Apur043704.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- retn
- Assembly
- GCA_951828415.1
- Location
- OX639997.1:51343695-51383554[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-26 1.9e-22 81.3 0.0 2 89 23 108 22 108 0.96 2 2 2.2 1.9e+04 -2.0 0.0 44 76 137 173 134 184 0.60
Sequence Information
- Coding Sequence
- ATGAGCGTCATATTGGCTGCGATTGCGGCTGCCGGAGAGCTTTACGAGATCAACGATGATCCGAAGCGGAAAGAATTTCTGGATGACTTGTTTTCGTTTATGCAAAAAAGAGGCACACCCATCAACCGCTTACCAATAATGGCGAAATCGGTTTTGGATTTATATGAGTTATATAATTTGGTAATAGCGCGTGGCGGTCTAGTTGATGTTATCAATAAGAAATTATGGCAGGAAATCATAAAAGGACTACATTTGCCCTCGAGCATAACAAGTGCTGCATTCACGCTGAGAACACAATACATGAAGTATCTCTACCCCTATGAATGCGATAAGCAGAATTTGAGCTCACCCGCTGAACTGCAAGCGGCCATCGATGGCAATCGTCGCGAAGGTCGCCGCTCCAGTTATGGCCAATACGAGGCTATGCATAATCAATTGCAATTGCCGCAAATCGGCCGTCAGACGATGCCGACAGGCATACAACAAATGTCGCCACTGGCGACACAAGCAGCGGCTGCCGCTGCCGCCGCACACCACAGATTGATGGCGCCTGCCTTTGGACAGATGCCGAATTTGGTGACACATGAAATCGAGCAGCGTATGATGGAATATCTGAAGCTAATACAGGTGAAAAAGGAGCAGCAGAGTAGCGCTGCCGCAGCGGCTGCATTAGCGGCGGCGGCGGCCGCTGGCGGCAATGCAGCGGGTGTTGGCGTGGGCGATGCGACGGCTGTGACAGCGGGACGTGTCGGTGTGGGTGGCGCAAGTGGTGGCAGTGCCGCACACATAAAGCAACAGGAGCGCCACCATTCACAGAGTCCAGAGATGACAACACGCGAGGCGATGAATGCATTTGAGATGTCACGTGTTGCTTTTTGGCAGATGTATCACAACAATACCAGCCCGCCAACGTCAATGAATGCCTCGCCGCAGGGTAGTGTAGGCGGTGTGGGCAgcattggtggtggtggtggtagtggCGGTATCGGAGCACTTGGCGGCGCGGCGGGTCTAAGCGAGCAGCACAGCGAGGCTTTGAATCTTTCCGATTCTCCACCCAATCTCCCCAACATCAAACGGGAACGTGAATGCGAACAATCAATAGATGCTTGCGACCGTGATGATTTCCAAAATCAACCACCTCCAGCGAAACGTGGTCCTCTGAACTTTCCAACCGGCTTTTATCTACCACACAGCATGGCTgccgcagcagcagcggcagctgCCAATTTTCATcaacacaacagcaacaatctGCCACAGGACTCTGACCCCGAAGATAATGACGAGGATGGCGATGCACACAATAGCACCGGCAACTCATTGACGCGCGGCGAGGAGAACGACCGACCAGCATCGCTAAATGGCCATCATCATTTGCCACACAATCTGCACCTGCCACATCATCAGCACCTCGACAACAATACGAGCGGCAATCATGATAAGTCTGATGATTCGGCCATCGAAAATTCGCCTTCGACGAGTGCAGCGTCGGCTGGTGGCAGTGGTGGTGGCAGCAATGCGGGCGGTATTGACAGCGGTAATGGTGCCGAGGGTGTGAGTAGCGGTCACATCTCACCGGTATCCACAAAGAAGATACACTTGTCGAAACAACAAAATAGCAGTAGCACATCAGCGTTGGACTGCAGTAGCGGTGGGGGGCGTGCGCCTTCGACAAGTCCGGGATTGGGTGGTGTAGAGGATGCACTGAATCTCCTATCGGGCATGCAATTCCGTGTAACGCGAAATGGCACCAATGCAAATGGCGAACCACAGCTGACTGTGAACCTCGAGTTGAATGGCATTAAATATTCGGGTCTGCTGATAGCCAACACAACCGATAGTGAttccaaataa
- Protein Sequence
- MSVILAAIAAAGELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDKQNLSSPAELQAAIDGNRREGRRSSYGQYEAMHNQLQLPQIGRQTMPTGIQQMSPLATQAAAAAAAAHHRLMAPAFGQMPNLVTHEIEQRMMEYLKLIQVKKEQQSSAAAAAALAAAAAAGGNAAGVGVGDATAVTAGRVGVGGASGGSAAHIKQQERHHSQSPEMTTREAMNAFEMSRVAFWQMYHNNTSPPTSMNASPQGSVGGVGSIGGGGGSGGIGALGGAAGLSEQHSEALNLSDSPPNLPNIKRERECEQSIDACDRDDFQNQPPPAKRGPLNFPTGFYLPHSMAAAAAAAAANFHQHNSNNLPQDSDPEDNDEDGDAHNSTGNSLTRGEENDRPASLNGHHHLPHNLHLPHHQHLDNNTSGNHDKSDDSAIENSPSTSAASAGGSGGGSNAGGIDSGNGAEGVSSGHISPVSTKKIHLSKQQNSSSTSALDCSSGGGRAPSTSPGLGGVEDALNLLSGMQFRVTRNGTNANGEPQLTVNLELNGIKYSGLLIANTTDSDSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01189163;
- 90% Identity
- -
- 80% Identity
- -