Apur016091.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- -
- Assembly
- GCA_951828415.1
- Location
- OX639994.1:13572973-13575485[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-07 0.00015 23.3 0.0 3 40 17 54 16 59 0.91 2 2 0.77 6.3e+02 2.0 0.0 23 39 477 493 474 498 0.78
Sequence Information
- Coding Sequence
- ATGCCTCgaaattatattctaaaaaaaccACTGCCGTCATACTCATTAGATGACGTTGCCAAGGCAGTCAatgatgtgaaaaataaaaacatgacctTCAGGGCAGCGCAGGAGGCTTATGGAGTACCTGTATCTGTTATTTATAATAGGATAAGTGGCAGGAAAAACTCACTTGAGAAAATTGGACAAGGCCGGGGAAATGCATTGACATTAGAAGTCGAGAAAGAAATTGTTAAGCTCCTCCTCCAACGATCTTCAAGCGGTTATCCTTGCGATAAAGAAGAGTTGCGGGATTTGATTTCCCAGTATGTTATTAATAACAACCTAAAGACCccttttaaaaactcaaaacccGGTGAGGAGTGGTATCGAAACTTTATGAAAAGACATCCTACACTATCCCTTAAGAAACCGGAGCTACTACAGAAATGCCGAAAAGATGCTAGAAAACCTGAAattatttacgatttttataataagttgCATGGGTTAGACGAGGAAAAGTCGAGCTTCGTATTTAATGCTGATGAAAGTGGATTTTGTAGTGATCCTAGCAAGCTGAGGGCAATAGGAGAAAAAGGAGTTACACTAAGTAGGCTTACTGGCGGATCAGGACGTGTATCAACCACGGTTTTGGCATGTGTTTCAGCAGATGGCTTTGCTTTGCcccctttaattatttttaaaggcgCAGCAGTCCAAGCACGATGGACCAATGAAGAAGCGTATCCTGGGACTTTGTATGGAGCTTCGAAGAACGGTTGGATGGAAGAACCACAGTTCTTCCATTGGTTTATCAACGGGTTTATTCCTCATGTTGTACGTCTGagagcagaaaaaaaactttctgaTCAAACTGCTTTGTTACTCTATGATGGGCATTCCAGCCATGTCAGTGTCAGAATAGTGGAAAACGCAATGAAAAACAACATTCAGCTCCTTCGATTCCCAAGTCACTTGACTGATAAAATCCAGCCGTTAGACAAAGCTGTTTTCGGTCCGGTTAAGAGGGCTTGGGACAAATTGTTGGTTAGACATGGAAAAGATATGATAGGCAAAGGTTTGTTCCAACTATCAAAGGCCaactttgttaaattattgGGACAAGTTTGGAGGAGTGCCCTGGTTGCAAACAATATTGTGGCTGGTTTTGTTTCAACTGGAGTCTTTCCGGTTGATGCATCAAAGTTTCCAGAAACAGAATTTAACCAATTGGAACTTAAGAGGTATAAGGAAAATCTTGAAAGAATCCCAGAAGCTAGTGAAAATGTAGAAGTACTAGCACAACCTTTATCTTCAAATGCAGCAGAGTCTCGACAAACTTCCGATCTAAGTACTTTTTCATTACAAGAGGATTTGTTAAATTTCACGGATCTTTCACCGATACCGTCATCCTCCAGAGCTGCTTTATCCGTTCACACTGAAATTGCCAATTTATTCGCAGTTCCTCATAGTTCTCTTAACGCAACtcctaaaagaaaaattactcctCGTTTGAAGCAATTAATATATGGAGAAATATTGACATCTGACGAGGTTTTGCAACGCTTAAAAGAAGCTGAAGAAAAGAAGAGGTTAAAAAGTGAGCCAAAAAAGAAGAGTCTGAAGAAAAAGCAAACAACGAAAAAATCTTTAGCTTCAAAAAAGAAGGTGCTTGTATATTCATCTTCTGAAGACGAAAATCTGAATTACACGCTAGCAGATGATGATTTAGCTGACATAAACTGGGGCGATGAAGGAAACCGAGAAGATCCTGATGAAGTAGAGATGATGAAAGTCAAACCAATTGAAGACCTTGAAGTGGGAGAATTCATTTTAGCATCGTTTAAGGGAGGAAAAAGAAActcgatatattttaaatacgtaTGCCGCATAGAAATGGTACATTTTAGAGATGCAGAAATAAAAGTTCAAGGTCTCGCTGCTCTTATTCCTTCGAACACTATAtttaaagttatagaaaaagatATTAGCTTCATCAAACTATCTCAAGTCGTTGCTATGCTTCCACCGCCAAAGGAGACACTGGATGATAATGGTAACACCATTTACACCTTTGACAAATTTGTCCCAGTCATGGAAATTAACACTTAA
- Protein Sequence
- MPRNYILKKPLPSYSLDDVAKAVNDVKNKNMTFRAAQEAYGVPVSVIYNRISGRKNSLEKIGQGRGNALTLEVEKEIVKLLLQRSSSGYPCDKEELRDLISQYVINNNLKTPFKNSKPGEEWYRNFMKRHPTLSLKKPELLQKCRKDARKPEIIYDFYNKLHGLDEEKSSFVFNADESGFCSDPSKLRAIGEKGVTLSRLTGGSGRVSTTVLACVSADGFALPPLIIFKGAAVQARWTNEEAYPGTLYGASKNGWMEEPQFFHWFINGFIPHVVRLRAEKKLSDQTALLLYDGHSSHVSVRIVENAMKNNIQLLRFPSHLTDKIQPLDKAVFGPVKRAWDKLLVRHGKDMIGKGLFQLSKANFVKLLGQVWRSALVANNIVAGFVSTGVFPVDASKFPETEFNQLELKRYKENLERIPEASENVEVLAQPLSSNAAESRQTSDLSTFSLQEDLLNFTDLSPIPSSSRAALSVHTEIANLFAVPHSSLNATPKRKITPRLKQLIYGEILTSDEVLQRLKEAEEKKRLKSEPKKKSLKKKQTTKKSLASKKKVLVYSSSEDENLNYTLADDDLADINWGDEGNREDPDEVEMMKVKPIEDLEVGEFILASFKGGKRNSIYFKYVCRIEMVHFRDAEIKVQGLAALIPSNTIFKVIEKDISFIKLSQVVAMLPPPKETLDDNGNTIYTFDKFVPVMEINT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00091137; iTF_00091150; iTF_00091140; iTF_00091136;
- 90% Identity
- iTF_00091137;
- 80% Identity
- -