Basic Information

Insect: Anopheles albimanus
Gene Symbol: -
Assembly: GCA_013758885.1
Location: NC:48926957-48931028[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.95 45 4.1 0.1 5 23 137 156 136 156 0.91

2 16 0.00049 0.023 14.5 2.7 3 23 198 218 196 218 0.95

3 16 1.7e-06 8.2e-05 22.2 1.2 1 23 266 288 266 288 0.97

4 16 0.0081 0.38 10.7 0.3 1 23 294 317 294 317 0.95

5 16 0.25 12 6.0 3.9 2 23 331 353 330 353 0.95

6 16 0.039 1.9 8.5 0.2 1 23 429 452 429 452 0.92

7 16 0.00017 0.008 15.9 0.1 2 23 482 504 481 504 0.95

8 16 2 95 3.1 4.6 1 23 515 538 515 538 0.96

9 16 9.2e-06 0.00044 19.9 2.6 1 23 659 681 659 681 0.97

10 16 0.18 8.6 6.4 0.7 1 23 687 710 687 710 0.84

11 16 0.019 0.88 9.5 0.2 2 23 722 744 721 744 0.94

12 16 7 3.3e+02 1.4 1.3 3 23 773 794 771 794 0.94

13 16 0.11 5 7.1 0.9 2 23 814 835 813 835 0.94

14 16 5e-06 0.00024 20.7 4.8 1 23 859 881 859 881 0.98

15 16 0.009 0.42 10.5 0.4 1 23 887 910 887 910 0.93

16 16 0.0011 0.05 13.4 1.5 2 23 924 946 923 946 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.95	45	4.1	0.1	5	23	137	156	136	156	0.91
2	16	0.00049	0.023	14.5	2.7	3	23	198	218	196	218	0.95
3	16	1.7e-06	8.2e-05	22.2	1.2	1	23	266	288	266	288	0.97
4	16	0.0081	0.38	10.7	0.3	1	23	294	317	294	317	0.95
5	16	0.25	12	6.0	3.9	2	23	331	353	330	353	0.95
6	16	0.039	1.9	8.5	0.2	1	23	429	452	429	452	0.92
7	16	0.00017	0.008	15.9	0.1	2	23	482	504	481	504	0.95
8	16	2	95	3.1	4.6	1	23	515	538	515	538	0.96
9	16	9.2e-06	0.00044	19.9	2.6	1	23	659	681	659	681	0.97
10	16	0.18	8.6	6.4	0.7	1	23	687	710	687	710	0.84
11	16	0.019	0.88	9.5	0.2	2	23	722	744	721	744	0.94
12	16	7	3.3e+02	1.4	1.3	3	23	773	794	771	794	0.94
13	16	0.11	5	7.1	0.9	2	23	814	835	813	835	0.94
14	16	5e-06	0.00024	20.7	4.8	1	23	859	881	859	881	0.98
15	16	0.009	0.42	10.5	0.4	1	23	887	910	887	910	0.93
16	16	0.0011	0.05	13.4	1.5	2	23	924	946	923	946	0.96

