Apur048892.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- lov
- Assembly
- GCA_951828415.1
- Location
- OX639997.1:116489854-116504089[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-17 1.2e-14 55.6 0.0 2 44 90 132 89 133 0.94
Sequence Information
- Coding Sequence
- ATGAAAGTGCAATGCCAAAACGGTGAATTTGTGATGTGTCTGTTGGTTTTCCATGGTTTGACTGGCACGGTGTTCGGCTTGGACTCACCGCTTGGACTCTTTCCGCCCGGCATCGACCCTGGCAAACTCTACAATCCGCTAATGGAAATGTCCGATCCGCGTGGCATGCCCAGCGATCATCCACCGCCCTTTCTGAAAGgcaaaaaaaTACCGCGTCCAAAGGGGCAACACTCAGCGCCACGTGGCGGTCCACCACGCTCGTGGACCAACTCAGAGCTAACCGAAGCGCTGCAACATGTCTGGAATAAAAAGATGACCACCTCGCAGGCGTCACGCATCTTCGGCATTCCCTACAATTCGCTGCTAATGTACGTGCGCGGCAAGTATGGCAAGAGCCTGAAGCTGGAGCAGCTGCGCAAAGACTGTATTAGCGGTCCACCACTTGAACTGCTACAAATCGGACTCGGCGGTGGCTCAACTGGTGGCAAAAACAAGGATAAAAATAAATCGGACAATAGGAATGCAGAAAACTCCGCAAAGAATAATATGGAACTGGATTTGGGCATACCGCTGCCCGGTATGGTGCCCGGTGGCAACGGACCGAATGGACCGCGTAGCGCCAGCTCCGAACCCGATCTGCTTGGCGGTCCTAACTCGCTCTTCGGCCCCTTCCCCGGCGCATTCTATCCCGATTTCGGCGGCGGTTTCCCCGGCCTACCACTGAGCATGCTGAACCTGCTACCACCAACGGATCGTCATCAACCGCCCGGCACTGGCATGACAGCGTTACACCATCTCGGCTTGGATGAAGACTGCAAATCGGACCGCTCAAAACAATCATCCTCACTGGGAGATGACGATTTCGCGACCACTGCCGCAATGAGTGCTGGCATGCAACCGCTCGCACTCAATCGAAACGATAACGAGCGTCGCTCAGTTGGTGGTGAGATGATGGCTGGTACAGCGTCGTTGGGAGCGCCGGCACCACCACCACCCCAAATGAGCGCTGCCGTCGGTGGTGGAGCGCAACAGAATGGCGGAATGCAGGATTGA
- Protein Sequence
- MKVQCQNGEFVMCLLVFHGLTGTVFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMPSDHPPPFLKGKKIPRPKGQHSAPRGGPPRSWTNSELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLELLQIGLGGGSTGGKNKDKNKSDNRNAENSAKNNMELDLGIPLPGMVPGGNGPNGPRSASSEPDLLGGPNSLFGPFPGAFYPDFGGGFPGLPLSMLNLLPPTDRHQPPGTGMTALHHLGLDEDCKSDRSKQSSSLGDDDFATTAAMSAGMQPLALNRNDNERRSVGGEMMAGTASLGAPAPPPPQMSAAVGGGAQQNGGMQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00082845;
- 90% Identity
- iTF_01189309;
- 80% Identity
- -