Aali009145.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles albimanus
Gene Symbol
Hr39
Assembly
GCA_013758885.1
Location
NC:68910356-68942731[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3 1.1e+04 -6.1 10.1 76 189 96 217 49 241 0.47
2 5 3 1.1e+04 -12.1 15.3 52 129 208 283 181 436 0.66
3 5 0.62 2.3e+03 -3.0 2.2 48 64 491 507 470 544 0.48
4 5 4e-08 0.00015 20.6 0.0 1 21 611 631 611 647 0.87
5 5 5.7e-78 2.1e-74 250.7 0.0 176 408 756 984 710 984 0.87

Sequence Information

Coding Sequence
ATGAGAATAATGACCTCGACGGAGATCAGCGGATCGCCGACGAGCCGCGGCGGTAACGTGTCCGTTACGGCGATCAActgtggtgacgatggtggtggaggaggcggaggaggaggcggaggaggaggaggaggtacaCCGATCTCGCTCGAGACAGCAAAACTGATGAGCAacgctgcagcggcagcggcagttggcaataccaccaccaacaataacaacaacaacaatcatataagcaacaacaacaataacaacagcagcagcagcaacagcaacagtggagCAACGATCTTCGGAAACGTGGGAAGCGTGAGCGGCGGCATACGGATCACCGTGCCGAAGATGGAGGAATCGGACGAATCCGATACGGAGCTGTCGAATATTGAAAAATCCGTCACGAATGGTGTGGTGGTCAGTATGCGTGAGCATGAGCGAAGCGCCAGCAAGAGTCTGCCACGTCCAATGTCCTGGGAGGGTGAGCTGTCGGAACCGGAGGCCATGCTGGTGGACAACgagaacagtagcagcagctgcagtacgACCAgcgcaccggtaccaccggtggcgcAGGCTGCCAGTTTGATGGCACCGATTGAACCGGTGCTTTCGCTGAAACAGGAACAACccgatgatcagcagcaacagcagcaccagcaccagcaccttcatcatcatcatcatgcgcacCAGCATCTGCTGCAACCGGAAGCCCTTACTAGTGGTCCGGGAATAACCGAGCCGCTGGCACTAACGacaaaccatcagcagcagcagcagcaacatggtGGTCCGGGTGTCACGTACCGATCGTCCGGTAGTAGCGCCAGTAACAACTCACCACTGCCCTCGTCCGGGCGGCTAGTGATCAAACCCGAATCCGGACTGCCACTGATCAATCCCGGGCTGGCGTACAGCGTTggcccgccgccaccgacatCGACAAACATTCCACCGGCGGCGCCATCCGCACCGACCGGCTCGGCGGGCACGGTCACCGTGAAGAAGCTGCCGGATGTGATCAACCTCAAGTATGAGCTGCCAACGACGGAACCATCGGGTGGCGGTGCATCCAGCATACACTCACCGTTGCTCGTGCGCTCCAAGACGACATTGCTGCCGGCGAACCCTAGCCCCGATTCGGCCATCCATTCGGTGTACACCCACAGCTCACCGAGCCAATCGCCGCTGACGTCGCGGCACGCACCGTACACCCCTTCGCTGAGCCGGAACAACAGTGATGCATCGCACAGTAGCTGCTACTCGTACTCGTCCGAGTTTAGCCCAACGCACTCGCCGATCCAGGGCCGCCATAGTATCTTCGggggtagcggtggtggtggtggtggtggtggtggcggtggtggtggtatgggGAGTAATGGACCGAGTGCCTCCTTCAATGGGTCACCCCTGCATCACTCAGTATTATTCAAACCGATGCTAgacgcgagcgagcaacaggcccagcaacagcatcagcagcagcagcagcagcagcaacagcaggcagcgctgaagcagctggcagcggcggccgcagcctCCCAGGAGGAGCCACTCTACGAAGGGGACCATCTACCATCGCCCGGGATATCGAGGCAACAGCTGATCAACAGTCCTTGTCCGATCTGTGGCGACAAGATATCCGGCTTCCATTATGGCATTTTCTCGTGCGAATCGTGCAAAGGGTTCTTCAAGCGGACGGTCCAGAACCGGAAGAACTACGTGTGCCTTAGAGGAGCGGCCTGTCCGGTAACGATAGCAACGCGCAAAAAGTGCCCTGCCTGTCGCTTCGAAAAGTGCCTTCAGAAGGGAATGAAGCTGGAAGCCATTCGAGAGGATCGTACCCGGGGAGGCCGCTCGACGTATCAGTGTTCGTACACCCTTCCCGGTCCACTGGTGAGCGCCAGCAGTGGCATGCAGTCGGGCAGTGACTCACCGATTGCCGGGCCATTCCAATATGGCGGCAATTCGGCGGTCCGTTCATCACCgtacggcggtggtggtggtggtcccggaggtgctggtggccatcagATGAAGCTTGAACCAGGTGACGGTGGATCCGGTGGACTGATGATGACcggtggtaacggtggtggtagcggcggtAATGGTCTCAACGGCATGACGATGGATCGTATGGGATCGAACGGTGAAGCCGGTGGGCCGAGCAGTGGCAACCATCTACAACCAGGCATTCCAGTGCTGCTACAGGAAATCATGGACGTGGAACCGCTGTGGCAGTACAACGCGGCTGAGCTGGCGCGGCTTAATCAACCACCGCCCGCGGTCAGCAGTGCAGCGATCGCAAGCAATCCCCTGCTCTCTAGTGCTGGCATTTCCTCCGAAAGCAGCCCCGATCTGATCGCTAACCTGTGCAACATTGCCGACCATCGGTTGTACAAGATCGTCAAGTGGTGCAAGAGTTTGCCACTCTTTAAGAACATTTCGATCGATGACCAGATCTGCCTGCTGATCAACTCGTGGTGTGAGCTGCTTCtgttctcctgctgctaccgctcgaTCGCGACACCGGGCGAGATCAAAATCTCGCTCGGCAAGTCGATAACGCTGGAGCAGGTCAAGAACAGTGGGTTGCAGACCTGCATCGAGCGCATGCTTCACCTGACGGACCATCTGCGAAGGCTACGTGTCGATCGGTATGAGTACGTCGCGATGAAGGTGATCGTTCTGctctcttccgatacctccgAGCTGAAGGAATCGGAGAAGGTGCGAGCCAGCCAGGAGAAGGCACTGCAGGCGCTGCAAGCGTACACACTAGCGTACTACCCGAAGTCACCGGCCAAGTTTGGTGAGCTGTTGCTGCGCATTCCCGAACTACAACGCACGTGTCAGGTTGGTAAGGAGATGTTGACGATCAAATCGAAGGACGGTGAGGAACCATCGTTCAACTTGCTGATGGAACTGCTCCGTGGCGAGCATTGA
Protein Sequence
MRIMTSTEISGSPTSRGGNVSVTAINCGDDGGGGGGGGGGGGGGGTPISLETAKLMSNAAAAAAVGNTTTNNNNNNNHISNNNNNNSSSSNSNSGATIFGNVGSVSGGIRITVPKMEESDESDTELSNIEKSVTNGVVVSMREHERSASKSLPRPMSWEGELSEPEAMLVDNENSSSSCSTTSAPVPPVAQAASLMAPIEPVLSLKQEQPDDQQQQQHQHQHLHHHHHAHQHLLQPEALTSGPGITEPLALTTNHQQQQQQHGGPGVTYRSSGSSASNNSPLPSSGRLVIKPESGLPLINPGLAYSVGPPPPTSTNIPPAAPSAPTGSAGTVTVKKLPDVINLKYELPTTEPSGGGASSIHSPLLVRSKTTLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHSIFGGSGGGGGGGGGGGGGMGSNGPSASFNGSPLHHSVLFKPMLDASEQQAQQQHQQQQQQQQQQAALKQLAAAAAASQEEPLYEGDHLPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTIATRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPGPLVSASSGMQSGSDSPIAGPFQYGGNSAVRSSPYGGGGGGPGGAGGHQMKLEPGDGGSGGLMMTGGNGGGSGGNGLNGMTMDRMGSNGEAGGPSSGNHLQPGIPVLLQEIMDVEPLWQYNAAELARLNQPPPAVSSAAIASNPLLSSAGISSESSPDLIANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCYRSIATPGEIKISLGKSITLEQVKNSGLQTCIERMLHLTDHLRRLRVDRYEYVAMKVIVLLSSDTSELKESEKVRASQEKALQALQAYTLAYYPKSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEEPSFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00092870;
90% Identity
iTF_00092187; iTF_00092219;
80% Identity
iTF_00092187; iTF_00092219;