Basic Information

Insect: Anopheles albimanus
Gene Symbol: -
Assembly: GCA_013758885.1
Location: NC:61892135-61896013[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.5e-05 0.0012 18.6 4.4 1 23 91 113 91 113 0.97

2 14 7.8e-06 0.00037 20.1 2.3 2 23 174 195 174 195 0.97

3 14 0.32 15 5.6 1.4 1 16 257 269 257 276 0.72

4 14 3.5e-07 1.7e-05 24.4 2.4 1 23 337 359 337 359 0.98

5 14 4.1e-08 2e-06 27.3 0.6 1 23 365 387 365 387 0.99

6 14 3.1e-09 1.5e-07 30.8 2.2 1 23 393 415 393 415 0.99

7 14 5.3e-09 2.5e-07 30.1 1.8 1 23 421 443 421 443 0.98

8 14 0.00021 0.01 15.6 0.2 2 23 446 467 445 467 0.95

9 14 0.00021 0.0098 15.7 0.4 1 23 473 496 473 496 0.97

10 14 1.7e-08 8.1e-07 28.5 4.7 1 23 502 524 502 524 0.99

11 14 0.00013 0.0064 16.3 0.8 1 23 530 552 530 552 0.98

12 14 2.4e-08 1.1e-06 28.1 1.8 1 23 558 580 558 580 0.99

13 14 1.5e-06 7.1e-05 22.4 1.6 1 23 586 608 586 608 0.98

14 14 2.1e-08 1e-06 28.2 2.0 1 23 614 636 614 636 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.5e-05	0.0012	18.6	4.4	1	23	91	113	91	113	0.97
2	14	7.8e-06	0.00037	20.1	2.3	2	23	174	195	174	195	0.97
3	14	0.32	15	5.6	1.4	1	16	257	269	257	276	0.72
4	14	3.5e-07	1.7e-05	24.4	2.4	1	23	337	359	337	359	0.98
5	14	4.1e-08	2e-06	27.3	0.6	1	23	365	387	365	387	0.99
6	14	3.1e-09	1.5e-07	30.8	2.2	1	23	393	415	393	415	0.99
7	14	5.3e-09	2.5e-07	30.1	1.8	1	23	421	443	421	443	0.98
8	14	0.00021	0.01	15.6	0.2	2	23	446	467	445	467	0.95
9	14	0.00021	0.0098	15.7	0.4	1	23	473	496	473	496	0.97
10	14	1.7e-08	8.1e-07	28.5	4.7	1	23	502	524	502	524	0.99
11	14	0.00013	0.0064	16.3	0.8	1	23	530	552	530	552	0.98
12	14	2.4e-08	1.1e-06	28.1	1.8	1	23	558	580	558	580	0.99
13	14	1.5e-06	7.1e-05	22.4	1.6	1	23	586	608	586	608	0.98
14	14	2.1e-08	1e-06	28.2	2.0	1	23	614	636	614	636	0.98