Sequence Information

Coding Sequence: ATGGAAGGGGTCGCTTGTGAAAGTGTGATGGATCCCGAGGAGGAACCGGTTGTCAACGATAATCCAACGGTGGTACCGAACGAGTACCCGGAAACCTATTGTCGCTTCTGTTTCTCTGAAATCGACGTCCAGCCTCTGTTTTCCTCCGAATGTAATACGATGTCGAGTATGCTAGACCGCTTGTTCGAGTGCATAGGATTGCGCCTGACGAAGGACGTCGATTATCCAAGTAGCATATGCTTGATGTGTTCCTTGGCGATGCAAGAGTTCCAATGCTTTCGGGATCGATGTTTGAAATATGATGAAATCTTCCGCCGTTGCCGGAAGCTGAACGAAAAACAGCAACTGGATGTGGTTGAGCCACGTCAGAAAGCAGCAGAGCCCTTGTCTTTGGATGGCGAATCGAGTTTATGCCAGCAGCAATTTCCAGACAAAGTGGACCTCGACCAGCACCTGGAACAGAAACACAAAGAACGGAAAAGACAGCCATTCCTGAATGGTGTAGCACCGGTCGTAGAAGCTTCTGTGGCACCGATGGTACCGTCAGTGAACGGAACCCAAGAACCAGTACCCAAACCACGCAACATCTGTTGTGCATACTGTCCTCGAAAATTCACTCGTCAAATGTATTACGAGCAGCATTTACAGAAGCACACCAAACAGAAAGTACAGCGAGAACGATCGTTCCGGTGTTCGTGCTGTCCTCGGTCCTTCGAGTCGCTGCCCCGGCTAAAGTTccacgaaaagaaagaacacGGTAAAAAGACGAGCaagaaaacgaacgaaggaacatCATTCGTTTGTCCAGAGTGTTCTAAATCCTTCAAATATCGTTATTCGCTGCGCATGCATATCCTCAACCATCGTGGCCAgttgccgtttgtttgtgaaataTGTGACAGTGGTTTCTACAACGTCAATTATCTGACCGCACACAAGGCTCGCTATCATGGTCCGAATGCTGTGGCCGTTGTGCGCGGTGAGAAGATCTCTTGCCGATATTGTCCTCGCAGTTTCCTACGGAAATGTGATCGGACGAGTCACATGAAGCAAATGCACCCGAACATTCCACTGGAGGAAGATCCCGATGAAAATCATGCACCGGAAATACTCGAAGAGTGTCCACCGGCAGACAGCGATGGAATAACAGATCCGGAACATCTACTACCTAACGTGCACgagccggtgatggtgattaaAGAGGAGCAGATAGAGGAGGTGGAGCATGAGGTAGAAGGCACAGTTCCGGTCCGGGAAACGAAGGCTGATGCCAAGGGCGCAAATTTCTATTGTAAAATCTGTGCGATGGAGTTCGATACGGAGGACATGTATTCGGAACACATGGACGATCAGCATTCCCTCGGAGGGGCTGAGTCTACTGATCAGACTGAAGGACACCGTAGCGAAAATGGGATAGGGTTCCGTAGTAGAAAGAGAATTATCTACTGTCAGTATTGCCCAGCAATATTTAGCCGTCCCGGTTACTTGAACGCACATACGCTGCGGAAGCATCCCGACAAGTATGAAACGTCTATGGGTTCGTACAAGTGTCGCTTCTGCCCACGACAGTTCCATGAGCTACGATATCGAAAGGTACACGAGCGAATGACACACGCGAGGCGAGGTGAGGTATTGCCAGAGATGAACGATTTTttcagcaaaacaacacacagtGTCAGTACCGCGGCATTAGAGGCATCGTCAGAACTTTCGAACGATGGAACGAGCACAATGAGCGATCTTTCTCTTCTGGGATGCTCATCACTGGTTATCCGGTTAGAACCTCTACCACCGAAGGTGCTGGCCACTTACCAATGGCAGCTGGATGAATACGAtaggagagaggaagaacgGGATGTCAAGCCCCTAACTCTGACCACGCCAGCAATCGATGGTACGTGTAGCTCCCCTGCCGGCAGTAGTGAGACCAGCGATAGGGTCGATTCAGTGCGCACCAAGCTCGGCATCAAGTTGCACCCTTGCGGGAAATGtgagaaaatgtttaaaactcGCCAGGCACTTCAAAAACATATGATGTATCACATTGGTCAACTTCCATATCGGTGTGACGAGTGTGGCGTACAGTTTATGCGGATAGGGCAGCTCTCCTTTCATAAATCGCGCTATCATGGCGATAGCGCGCCGACCATTGTTAACCGGGTTAGCTGTGATTACTGCCCGCGTATATTTCTACGCAAGCAGGATCTGGCCAGCCATTACTTCATGGTACATGGTAAAGATCGTGCTCAGCAACCCTACCGGACTGATGATCCTTCGCCGGAGCAGCgtaaaaaatcgaaacgaaaggagTACTGGTGCCAAGGGTGCGGCAGTTTGTTCGATCGCTATCGTAAGTGCGAGCGACACATCGCGAAAGAACACGGCATGGATGCTGCGGACGGAGATACTGGAGCGACGATAAAGCCAATCAAGCTTTGCCGCTGCAGCGTGTGTGCGACGATCTTCAAAAAGCGTGACGAATGGCTTGATCATCTGTCGGGTCACGCGAATGTCCGGCCACACAACTGCGAGCAGTGCTTGAAGGGGCGTAAGAAGTTTGGTCGCAAACAGGTACACAAGTGCACCTACTGCCCAAAGGTCTTCATTCACAGTACAACACTAAAGTCGCACCTTCGAATCCACACCCAACAGCTTCGCTTCCCGTGCAACGAGTGTGGCGTCATGTACGATCGGTACCGCTATTTGGCCATGCATAAAGTACGCTACCATTCCGAGGACTCATCGGCGGTCTCGCAGTCACAGCTTCTTAAGTGTGCATTCTGTCCCCGTATGTTCACTCGACTGCGGGACGTTAATCACCATCAGATGTCGGTACACTCCGACGGGATGACCGTGGACACGCCCGAGCAGCCTGACGGAGTGGAGCAAGAACAACCTACATCGCAGCTACTGCCGCATGAGTTCGGCAGTCTTTCTGAGCTGCTGCTTAGTAGCAATTGTAACGATCTTACAaacgtcaccaccatcaagcAGGAATTTCCATCCAGTTTGGAGCAGTGA
Protein Sequence: MEGVACESVMDPEEEPVVNDNPTVVPNEYPETYCRFCFSEIDVQPLFSSECNTMSSMLDRLFECIGLRLTKDVDYPSSICLMCSLAMQEFQCFRDRCLKYDEIFRRCRKLNEKQQLDVVEPRQKAAEPLSLDGESSLCQQQFPDKVDLDQHLEQKHKERKRQPFLNGVAPVVEASVAPMVPSVNGTQEPVPKPRNICCAYCPRKFTRQMYYEQHLQKHTKQKVQRERSFRCSCCPRSFESLPRLKFHEKKEHGKKTSKKTNEGTSFVCPECSKSFKYRYSLRMHILNHRGQLPFVCEICDSGFYNVNYLTAHKARYHGPNAVAVVRGEKISCRYCPRSFLRKCDRTSHMKQMHPNIPLEEDPDENHAPEILEECPPADSDGITDPEHLLPNVHEPVMVIKEEQIEEVEHEVEGTVPVRETKADAKGANFYCKICAMEFDTEDMYSEHMDDQHSLGGAESTDQTEGHRSENGIGFRSRKRIIYCQYCPAIFSRPGYLNAHTLRKHPDKYETSMGSYKCRFCPRQFHELRYRKVHERMTHARRGEVLPEMNDFFSKTTHSVSTAALEASSELSNDGTSTMSDLSLLGCSSLVIRLEPLPPKVLATYQWQLDEYDRREEERDVKPLTLTTPAIDGTCSSPAGSSETSDRVDSVRTKLGIKLHPCGKCEKMFKTRQALQKHMMYHIGQLPYRCDECGVQFMRIGQLSFHKSRYHGDSAPTIVNRVSCDYCPRIFLRKQDLASHYFMVHGKDRAQQPYRTDDPSPEQRKKSKRKEYWCQGCGSLFDRYRKCERHIAKEHGMDAADGDTGATIKPIKLCRCSVCATIFKKRDEWLDHLSGHANVRPHNCEQCLKGRKKFGRKQVHKCTYCPKVFIHSTTLKSHLRIHTQQLRFPCNECGVMYDRYRYLAMHKVRYHSEDSSAVSQSQLLKCAFCPRMFTRLRDVNHHQMSVHSDGMTVDTPEQPDGVEQEQPTSQLLPHEFGSLSELLLSSNCNDLTNVTTIKQEFPSSLEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00098562;
90% Identity: -
80% Identity: -