Aobl026033.1
Basic Information
- Insect
- Anastrepha obliqua
- Gene Symbol
- lov
- Assembly
- GCA_027943255.1
- Location
- JAPTHQ010000169.1:1276863-1291673[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-17 1.5e-13 51.5 0.0 1 44 108 151 108 152 0.95
Sequence Information
- Coding Sequence
- ATGTTAAAACAAAAGCTAAAAGCAAAATCATTTAAAACTTATTCAAAAATTGCTGCAAGCAAAAAGACAAAAGCGCGCACATTTGCGAATTCTCACCACTTCGGCAATGTTACCAATCCAATCCAATTGTTTAGCTTGGATTCACCGCTCGGTCTCTTTCCGCCCGGCATTGACCCTGGCAAACTCTACAATCCGCTAATGGAAATGTCCGATCCGCGTGTCATGCCTGGCGACCATCCACCGCCCTTTCTGAAAGGCAAAAAAATACCACGTCCAAAGGGCCAACACTCGGCGCCACGTGGTGGTCCACCACGCTCATGGACCAACAATGAGCTCACCGATGCCCTGCAGCATGTATGGAACAAGAAGATGACCACCTCGCAGGCATCACGCGTCTTCGGCATTCCCTACAACTCATTGCTAATGTATGTGCGTGGTAAGTATGGCAAAAGCCTGAAGCTGGAACAACTACGCAAAGACTGCATCAGCGGCCCACCAGTTGAAATGCTACAAATCGGTCTCGGTGGTGGCAAAAACAAGGATGAATCACGTAAAGACAAATCAGCTAATAGAAATGCAGAGAACGCTGCAAAAAATAATGCCGAATTAGACTTGGGCATACCACTTCCCGGCATGGTCGCCGGCAGCAACGGACCAAGCGGTCTACGCAGCGCCAGCTCAGAACCGGACTTAATTGGCTGTCCCAACTCGCTGTTCGGTCCCTTCTCCGGCTCTTTCTATCCCGACTTCCCAGGCGGTTTCGCCGGTCTGCCACTGAGCATGCTCAATCTGCTACCACCAACGGATCGACACCAACCGCCCGGCGCCGGTCTTACGCCTTTGCACCATCTAGGGATGGATGAGGATTGCAAATCGGATCGTTCGAAACAATCATCTTCGCTAGGAGATGATGATTTCGCAGCCGGTGCCGCTTTAGCTGCTGGCGTACAACCGCTCGCGCTCAACCGCAACGATAACGAACGCCGCTCTGTTGGTGGTGGTGGGGGTGGTGAAATGCTAGCGAGTGCCGGCTCGATAGGTGCGCCGCCACCGCCACCACCTCCAATGAGCGCTGCCGTCGGTGGCGGTGCGCAGCCAAATGGCGGTATGCAAGATTGA
- Protein Sequence
- MLKQKLKAKSFKTYSKIAASKKTKARTFANSHHFGNVTNPIQLFSLDSPLGLFPPGIDPGKLYNPLMEMSDPRVMPGDHPPPFLKGKKIPRPKGQHSAPRGGPPRSWTNNELTDALQHVWNKKMTTSQASRVFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPVEMLQIGLGGGKNKDESRKDKSANRNAENAAKNNAELDLGIPLPGMVAGSNGPSGLRSASSEPDLIGCPNSLFGPFSGSFYPDFPGGFAGLPLSMLNLLPPTDRHQPPGAGLTPLHHLGMDEDCKSDRSKQSSSLGDDDFAAGAALAAGVQPLALNRNDNERRSVGGGGGGEMLASAGSIGAPPPPPPPMSAAVGGGAQPNGGMQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00192741; iTF_01189309; iTF_00091094;
- 90% Identity
- -
- 80% Identity
- -