Apur036616.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- bab2
- Assembly
- GCA_951828415.1
- Location
- OX639996.1:59484234-59485928[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2e-15 1.8e-12 48.6 0.0 2 44 339 381 338 382 0.95 2 3 0.025 20 6.8 0.0 23 37 407 421 397 427 0.83 3 3 1.9e-17 1.6e-14 55.2 0.0 3 41 449 487 447 489 0.92
Sequence Information
- Coding Sequence
- ATGAATCATTTGAAGTGGATGGGCCATTCGGCAACAATTTTCGATATACAAAGGAATCTTCGCAATGATCCTCAAAGCTGTGAAGTGACGCTGGTGGCTAAAGGTCACTCAGTGCGAGCACATCGGTTTGTTCTCTCATCCTGTTCAGACTTGCTCCGAAATTTGCTGGTGGACATTCCGATGGGACAAGAAGCTACAATTGTTGTACCAGATATTAAAGGTTCGCTATTGGAGAGTGTCTTGGCTTTTATTTACGTTGGCGAAACGAGTCTCACCTCGACCAATTTATCAGAATTCCTGGAAGCTATTAATACCCTCGGCATTAAATCTGCAATAAGTTTTGAGTGCAATAATGCTACATTGACTGGCGCAGTTCCGACAACAACAGTACCAGTGAAATCTTTAGCTAACATACAAATTGCACAAGAGGAGCTAATCGAACAACATGAAAATATAGCCGAAGAAAAAATAGAGaCTGAAAATGTTATTCAACATGAAAGGGAGTTGGAATTTTTGGATGTATATAATGATGCTCAACACAGTAAAATCACCTATTCTATTGAACACATGCCGGTAGCCAGCACTGCAAATGAATATATATTAACAGAAAATTCCGGCACATTTACATTGACTCAAAATAACAAACTCGAAAATGCGTCCACCTCGGATTCAGAAAAGTTGGTGGAAATGGAAGATACCACGGATGATGGCCATATTATTGAAGAGTACAGCAGTAATAGCACCGATCCTATAATTGAGATTGCTGCAAACACTGCATCCACAAGCACTCCTAAAGCAACTGCCAATACAACAAATTCCCAAGTGCCACAGCcacttattcaaattaaaacatctccaaaaattaaaacaattaaaattaagtctCAAACCAGTTCAGAAACTGACCAAATGCATCAATCAATGTTTACGGCAATTGACCCAACTGCAGATCCAATTTCAGTATTAAAGACTGAGGATACTTATGGTACACTTAATGCTGCACCAGGTACCCCGGAAGATGCTCTATTTTATGCCGTTCAAGCAGTAATAAATGAAGGTATGAGTTTGCAAAAAGCCGCACAAAAATATGATCTTTCGAAAACAGTCCTTTGGCGGAGAGTACGCAAACATCCAAACTATATGAAAACAGCTCGAGAAAATCCAGTTCTTACCATGGCATATGAACGATTAAAAGGTGGTgattcgttaaaaaatattagtcgTGAATTAGATATACCAATGTCAACGCTACATCGACATAAAGTTCGTTTAGCGCAGCAGGGGCGACTACCGGACTATGTCTCTTTTAAGAAACGTGATGTAAACTCAAAGATTGAGTTAAAAGATAAACTAACAAAAGCTTTGCACGCATGCGTACATGAAGGAATGTCACAGAATCATGCAGCAAATCTATACGATATACCGAAAAGCACTCTTTGGCGGCATTTGCAAAAACGAGTAGCTGAAGCTGAGCTTTCCCAAAAACTCGAACAGGAGCACATTAAAGAGGAAGTAATATTATCTTAA
- Protein Sequence
- MNHLKWMGHSATIFDIQRNLRNDPQSCEVTLVAKGHSVRAHRFVLSSCSDLLRNLLVDIPMGQEATIVVPDIKGSLLESVLAFIYVGETSLTSTNLSEFLEAINTLGIKSAISFECNNATLTGAVPTTTVPVKSLANIQIAQEELIEQHENIAEEKIETENVIQHERELEFLDVYNDAQHSKITYSIEHMPVASTANEYILTENSGTFTLTQNNKLENASTSDSEKLVEMEDTTDDGHIIEEYSSNSTDPIIEIAANTASTSTPKATANTTNSQVPQPLIQIKTSPKIKTIKIKSQTSSETDQMHQSMFTAIDPTADPISVLKTEDTYGTLNAAPGTPEDALFYAVQAVINEGMSLQKAAQKYDLSKTVLWRRVRKHPNYMKTARENPVLTMAYERLKGGDSLKNISRELDIPMSTLHRHKVRLAQQGRLPDYVSFKKRDVNSKIELKDKLTKALHACVHEGMSQNHAANLYDIPKSTLWRHLQKRVAEAELSQKLEQEHIKEEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01357850;
- 90% Identity
- iTF_00303738;
- 80% Identity
- iTF_00091444;