Basic Information

Insect: Anopheles albimanus
Gene Symbol: -
Assembly: GCA_013758885.1
Location: NC:2763810-2768076[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.33 16 5.6 3.5 3 23 345 366 344 366 0.96

2 11 2.5e-06 0.00012 21.7 1.9 1 23 371 393 371 393 0.98

3 11 0.00012 0.0059 16.4 2.2 1 23 399 421 399 421 0.98

4 11 5.2e-05 0.0025 17.5 2.8 1 23 427 449 427 449 0.98

5 11 2.4e-05 0.0011 18.6 1.3 1 23 455 477 455 477 0.97

6 11 1e-08 4.7e-07 29.3 0.9 1 23 483 505 483 505 0.99

7 11 1.6e-07 7.8e-06 25.4 0.1 1 23 511 533 511 533 0.99

8 11 0.00016 0.0075 16.0 0.0 3 23 544 564 542 564 0.97

9 11 0.0016 0.074 12.9 3.1 3 23 572 592 570 592 0.98

10 11 4.7e-05 0.0022 17.7 1.4 1 23 598 620 598 620 0.93

11 11 9.2e-05 0.0044 16.8 4.2 1 23 626 648 626 648 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.33	16	5.6	3.5	3	23	345	366	344	366	0.96
2	11	2.5e-06	0.00012	21.7	1.9	1	23	371	393	371	393	0.98
3	11	0.00012	0.0059	16.4	2.2	1	23	399	421	399	421	0.98
4	11	5.2e-05	0.0025	17.5	2.8	1	23	427	449	427	449	0.98
5	11	2.4e-05	0.0011	18.6	1.3	1	23	455	477	455	477	0.97
6	11	1e-08	4.7e-07	29.3	0.9	1	23	483	505	483	505	0.99
7	11	1.6e-07	7.8e-06	25.4	0.1	1	23	511	533	511	533	0.99
8	11	0.00016	0.0075	16.0	0.0	3	23	544	564	542	564	0.97
9	11	0.0016	0.074	12.9	3.1	3	23	572	592	570	592	0.98
10	11	4.7e-05	0.0022	17.7	1.4	1	23	598	620	598	620	0.93
11	11	9.2e-05	0.0044	16.8	4.2	1	23	626	648	626	648	0.99

