Basic Information

Insect: Anopheles albimanus
Gene Symbol: bab2
Assembly: GCA_013758885.1
Location: NC:42401621-42481438[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.5e-11 2.4e-08 32.9 0.0 2 39 723 761 722 765 0.90

2 4 2.3e-12 3.7e-09 35.5 0.1 2 39 777 814 776 817 0.94

3 4 3.5e-18 5.6e-15 54.1 0.0 3 45 833 876 831 876 0.97

4 4 2.4e-17 3.9e-14 51.4 0.0 1 43 883 926 883 927 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.5e-11	2.4e-08	32.9	0.0	2	39	723	761	722	765	0.90
2	4	2.3e-12	3.7e-09	35.5	0.1	2	39	777	814	776	817	0.94
3	4	3.5e-18	5.6e-15	54.1	0.0	3	45	833	876	831	876	0.97
4	4	2.4e-17	3.9e-14	51.4	0.0	1	43	883	926	883	927	0.96

Sequence Information

Coding Sequence: atggataCCAAAGGGCAAACGGCCGGGCCGGCGGCCACGCATACCACATATCCGGCGACCTCGCCCTACTCGAAGGCGGCCCGCTCTTCGCATCAGTATTTTAGCCTAAGATGGAACAACTATCAGTCGAACATGACGTCCGTGTtccacgagctgctcgagtCGCAATCCTTCGTCGACGTCACGCTGGCCTGCGAATACAATTCGCTCAAGGCGCACAAGGTGGTCCTGTCGGCCTGCTCGGCGTATTTTCAAAAAATACTGCTCGACAATCCGTGCAAACACCCCACCATCATCCTGCCGGCGGATATCTGCTTCTCCGATCTGCAGTTCATCATCGAGTTCGTGTACCGGGGGGAGATCGATGTTTCGGAAGCCGAGCTACAGAGTTTATTACGGACAGCGGAACAGCTTAAAATTAAGGGTTTGTGTGAGGTAGGAGAGCCACAGTACGAACAGGACTACTCACCCGCAGCCAAACGATACAAACCGTACCGGTCGCGATCGCCACCGGACAATcggaaccatcatcaccatcagcaacctcctccccctcctccGCCACCGGGATCAGGACCCtacggaggcggcggcggcggtggtggcagtagtggtagtggcggtggtggcaatagcggcggcggcagcggcggtagTGGACCTTCAtcaggtggcggtggtggtcgtggcggcaccagcagtggtggtggctctTCTTCGCAAGCGTCCGGTTACAGTGAAAACGGCAAAAACAGTGGCAGCTCGGGTCGAGGGCGatccggtggcggcagcagcagcaccagcaactacCATCTGCCTtccccgcagcagcagcacctgcagcatcCTCTCGCACACCTGCACGGTGTCGATCGGGGCCCACCAACCTTGGCAACGATCGCCGGCACATCGAGCCGCCTCGGTGAGGACGATGGATCGTCGGTGTTAGTGCTAGAGTCGCACGatctcaccaccacctctcggagtggtagtagcagtagaaaAGCCGTTTCCCCCGTGAAGGAtaagcagcaccacctgcagcaccatcTGGCGCACCATCCTGCGCATCATCTACACCGACATCACCtgccgcatcatcaccatcatcatcaacagccacCGGGGCAGCCGCATCATTCGATCGCCAGCAAAATGGCCAGCCTAGGCATGGGCGTTGGAATAAATGGTTCCGTTATGGGCGTACCAATGGGTTACTTGGATTTTGCACCGGAACCACCTGCCCCGACCGCGACGCCGGTGACAGAACATGTGGACATTAATTGTGCGCCTAGCCACGATACCCGTGATCTGTCCAGTAAGTATTCTGTGCCAAACGATGGTGATTTACGAGTGAAATTCGAAACGTTACGTTCACTAGATCATCCGCCGAATGCGGTGCAACTGGACAATCAACAAGTCgtcagccaccagcaacaacagcagcaacaacaacagcagcagcaacaacagcagcaacaacaacagcagcagcaacagcttcaccaccaacagcaacagcaagcgcaacagcaactattgcaccagcagcagcagcatttactacaacagcagcaacaagcgcaTAGACAAACGCCTCAACCACCAGCcgttcagcaacagcagaatgAAATCCAGCGACACTCACCACCacacatgcagcagcaacagcagcaacaacagcaacatgtaATGCTGATTGatccacaacagcagcaccacccgaCCACCCATAGCCCTGCTTCGAGTGTGTCGTCCTCATCTTCCAGCCAGCATCCCGAGAACTTGGTAaccggaggtggtggtggtggtggcggcggtgctggtggttccgtCACACCGAATCCTGCCGTAGGCAACACCGGCAATGGTGGTGAAGAGTTAGAGCCACCGAGACTGAGTTTAAAACAGGAAATTATAACCGATGCTGAgccgcagcaaacgatggaggTCGAGCAGGATCAATCGTCGATGCATGGCAGCAGTGGCATGGTGGTGACGCCTGAGATATCGGGCATTATGAACCAAAGCCAAATGAGCGACATGTACCAGTCGGACGCAAGCGAAGACTCCAAGGTTGGCATTCTGGACGGATCGTCGATCCAGTACACCAATTTGACGAGcccgaacgaagcaaaaactCCGACCGGTCCGAAAACATGGACGGCCGAAGATATGGAATCGGCGCTGGAAGCGTTACGCACTCACAACATGAGCTTGACGAAGGCATCCGCAACGTACGGCATTCCCTCGACGACCCTTTGGCAGCGTGCTCATCGCCTTGGCATTGacacaccgaagaaggaggGTCCCTCGAAGACGTGGAACGAGGATTCGCTAAACAGTGCGCTGGAGGCCCTCCGTACGGGCACGATTTCGGCTAACAAGGCTTCGAAAGCGTTCGGTATCCCGTCCTCAACGCTATATAAGATAGCACGCCGCGAGGGCATCCGGCTAGCCGCCCCGTTCAATGCGGCCCCAACCACCTGGTCCGCCGAGGATTTGGACCGTGCCTTGGAAGCGATCCGTGCCGGGCAGACATCGGTACAGAAGGCGAGTACCGAGTTTGGCATTCCGACCGGTACGCTCTATGGGCGCTGTAAGCGCGAAGGCATCGAGCTGTCACGCTCGAACCCTACGCCATGGTCGGAGGACGCCATGATGGAAGCCTTAGAGTCAGTAAAACAGGGACACATGTCGATCAATCAAGCCGCCATCCACTATAATCTACCGTACAGCTCACTGTATGGCCGGTTCAAACGCGGCAAATACGATACGCCCAGTtcgggcggcggtggcggtggtggcagttcgacaagcgctgctgctgctgctgctgctgctaccggtggcggtaatgttggcggtggcggtaatACTGGAGCACCCGGCGCCCCCAGTAATGTTGGCGGTAGTCCCCAGATGGAGTTTAAGATAGAGCCACAGCATAATGAACATAGTCCAGAAAATACGGTAAATTACAGTTATTATTAA
Protein Sequence: MDTKGQTAGPAATHTTYPATSPYSKAARSSHQYFSLRWNNYQSNMTSVFHELLESQSFVDVTLACEYNSLKAHKVVLSACSAYFQKILLDNPCKHPTIILPADICFSDLQFIIEFVYRGEIDVSEAELQSLLRTAEQLKIKGLCEVGEPQYEQDYSPAAKRYKPYRSRSPPDNRNHHHHQQPPPPPPPPGSGPYGGGGGGGGSSGSGGGGNSGGGSGGSGPSSGGGGGRGGTSSGGGSSSQASGYSENGKNSGSSGRGRSGGGSSSTSNYHLPSPQQQHLQHPLAHLHGVDRGPPTLATIAGTSSRLGEDDGSSVLVLESHDLTTTSRSGSSSRKAVSPVKDKQHHLQHHLAHHPAHHLHRHHLPHHHHHHQQPPGQPHHSIASKMASLGMGVGINGSVMGVPMGYLDFAPEPPAPTATPVTEHVDINCAPSHDTRDLSSKYSVPNDGDLRVKFETLRSLDHPPNAVQLDNQQVVSHQQQQQQQQQQQQQQQQQQQQQQQLHHQQQQQAQQQLLHQQQQHLLQQQQQAHRQTPQPPAVQQQQNEIQRHSPPHMQQQQQQQQQHVMLIDPQQQHHPTTHSPASSVSSSSSSQHPENLVTGGGGGGGGGAGGSVTPNPAVGNTGNGGEELEPPRLSLKQEIITDAEPQQTMEVEQDQSSMHGSSGMVVTPEISGIMNQSQMSDMYQSDASEDSKVGILDGSSIQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRTHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGGGGSSTSAAAAAAAATGGGNVGGGGNTGAPGAPSNVGGSPQMEFKIEPQHNEHSPENTVNYSYY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00098339;
90% Identity: iTF_00092253;
80% Identity: iTF_00092253;