Basic Information

Insect: Anopheles albimanus
Gene Symbol: prg
Assembly: GCA_013758885.1
Location: NC:65288080-65290656[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.23 11 6.1 0.5 1 19 236 254 236 259 0.75

2 10 0.032 1.5 8.8 0.3 1 23 265 288 265 288 0.96

3 10 2.3e-06 0.00011 21.8 0.6 1 23 294 316 294 316 0.96

4 10 2.6e-09 1.2e-07 31.1 1.6 1 23 322 344 322 344 0.98

5 10 1.2e-05 0.00055 19.6 1.2 1 23 350 372 350 372 0.97

6 10 0.00062 0.029 14.2 0.1 1 19 379 397 379 399 0.96

7 10 4.9e-05 0.0023 17.6 1.1 1 23 506 528 506 528 0.98

8 10 5e-05 0.0024 17.6 0.8 1 23 536 558 536 558 0.99

9 10 0.0035 0.16 11.8 1.1 1 23 564 586 564 586 0.96

10 10 0.0014 0.069 13.0 0.1 3 21 594 612 592 613 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.23	11	6.1	0.5	1	19	236	254	236	259	0.75
2	10	0.032	1.5	8.8	0.3	1	23	265	288	265	288	0.96
3	10	2.3e-06	0.00011	21.8	0.6	1	23	294	316	294	316	0.96
4	10	2.6e-09	1.2e-07	31.1	1.6	1	23	322	344	322	344	0.98
5	10	1.2e-05	0.00055	19.6	1.2	1	23	350	372	350	372	0.97
6	10	0.00062	0.029	14.2	0.1	1	19	379	397	379	399	0.96
7	10	4.9e-05	0.0023	17.6	1.1	1	23	506	528	506	528	0.98
8	10	5e-05	0.0024	17.6	0.8	1	23	536	558	536	558	0.99
9	10	0.0035	0.16	11.8	1.1	1	23	564	586	564	586	0.96
10	10	0.0014	0.069	13.0	0.1	3	21	594	612	592	613	0.95

Sequence Information

Coding Sequence: ATGCAGCAGTGTCGGTTATGTTTGGGCCAGGACAGGGAGCTCGTGGACATCTTCATTACACAGCGGCAGGAAGTGGAGAACGCGGCGGCCCCGCTCCACGTGCGGCTTCAGGAGTGTCTGCATCTCGATATACTCCAGAACGATAACCTACCCCGGTGGATCTGCCGGCAGTGCTTGGACCGTGTGGACGATTTTACCCGCTTCCGGGAGCGTTGTTTGGAGAATGAACGGGCACTACGGGAGGCCAACACACAGCAGACTCTGGGTGATTCCCAGAAACCCCGCGAAAATGTGAACTCGATTTATGACCTGGACACGagcgacgatgaggatgacgatgacgaaccgGAGATAGTGGTAGTGAATCCGATGCGCGATTACGAAAGCTCCAACCAGAGCCTACAGAATGGAATGTGCGATGATGCGGGAGACGAGGAGCCACCGGAAGAGAATGATGATCTGTTTCAACCGGCCACGAATGATGCACAACACCCCAGTGCTGCTGAAACGATGAATACGTCCGCTGCAGATGCCCACGCGGAAGAGGAACTCGATGGTTCGGgagatgcagaagaagaagacgatgaagaagatgaaatgaTATCGGTGTATCCGGCTGGCACGGCTAGCAATGGTTTGGAACGACCAACGGAAGGCCAAAGCCGGAACGATCGTGCTCATGAGGCCGTGCAGAAGACGACCGTGTTCACCTGCAAATACTGTGACGTGGCTTTCGCGGCTTCGGCAGCCTGTCAACTGCACGAGATGCAGGATCACGATCTGTTGGCACCGTACGCCTGCCATCTGTGCAACTACCGTACGGCCATCCGGCTATCGCTGATTGCGCATCTTCGCGAGATTCACAGTATTCCGCGTCCGTACATCTGCGTCCAATGCGGTAAAGGCTTCGTGCGCCGATCGGATCTGAAGAAGCATACGTTCGTACATACCGGTGTCCGGCCGTACGCTTGCCAACAGTGTGGCAAGTCCTTCTCGCGCAACACTAACCTCACGAAGCACATGCGCATTCACCTTGGCGTGAAGCCACACAGCTGCAACTCCTGTCCCCGGACGTTCGTGAACAAAGCGGATCTGGTACGGCACCGCAATGTGCATCTTTCGACCCGAACAGCCTTCACCTGCGCCTGGTGTGGTAATGCGTACGCCCGGAAGGACAATCTGCAGCACCATGAGGTTAACTGCTCCTCTAGGAGGCATGCGACCAGTGCGCCACCTTTGCTACCACCGCAGGTCAACGAGAATCATCTGTTCGCGTACGGTGGGCTGAACTCAGATCCATCGATCGGTCAGATGGCATCAGGACCGCCGCAGCACAGCGCGgaaccgacgaccacgatggaCCGATCGAAAGGAATGGACTCGACCTTGAATGCAAGTGCAACGTTGGCCAGCTTCGCCAACATCATTCCCATGCAGATGATGGGTGAATCGGCCACTGGGgtcggtgtgcccggtgcaCGTACTGGTGCCGAAATGCCACCCTCGAACAAGGTGTACGATTGTCCAAGCTGCCCCAAGCGGTTCCTCAGCAAGGCGACACTCCGGAAGCACCAGCAGACGCACCCGCAGCGTCCCGATCCGGGCTACGAGTGTCCACAGTGCCAGAAGCATCTGCCTGGTAAGCGTGAACTCGAACGGCACCTAATGACGCATCTCGACCATAAACCATTCGCTTGCAAAACGTGCGGCAAACGGTTCCTGTGGAAGGACAAATTGCAACGCCACGAGCGCATCCATCGCGAGACACGCCATTTCGGTTGTCCGAACTGTGGCGCGACGTTCCAGCGTAGGACGGCACTGGCGACGCACCTCAAAATCGATTGTACCGCCTCACTGATCGGTCGGGAGCAACGGCTCACGAACGATGCGCCCTACCTACTGCCACCACATTCCATGCTTCCGTGA
Protein Sequence: MQQCRLCLGQDRELVDIFITQRQEVENAAAPLHVRLQECLHLDILQNDNLPRWICRQCLDRVDDFTRFRERCLENERALREANTQQTLGDSQKPRENVNSIYDLDTSDDEDDDDEPEIVVVNPMRDYESSNQSLQNGMCDDAGDEEPPEENDDLFQPATNDAQHPSAAETMNTSAADAHAEEELDGSGDAEEEDDEEDEMISVYPAGTASNGLERPTEGQSRNDRAHEAVQKTTVFTCKYCDVAFAASAACQLHEMQDHDLLAPYACHLCNYRTAIRLSLIAHLREIHSIPRPYICVQCGKGFVRRSDLKKHTFVHTGVRPYACQQCGKSFSRNTNLTKHMRIHLGVKPHSCNSCPRTFVNKADLVRHRNVHLSTRTAFTCAWCGNAYARKDNLQHHEVNCSSRRHATSAPPLLPPQVNENHLFAYGGLNSDPSIGQMASGPPQHSAEPTTTMDRSKGMDSTLNASATLASFANIIPMQMMGESATGVGVPGARTGAEMPPSNKVYDCPSCPKRFLSKATLRKHQQTHPQRPDPGYECPQCQKHLPGKRELERHLMTHLDHKPFACKTCGKRFLWKDKLQRHERIHRETRHFGCPNCGATFQRRTALATHLKIDCTASLIGREQRLTNDAPYLLPPHSMLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00092956;
90% Identity: -
80% Identity: -