Basic Information

Insect: Anopheles albimanus
Gene Symbol: -
Assembly: GCA_013758885.1
Location: NC:87152364-87167719[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00028 0.013 15.3 1.9 1 21 203 223 203 224 0.95

2 17 0.28 13 5.8 0.1 2 16 257 270 256 272 0.81

3 17 1.2e-05 0.00059 19.5 6.2 1 23 657 679 657 679 0.98

4 17 4.5e-07 2.1e-05 24.1 0.5 1 23 685 707 685 707 0.99

5 17 3.5e-06 0.00017 21.2 0.2 1 23 713 735 713 735 0.98

6 17 4.2e-05 0.002 17.8 0.6 2 23 741 762 740 762 0.96

7 17 4.1e-06 0.00019 21.0 5.0 1 23 768 790 768 790 0.99

8 17 0.00026 0.012 15.4 2.2 1 23 876 898 876 898 0.97

9 17 6.8e-06 0.00032 20.3 2.5 2 23 905 926 904 926 0.98

10 17 2.1e-06 0.0001 21.9 0.8 1 23 932 954 932 954 0.98

11 17 2.7e-06 0.00013 21.6 0.1 2 23 960 981 959 981 0.98

12 17 2e-06 9.4e-05 22.0 2.1 1 23 987 1009 987 1009 0.99

13 17 4.3e-06 0.0002 21.0 2.2 1 23 1067 1089 1067 1089 0.99

14 17 8.9e-07 4.2e-05 23.1 2.4 1 23 1095 1117 1095 1117 0.99

15 17 5.3e-05 0.0025 17.5 0.3 1 23 1123 1145 1123 1145 0.98

16 17 3.7e-06 0.00018 21.1 0.3 2 23 1151 1172 1150 1172 0.98

17 17 5.9e-06 0.00028 20.5 1.0 1 23 1178 1200 1178 1200 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00028	0.013	15.3	1.9	1	21	203	223	203	224	0.95
2	17	0.28	13	5.8	0.1	2	16	257	270	256	272	0.81
3	17	1.2e-05	0.00059	19.5	6.2	1	23	657	679	657	679	0.98
4	17	4.5e-07	2.1e-05	24.1	0.5	1	23	685	707	685	707	0.99
5	17	3.5e-06	0.00017	21.2	0.2	1	23	713	735	713	735	0.98
6	17	4.2e-05	0.002	17.8	0.6	2	23	741	762	740	762	0.96
7	17	4.1e-06	0.00019	21.0	5.0	1	23	768	790	768	790	0.99
8	17	0.00026	0.012	15.4	2.2	1	23	876	898	876	898	0.97
9	17	6.8e-06	0.00032	20.3	2.5	2	23	905	926	904	926	0.98
10	17	2.1e-06	0.0001	21.9	0.8	1	23	932	954	932	954	0.98
11	17	2.7e-06	0.00013	21.6	0.1	2	23	960	981	959	981	0.98
12	17	2e-06	9.4e-05	22.0	2.1	1	23	987	1009	987	1009	0.99
13	17	4.3e-06	0.0002	21.0	2.2	1	23	1067	1089	1067	1089	0.99
14	17	8.9e-07	4.2e-05	23.1	2.4	1	23	1095	1117	1095	1117	0.99
15	17	5.3e-05	0.0025	17.5	0.3	1	23	1123	1145	1123	1145	0.98
16	17	3.7e-06	0.00018	21.1	0.3	2	23	1151	1172	1150	1172	0.98
17	17	5.9e-06	0.00028	20.5	1.0	1	23	1178	1200	1178	1200	0.98

