Aali008298.1
Basic Information
- Insect
- Anopheles albimanus
- Gene Symbol
- PAXBP1
- Assembly
- GCA_013758885.1
- Location
- NC:8411343-8416866[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.66 3.7e+03 -3.5 0.0 67 94 485 512 471 518 0.80 2 2 7.6e-37 4.3e-33 114.4 0.0 2 271 542 766 541 768 0.94
Sequence Information
- Coding Sequence
- ATGCCTACCTCAGATGCGTCAGATGGAACGCTCACGCGTGAACCATCCACGTGTAGCCGTGCCAAGATAGCTCAAGACTCAGCTGCACCTTTGTACGACCCTAATGGCcgcttttcatttgttttgcttctctcaCTATCGCAACGCGTACGCTGTGTGTGGTTGCAGCTGGTGGTCAAGAAATCGGATCCCGAGAATTTAATACTGAATGGCCGGGCGGCACTGTGCGCCGGTCGGGACGATATGTCCTcggaggatgacgatgacacgCACGACGATGAGTCGAATGGCCGgtcgaagcagcaacaaccgcaccaTCGGTTCTCGAAGCCACAGGACAACTTTAAGATGTGCCTGGAAAACGGTGTCATACCGGATGCGGCCATGATTCATGCGGCCCGCAAACGACGCCAGAAGGCACGGGAACAAGGTGAATTCATTCCAGTCGAGGAACCGAAGGAGGACAAAAACAAGAAGCGAACGGTACAGGAGGACGGCGATGGGGACGGttcggacgaggacgacgatcgGATCGATATGTCGGCCATAACCGGTGCCAAAGAGCGCGAGGAGCGCCGCGAGCAATTCAACGCCATCCAGCGTGAGGATTCCGATGCAGAAGATTCGGACATCGAAACGAAGGAGTGGGAGAACCAGCAGATTCGCAAGGGCGTGACCGGTGCGCAGCTAGTGTCCGCACAGCAGGAATCCATCATCTCGCAGTACTTAATGCAAAGCAGTGGCCGCCCGACTGGTGGCAATGGGCACTTTAGCCAAACCTTTCAAAACCATTCGAACCGCGGTCGCGGGCACGGCGGTGCCTCcagtgatgacgacgacgatggcacacTGGCCGGTTTGCGGTCGCTAACAACGGcggagctgctcgagcaaGCGTACGCCACGACCAGCGTCGGATTGGCGAAACGGTTGGGACAAGGCAAACAAAGAACGGCCGGCGGCGGCCAAATGTCCGCACCGCCAAAGGGTGGAGGCAcaggcgaagcgaaaccaacTGGCCCGCGAATGCCGCAGCAAATACTGACGCAGCTAACCGAACGGCACCGGGCCACGGTCGAGCTGCATCAGAAGCACACGGACGATATCGAGCACATCACGAAGGAGAtcaagctgctgcagatggatCATCTGGCGTGTGAGCAGcgggcaccggtggcggcggccaagTATCGCTTCTACCAGGAGTTCCGCTGCTATGTGACCGATCTGGTCGAGTGTTTGAACGAGAAGGTACCGCTCGTGGCGGCACTCGAGCAGCGGACGCTCCAGCTGATGGGCCGCCATTCGGCCATGCTGATCGAGCGGCGCCGGCAGGATGTGCGCGATCAGGCGAAAGAGATGGCCGATGCATGCAAAACCACGGCCAAACGGTTACCGGACGATCCGGAACGGATCCGTCGGGCAGCGGAACGTGAGGGTCGCCGAACGAGGAGGCGGCGAGATCgggaaaagaacgaaaccTCCGACAGCCACTACGACGGTATGTCGAGCGATGACGAGATACCGGATATGGAAGCGGCCCGCTATCGGGCCGCCCTCCAGTCGGCCGAGTTGGAGGCGCGTGACATCTTCTCCGACGCGACCGAAGCGTACGGCGAGATCGAGGGCATTCTCGGGAAGTTCGAGCACTGGCGGGATCACGATATGCCCGCGTACCGGGATGCCTACGTTAGCCTGTGTCTACCGAAGATCGTAGGACCGCTGATACGGTTGCAGCACATCACATGGAACCCATTGGTTCCCGGGTTGGACTCCAATGCGACCGGCACctccaccgccatcgccactgtGTCCGACTTCGAGCACGAAGAGTGGTTCCGTGCGGTGGCCCTGTACGGCTGTCGAGTGGACAGCTCAAGTGAAGCCGACCTGACGGACGATCCGGacgtgcggctgctgccgacgaTCGTCGAGAAAATCTTCCTGCCCAAACTGACGGCCCTGTGCGAGCAGTACTGGGATCCGCTGTCGACGACACAAACGCTCCGCCTAGTGCGCCTACTGAAGCGCCTCGTCCGGGACTATCCGTCACTGCGGCTTACCTGCAAACCACTGCGCGCCCTCTTCCAGGCGATACTGGACAAGCTGAAGCAGTCCGTCGATAACGATGTCTTCATTCCGATCTTCCCCAAGCAGGCCCAGGAAGCGAAATCGTCCTTCTTCCAGCGGCAGTTCTGCAGCGGCTTGAAGCTGTTCCGCAACATCACCAGTTGGCAGGGCATACTGGCTGACGGTGCGCTCAAGGAGCTCGCCATCAGTTCGCTGCTGAATCGCTACCTGCTGAACGGTATGCGCGTCTGTACCGCACCGGACGCCATCGGGAAAGCATCCACCATCGTCTATACGTTGCCGCGCGTCTGGCTTACGGCCGGTTCACCGGTTGTGCAGAGCATGGACCAGTTCGTGAACATGCTGCGCCATCTGGAATCTCAGCTGGaaccggcggcagcggtgAATGGGGAACTGATCGAGCAAATACGAAAGATATTGAGCAGCTTGCACGTACTGTCGGCGTAG
- Protein Sequence
- MPTSDASDGTLTREPSTCSRAKIAQDSAAPLYDPNGRFSFVLLLSLSQRVRCVWLQLVVKKSDPENLILNGRAALCAGRDDMSSEDDDDTHDDESNGRSKQQQPHHRFSKPQDNFKMCLENGVIPDAAMIHAARKRRQKAREQGEFIPVEEPKEDKNKKRTVQEDGDGDGSDEDDDRIDMSAITGAKEREERREQFNAIQREDSDAEDSDIETKEWENQQIRKGVTGAQLVSAQQESIISQYLMQSSGRPTGGNGHFSQTFQNHSNRGRGHGGASSDDDDDGTLAGLRSLTTAELLEQAYATTSVGLAKRLGQGKQRTAGGGQMSAPPKGGGTGEAKPTGPRMPQQILTQLTERHRATVELHQKHTDDIEHITKEIKLLQMDHLACEQRAPVAAAKYRFYQEFRCYVTDLVECLNEKVPLVAALEQRTLQLMGRHSAMLIERRRQDVRDQAKEMADACKTTAKRLPDDPERIRRAAEREGRRTRRRRDREKNETSDSHYDGMSSDDEIPDMEAARYRAALQSAELEARDIFSDATEAYGEIEGILGKFEHWRDHDMPAYRDAYVSLCLPKIVGPLIRLQHITWNPLVPGLDSNATGTSTAIATVSDFEHEEWFRAVALYGCRVDSSSEADLTDDPDVRLLPTIVEKIFLPKLTALCEQYWDPLSTTQTLRLVRLLKRLVRDYPSLRLTCKPLRALFQAILDKLKQSVDNDVFIPIFPKQAQEAKSSFFQRQFCSGLKLFRNITSWQGILADGALKELAISSLLNRYLLNGMRVCTAPDAIGKASTIVYTLPRVWLTAGSPVVQSMDQFVNMLRHLESQLEPAAAVNGELIEQIRKILSSLHVLSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -