Aali003529.1
Basic Information
- Insect
- Anopheles albimanus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_013758885.1
- Location
- NC:39545127-39547722[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-75 1.1e-71 240.9 16.1 2 297 29 333 28 336 0.86 2 2 0.061 3.4e+02 -0.4 6.4 19 235 368 407 337 418 0.50
Sequence Information
- Coding Sequence
- atggaCACTCCCGTCGGGCGTCGCCGGAGTAATTCTCGCGTGAACGCCGAAGACCAGGCGCTGGATCAAATCGCCAAGGAAGGAGAAGCTCGCCTCGCGGCCATCCGACAAGCACGTGCCGAGGCCCGCGAGATCCGGATGCGCGAGCTGGAACGCAAACACCGGGCGCAGGAAGTGAACGCGGACCGTGCGTTCGATCTGCAACAGATGGTCGCCACAACGGAAGGAGCCgcacctggtgctggtgggaaaCCCGGTGGTAACGTCATCTTGCCCTCCACCAGTTGCTCCAACGCCCTGCTAGCATCCCGCATCGAGCGTGCCGTCACCGATCTGGCCTCGTCGAGCGCAAAGATCGTTGCCAGCTCTAACAATACGACCGCCACGAAGGAAGAGTTGCTGCAATGTATGTCGAACAATCTGCAGGAGGTGCGGGATTGCTTCCGCTCAAACATGGTCGAGTTGGCGCAGCTCGATAACGATCGGACTGCCTGCAGCTATCAGATTGAGCTGCTGAAGGACTCGTTGAACGACGTGGAGGAGGAGTTCGCGCAACTGCAACGCGAATATCGCGACAAGTGCAAGGATCGCGAGGCGACGAAGCGAGAGAATGACAAACTACTCGAGGAGATTCGACTCGTTCAGGgtcagctgctggagcgcGATTCGCTTATCGCCAAGCACGGGTTGATCATAGTAACTATTGAGAATGAAGACGGCACGGATGCCCATCGGGCTCTGGTTAGCAACGAGAACGCTGACCTACTAGGATCCGCCACGGGTTCGTTGGATACTCGCCTGCAGCAGTTCGCCAAGGAGAAGGCCGAACTGCAAGCCCAACTTCAGACCCTACAGGAGGAGCTAAAGGATATCAAAAGCAAAGGGCGTCGATCGGTGCCACCGGGCGGAGGGGACGACGACTACAATGAGGACGCGCTGCGAGACGCCAACAAGCAGATCAACGAATACCGAAACCGGCTGCAGAGTGCGCTGAAGGAGAACGGAAATCTGCAGGCCAGCCTAGCACGCGCCGAATCGTTGGTGATTCGCTTCCGCAGCACTGCCGAGGCATCCGAGAGGGCCGAGAACGAGCTTAAGCTGGAGCGTCGCAAGCTGCAGCGTGAAAAGCGTGAGGCCGAAGAGCGTGCTGACGAGCTCGAGACTACCAATAATCATCTTCGAACACGACTGGAGAAAATGCGTTCGTCCAAGAACGCGCTGCTAAAGTCGCTCGATAGGCGGCTTGATGAAGACTGTtga
- Protein Sequence
- MDTPVGRRRSNSRVNAEDQALDQIAKEGEARLAAIRQARAEAREIRMRELERKHRAQEVNADRAFDLQQMVATTEGAAPGAGGKPGGNVILPSTSCSNALLASRIERAVTDLASSSAKIVASSNNTTATKEELLQCMSNNLQEVRDCFRSNMVELAQLDNDRTACSYQIELLKDSLNDVEEEFAQLQREYRDKCKDREATKRENDKLLEEIRLVQGQLLERDSLIAKHGLIIVTIENEDGTDAHRALVSNENADLLGSATGSLDTRLQQFAKEKAELQAQLQTLQEELKDIKSKGRRSVPPGGGDDDYNEDALRDANKQINEYRNRLQSALKENGNLQASLARAESLVIRFRSTAEASERAENELKLERRKLQREKREAEERADELETTNNHLRTRLEKMRSSKNALLKSLDRRLDEDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00092815;
- 90% Identity
- iTF_00092815;
- 80% Identity
- -