPYQCEICGKHFSTMSYLVIHRRRHTSERPYKCTSCEKAFVDSRALQEHARLHTGDRVKCEICQKTYSSVSNLIVHRRIHSGIHPFECGSCGKSFAQKNALKYHLKKHNKPAEPTPKNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00098509;
90% Identity: -
80% Identity: -