Sequence Information

Coding Sequence: ATGGACAATTTcgccgctgttgctggcgaTGCCCCAGACTTCTTATCATGCACGCCTCCCAGCAGTTCCGATCCGAAAATCATTTACTTGGACCGCATTTGCCGGACGTGCttggaggaaaaggagaaagaccAACTAAAGGATTTGTTTGAGTACTGCCTCGCCGAGACCATCATGAGCTGCACGACCATTTCGATAACCGAATCCGACGGACTACCGTGCCACATCTGTCTCGACTGCTGCTCGCAGGTTGAGCGAAGCTGCAATTTCCGGCATATGAGCGAACAGTCCGATGCCACGATCCGATCGCTGATTGAACAATCCGTCGTCATCAAACAGGACAGCGAGACCAAGTACGAGGTGCTCAATGTGGTGCTGACCGATTCCAATGGCAACACCGAAACCTCGGCCGTCGTGGTTCCAATCGAAGAGTTTCGCTTTCAGCTGGTCAACAGCAGCGAAGTGTCGGTGGAGCAATACGGcgacaaaccgaccgacacagTATCGGTGATGGACAGTTCGGAGACTATTGCACCAGAAGAACAAATCCCGCCCACAGTGAAATCAACGTTGAAAGAATATGACGATCTCTATTCGCTCCCAGTCAATCCTAATGAGCTGTTGAACGAATTATCACAAACACCGCCTCCTGAGAGACGGGCAAAGGAAGCTGCTGTAGCGCCAGGAGAGTCCGCCACGAAGGAATCAACCATTCTGAAGAATCTCAAGAAGGAGCTGTCGGAGTTCATTGGCAGTAGCTGCACCATCGTAccgaaggaaacggaaatcgtcgacgagaacgaggatgatgaaatgattcaCGTGAACTATCTCAAAGATGCCTTAACGGAGGAATACATTCAAATAATGGAAACACAATTGGCATCCTCCGTGCCCAACGATATCCCAGGAACGGCCCAGGAACAGTTGGAGCAAGAGCACCTGAACAACCTGATTAATGCCTCGATGGAAGCCGAAGGATCGCGGCCCGTGGTGCACAGTGCTGATACTGAGGAGCAGAGCACACGGCACTGTAAGCTATGCGATGTCCATTTTGGCGAGCGAAGGTTATATCGAGCACACGTGAAAAGGATGCATTCCGAAAAACGATATGAATGTAGTAACTGCTCTCGAAAGTTTACGGATAAATCGATGCTCAACAATCACCTCTTGCGGCACACGGGGGAAAAGGCTCACGTGTGCAGCGAGTGTAATGCAAAGTTTTACGAGCGAAACATGCTGAACATGCACATGCGAACACATTCCGGTCAGCGCCCGTACGCCTGCGAGCATTGCGACAAGCGGTTCACGAAGAGAAGCATCCTAACGACGCACCTGAAAGTGCACAGGGAACCTCGGCCGCACGTGTGCACCGTCTGCCAGAAGGGATTCAAACTCTCCTGGCAGCTGaaggcacacacgcgcattcacacgaacgaaaaaccattCCAGTGTCCCCAGTGCCAGAAGCGGTTCAATCAGAACGGCAACCTTATCGTTCACATGCGCACGCATTCTGGCGAAAAACCGTACCAGTGTAAAGACTGCGATAAAGCCTTTCCCAGCAAAGGGGAACTGGCCGGTCACATGCGACAGCACACGggagagaagaagacgaaaaagaTCGCTTGTTCCCTGTGTCCGAAGCTGTTCGCCGCCAACTATGATCTCGCCATTCACATGCGCACCCATACCAAGGAGCGACCGTTTGGCTGTAGCGTTTGCGGGAAACGTTTCCTGATGCACGTGCACCTGACTGTTCACATGCGATCGCACACCGGCGAGAAACCGTTCGCATGTACGCTGTGCGAGAAGGCATTCACAACGCGCTATCAACTGAAAACGCACAATTATGTGCACACTGGCGAGAAGAATTACGAGTGCGACGTGTGCCATCGGAAGTTCAGCAGCGCCACTAACCGGAACACTCATCGGAAGACGCACGATCGAACAATTTCCTGA
Protein Sequence: MDNFAAVAGDAPDFLSCTPPSSSDPKIIYLDRICRTCLEEKEKDQLKDLFEYCLAETIMSCTTISITESDGLPCHICLDCCSQVERSCNFRHMSEQSDATIRSLIEQSVVIKQDSETKYEVLNVVLTDSNGNTETSAVVVPIEEFRFQLVNSSEVSVEQYGDKPTDTVSVMDSSETIAPEEQIPPTVKSTLKEYDDLYSLPVNPNELLNELSQTPPPERRAKEAAVAPGESATKESTILKNLKKELSEFIGSSCTIVPKETEIVDENEDDEMIHVNYLKDALTEEYIQIMETQLASSVPNDIPGTAQEQLEQEHLNNLINASMEAEGSRPVVHSADTEEQSTRHCKLCDVHFGERRLYRAHVKRMHSEKRYECSNCSRKFTDKSMLNNHLLRHTGEKAHVCSECNAKFYERNMLNMHMRTHSGQRPYACEHCDKRFTKRSILTTHLKVHREPRPHVCTVCQKGFKLSWQLKAHTRIHTNEKPFQCPQCQKRFNQNGNLIVHMRTHSGEKPYQCKDCDKAFPSKGELAGHMRQHTGEKKTKKIACSLCPKLFAANYDLAIHMRTHTKERPFGCSVCGKRFLMHVHLTVHMRSHTGEKPFACTLCEKAFTTRYQLKTHNYVHTGEKNYECDVCHRKFSSATNRNTHRKTHDRTIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00098524;
90% Identity: iTF_00098524;
80% Identity: -