Sequence Information

Coding Sequence: ATGATGGACGTGTTCGATACGACGGATTTTAATCCGGAACTGATATTGTCCAGTGTACTGTTGGATGCCGGTTTCGACATCGTTGCCAATATCGAGGAGCTGAGCGATAACATGGTGACCAACGATTTGATGCAGCAGATAGGCAGTTCCGCTGTTTACGCCGAAGCTCCTACCATCAACGCGGCCAcaagcagtagcaccagcagcatgcacGGTGTCGAAGAAGCTTCGCAGCATTTTCTACACTcgcaaatgcagcagcagcagcagcaacagcaacaatattTACAATCACAGCAAGGGATTGCATCGATTTCCTCAAAACAGCGGCCTTTGGTTGAGaATAACGCTCCAAAATTCGACAACACATCGTCAACGAACAACGAACTCTTTGGAAGTACTTTGACTAAGCAGTTCCTTCCTGCAACGGGATTACCAATGATCCAAactatgcagcagcagcagcagcagcagcagcaaatttcTCAAATTCAGGCACcaatccagcaacaacaaccgcaacaacagcaacagcaacaatcgtGCAGATGTGAGTTCTGCGAGTATCTGCAGGCCAACCGCATCTCCCTCACCGGAGATCACTCCTTTCAGTGTGAGTTTTGTGGGGAAGGTTTTTCCAACCAAAACAGCTACAATCGGCATCGGTGCGGTAGCACCGACATACAAGTGTACCGTTGTGAAAGCTGTCGCCATGAGTACGGTACCTCGCGCACAATGCCCACAATCAACAGCGGCGAACCTCGTGACAAATGTGATATCTGCAATCGGAatttcgatcaatcgatgcTAGAGGATCGCGTGAGCTGTGGACCAGTACctccaccattgccaccgacaCCCATCAGTAACTCATTAGCATCAATGGAAACAGTGCCAACAATGGGTGTAGTAGCTGTACCTCCTCCCATGGGGACCGCCAACAGCAGTGTGGTCGGGAacggtagcaccagcaacctTGCCTCTAGCAAATCCTATAACGTACCGATCCTCTTGGCATCGGTTTCCTCCACTTCGCCAGCTGGAACGTTTCGAGACACATCCAATGGTGGAACCAGCGATctcagtgctgctgctagtgtccGTTCGATCGCCGATAGCCCGATGGAGCACGATATCGGTACGCTTGATCCGTTCGGATCGGACAGCGAGTGCATTAGTGAATACCTTGGGCACGAATCCATGTCATCCGGAGCGTACGCCTCGACGTACTGTACCGGCCGAAAGATGGAATGTACACTGAGCGAGTCTTCCGGTACCACGGGCTCTCTACTACCGGAGTCGGCCAAAACATACTTCGTGCTCGGCAATgtcgagctgcagcaaccggttCATCCGACAACCAACAATTCGGCGGACATACCGCCGACACCCGTGTCCCAGCATAATGCCAACAGTATTAGCGCCAATGGTTACCAGCACCGTCACATACCactacagcagcagacggTTCCTCCACCgttgcaccatcatcagcaaccaccGTTGTCTCTGCCTAATCTTCTACATCATTTAGCTCCCAAAGAGTACGAGGTAACCAGCCTGCAGCAGTACGATGATCAGCACTACGACGATGAGGATTACTCCACCATGTCCGAAGATGAAGCTATTGTTCCAACAGAACCTTATGCGAAATCGCCCAATCAGGACCACGCCAAAACGGAGCTACCAATACAGGATACGATCGTGGATACGAGCACCAAGACGTTGCTGCCTCCTCCGGTCACGCATCTGGGCAACACGACAAATCAATACGCAATGCATGAGCTCAAACCGCCGATGGCCATCGACGCGCTGGGACCTATTGGACCATTGTCACGCTGTgccgatgaggaggagggcGGTAAATGTGACTCATCGTCCTCGCTGAGGTCTACGGGAGGCCTGACGCAAAAGTCGAATGCCGAAGGAGTGCCGGATGCGTCGCGCGTTGGATCAACCGATCGTCCGCACAAGTGTCACATCTGTGAGCGGTCGTATCGGAATCAAAAGAACCTCAAGTCACACCTGAAGGTGCACGAGGGCATACGGGCGTATCAGTGTGAGATATGTGGAAAGAATTTTTCCGGTTCCAGCTACCTGGTCATCCACCGGCGGCGCCACACCGGCGAACGGCCGTTCAAGTGTTCCACCTGTGGCAAGGCGTTCGTCGATTCGCGGGCCCTCGCCGTCCACACGCGCCTACACAGTGGCGAACGGTTGAAGTGCGAAAAATGCGAAAAGACGTTCTCCAGCGTCAGTGCACTCACCGTCCACAACCGGCTGCACACTGGCATTCATCCTTACAAATGCGAACTGTGCAGCAAGACCTTCCCTCAGTACAACAACTTGAAGCACCACATGAAGAAGCACGACCAGCCGACGGGGCCGGCCGAAAAGAAGACCCCAAATGGTCTGTGTactagcaacagtagcaactccacctccagcagcagcagcagtagcagcagcaccaacaccactatCAGCAACTACTCTTCGGTGTCCAGTAGTGCTCTAGAGGGACAGATGCACGATCCCGCTGCAGCCAGTGTTGCCACGCACCTGCCCGTACCACAGCCTACTCAAGCGATGGTACCGAGCTCGACCACTAGCAACATGTTTGACTTCAAATGTCACATCTGCAGCAAGCTGTACAAATCTTCCGCCGAGCTTCAGGACCATCTTAGTCAGCACAGCAAGGAGCGACCGAATCAGTGTGAGTTCTGCTCGAAGGTGTTCCCACGTTCCTCGCATCTGATCATCCACCGGCGCCGGCACACCGGTGAGCGGCCCTTCAAGTGCAAATACTGTGACAAAGCGTTCGTCGATTCGCGGGCTCTCTCGGTGCACACGCGACTCCACACCGGGGAGCGTGTGAAGTGCGAAATTTGTGAGAAAACCTTCGCCAGCTCCAGTGGTCTGATCGTCCATCGACGCATCCACACTGGCATCCATCCGTACAAGTGTGACTATTGTGAAAAATCGTTCGCACAATCCACCGCACTCAAGTATCATCTGAAGAAGCATGATACGTCCTCTCTGCCAACGACCACTACCACGACCACCGTGGCTACGGCCCCGGgggatgctgcagctggtgctgccgctgccgcaaGCAGCGCAGCTATCGGCAGCACATCCAATCAGCAGACGATACCGGCTAGCACCGGTGGTGAGGCAACCGGTGGAAACGATCGGTACAAGTGTCTCACGTGCGGGAAGCTGTTCCGATCCTCGGAATACCTGGTGCGCCATCGGCGTACGCACAGCGGCGAGCGGCCGTATCAGTGCGAGATCTgcggaaaacacttttccaccaTGAGCTATCTAGTCATCCACCGGCGGCGCCACACCTCGGAGCGGCCCTACAAATGCACCTCCTGCGAGAAGGCGTTCGTGGATTCGCGCGCACTGCAGGAACACGCGCGGCTCCATACCGGCGATCGGGTCAAGTGTGAAATATGCCAGAAAACCTACTCGAGCGTCAGCAATCTGATCGTGCACCGGCGCATCCACAGCGGGATACATCCGTTCGAGTGCGGTAGCTGCGGTAAATCGTTCGCCCAAAAGAACGCCCTCAAGTATCACTTGaaaaagcacaacaaacaagcCGAGACGGTCAAAAATGAATAG
Protein Sequence: MMDVFDTTDFNPELILSSVLLDAGFDIVANIEELSDNMVTNDLMQQIGSSAVYAEAPTINAATSSSTSSMHGVEEASQHFLHSQMQQQQQQQQQYLQSQQGIASISSKQRPLVENNAPKFDNTSSTNNELFGSTLTKQFLPATGLPMIQTMQQQQQQQQQISQIQAPIQQQQPQQQQQQQSCRCEFCEYLQANRISLTGDHSFQCEFCGEGFSNQNSYNRHRCGSTDIQVYRCESCRHEYGTSRTMPTINSGEPRDKCDICNRNFDQSMLEDRVSCGPVPPPLPPTPISNSLASMETVPTMGVVAVPPPMGTANSSVVGNGSTSNLASSKSYNVPILLASVSSTSPAGTFRDTSNGGTSDLSAAASVRSIADSPMEHDIGTLDPFGSDSECISEYLGHESMSSGAYASTYCTGRKMECTLSESSGTTGSLLPESAKTYFVLGNVELQQPVHPTTNNSADIPPTPVSQHNANSISANGYQHRHIPLQQQTVPPPLHHHQQPPLSLPNLLHHLAPKEYEVTSLQQYDDQHYDDEDYSTMSEDEAIVPTEPYAKSPNQDHAKTELPIQDTIVDTSTKTLLPPPVTHLGNTTNQYAMHELKPPMAIDALGPIGPLSRCADEEEGGKCDSSSSLRSTGGLTQKSNAEGVPDASRVGSTDRPHKCHICERSYRNQKNLKSHLKVHEGIRAYQCEICGKNFSGSSYLVIHRRRHTGERPFKCSTCGKAFVDSRALAVHTRLHSGERLKCEKCEKTFSSVSALTVHNRLHTGIHPYKCELCSKTFPQYNNLKHHMKKHDQPTGPAEKKTPNGLCTSNSSNSTSSSSSSSSSTNTTISNYSSVSSSALEGQMHDPAAASVATHLPVPQPTQAMVPSSTTSNMFDFKCHICSKLYKSSAELQDHLSQHSKERPNQCEFCSKVFPRSSHLIIHRRRHTGERPFKCKYCDKAFVDSRALSVHTRLHTGERVKCEICEKTFASSSGLIVHRRIHTGIHPYKCDYCEKSFAQSTALKYHLKKHDTSSLPTTTTTTTVATAPGDAAAGAAAAASSAAIGSTSNQQTIPASTGGEATGGNDRYKCLTCGKLFRSSEYLVRHRRTHSGERPYQCEICGKHFSTMSYLVIHRRRHTSERPYKCTSCEKAFVDSRALQEHARLHTGDRVKCEICQKTYSSVSNLIVHRRIHSGIHPFECGSCGKSFAQKNALKYHLKKHNKQAETVKNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00098509;
90% Identity: -
80% Identity: -