Sequence Information

Coding Sequence: ATGCTgtggccactgccaccgccgccgccaccaccaccggaggatTCGTCAGCCGACAGGAAACCACCGTTGGCAGCAGTTATCTGCAACCGTCTGCTTCATCGCTCGAACACGTACCCACccgggcagcagcacatgGAGCGAACAGTAAAACTAGTCCCCCGTTGCTGCTTGCTCAGCACAGCATCAAGAGTGAGTACGCTGGTACCGCGCGGTATCGGCTCGCTAGCGAGCGGTCAGTTCTCCTCACCGTACGGTATTATCAAGCAGTTTGACTGCCACATCTGCCATAAATCGttcatgacgatgatgaacctCAATTTGCACATGAAGATCCATGAAAACGACCAGAAGGTGGTCGCCGCACACGTGTATTCGTCGCACGCAGGAGCCACCGGTGCGACCTATCACCAACAGCAaggccatcaacagcagctccaTCCGACGCTGCTGCAGGCGGCTTCGTCGTCTGGGGCTGTTCCCTCGACTACTGCGTCAACAGGACGTAACACCGACGGTGTTTGCCAGATTTGTCACAAAACATTCAACAGCACGGAACAGTTTACCGCCCACATGAAGATCCACgaggaagaatttaaaaatcgTGCCCTTTACcactcctccaccaccacaggTGGCAGTACGGCAGTGGCTGCCAGTGCTGCAGCGTTCTATCCTACTCTGCCACAAACAGCAACATCCTCAGCCAcacaatcgcagcagcagcagcagctcccaaCGGTAACTTTGTATCAAAGCTCCAAGGGGCACCGTTGCCCGATCTGCCACAAAATGTCCAGCAACATTATTGAGCACATTAAGCAGCACGAAGGACAGCTAATAATGGGCGGAGGTGGATCGTCGGCGCCgggaaccggtggtggtagtccATCGGGTGATCGGTCCTGCGCCACGCCCGGTTACCAGCTGAACGAGGAAACATCGCAGGCATCTTCGCTGGCGGAGGGCAGCGATAATGAGgccggcgatgatgatcagcgCAAGCAGCACGAGTGCTTGATCTGTCACAAAAAGTTCTCCAGCTCGAGCAATCTGGCCATCCACATTCGGGTGCACTCGGGGGAGAAACCGTTCAAGTGTAGTGTCTGCGGCAAGGGCTTCATCCAGTCGAACAATCTGGCCACGCACATGAAAACGCACACCGGCGAAAAGCCGTACACGTGCACGATCTGTGGCAAAAAGTTTAGCCAATCGAACAACCTGAAGACACACATCCGGACACACACGGGTGAGCGGCCGTACGCGTGTACGATCTGTGGGAAGCGGTTCAACCAGAAGAACAACCTGACCACGCACATGCGCACGCATCAGCTGGTGTGTATGGTGTGCGGGGTCCAGTTTGCGCATCCGACCGATCTGGCGAACCACATGAAGTTCCACAACGACGAGAAACCGTACATTTGCTCGGTCTGCAACAAGGTGTACCTCAACCTGGATGAGCTGACCGAGCACATGAAGAAAACGCACAACCAGGTCAAACCGTACCGGTGCCACATCTGCGACAAGACGTTCACGCAGTCCAACAACCTGAAGACGCACATCAAGACGCACATCTTCCAGGATCCGTACAAGTGCCAGATGTGTTCGCGCTCGTTCCAACGAGAGGACGAGTACGGTCAGCACATGCTCGTCCATACGGCCGACAAACCGTACGAGTGTACGTACTGTGGCAAGCGCTTCATCCAGTCGAACAATCTGAAAACGCACGTACGGACGCATACGGGCGAGAAACCGtacagctgctcgatctgtcTGCGGAACTTCAACCAGAAGAACAACCTGAACACGCACATGCGCATCCACACCGGCGAGAAACCGTTCGAGTGTACGATCTGCGACAAGCGGTTCAATCAGTCGAACAACCTGAACAAACACATAAAGACGCACGgccaggagaaggagcagcagcagcagcagcaacagcagcagcagctgacgttgcaacatcaccaacagcagcaccagcaccatcagcaacagcagcttccaAGTTGA
Protein Sequence: MLWPLPPPPPPPPEDSSADRKPPLAAVICNRLLHRSNTYPPGQQHMERTVKLVPRCCLLSTASRVSTLVPRGIGSLASGQFSSPYGIIKQFDCHICHKSFMTMMNLNLHMKIHENDQKVVAAHVYSSHAGATGATYHQQQGHQQQLHPTLLQAASSSGAVPSTTASTGRNTDGVCQICHKTFNSTEQFTAHMKIHEEEFKNRALYHSSTTTGGSTAVAASAAAFYPTLPQTATSSATQSQQQQQLPTVTLYQSSKGHRCPICHKMSSNIIEHIKQHEGQLIMGGGGSSAPGTGGGSPSGDRSCATPGYQLNEETSQASSLAEGSDNEAGDDDQRKQHECLICHKKFSSSSNLAIHIRVHSGEKPFKCSVCGKGFIQSNNLATHMKTHTGEKPYTCTICGKKFSQSNNLKTHIRTHTGERPYACTICGKRFNQKNNLTTHMRTHQLVCMVCGVQFAHPTDLANHMKFHNDEKPYICSVCNKVYLNLDELTEHMKKTHNQVKPYRCHICDKTFTQSNNLKTHIKTHIFQDPYKCQMCSRSFQREDEYGQHMLVHTADKPYECTYCGKRFIQSNNLKTHVRTHTGEKPYSCSICLRNFNQKNNLNTHMRIHTGEKPFECTICDKRFNQSNNLNKHIKTHGQEKEQQQQQQQQQQLTLQHHQQQHQHHQQQQLPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00092532;
90% Identity: iTF_00092532;
80% Identity: iTF_00092532;