Basic Information

Transcription Factor Domain

TF Family: PC4
Domain: PC4 domain
PFAM: PF02229
TF Group: Unclassified Structure
Description: This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-09 3.5e-05 25.1 0.1 2 46 20 65 19 67 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-09	3.5e-05	25.1	0.1	2	46	20	65	19	67	0.88

Coding Sequence: atggtaaaagaattttcatatgaaattgtTGAAGAAATTGCTGTCTTAAGTGAAAATCCTAAAGGTTGGCGCAAGGAATTAAATTTGGTTAGTTGGAATGGACGTCCACCTAAATTTGATATTAGAGACTGGGCACCAGAGCATGAGAAGTATGGAATAATGAAGAAATCGGTCGAGATGACGCTCGAAGCAATGAACCGATCTCTCAATGCTGACGTCGAAATGATGGATCAGGAAGAGAGTCCCAAAAAGCCGAATGCCATGAACAACTCGATGAATGCTCTCTACAGTTCTACCCCGAAAAAGGACGCCGATTCCGAGGATAAGAAGGCGGCAAAGAGCGCGAAAAAGGTGTCGAAAATGCCGCTGACGGAGGAGGAGAAGGCAGAGAAAGCGATCGAAGCCAGTCTGGCTAAGCAGAAAGACAATAAGGATGGTCGAAGGGGCAGTTATGGCAGTGAAAAATCGCCCAAAGACGAGGATTACGACTCTGCCGGCTCTCCTAAGCTCGGCGCAAACATTCCGCCGGACACGAAGAAGATCATCGAAAAGCTTGCGGAATCGGTCGCCAAAAACGGTGATAAATTTGAGGCTTCGATTCACGCACTGCACAACACCAAGTTCGCCTTTCTCTCGCCCACTCACGATTATCATCTCTACTATATCGAACGAAAGATTCATCATTTCAAGGTGGTCAAACTGCAGGAACTACGGGAAAAGATTTCCAAGACTACCGGAAAATAA
Protein Sequence: MVKEFSYEIVEEIAVLSENPKGWRKELNLVSWNGRPPKFDIRDWAPEHEKYGIMKKSVEMTLEAMNRSLNADVEMMDQEESPKKPNAMNNSMNALYSSTPKKDADSEDKKAAKSAKKVSKMPLTEEEKAEKAIEASLAKQKDNKDGRRGSYGSEKSPKDEDYDSAGSPKLGANIPPDTKKIIEKLAESVAKNGDKFEASIHALHNTKFAFLSPTHDYHLYYIERKIHHFKVVKLQELREKISKTTGK

Sequence clustering based on sequence similarity using MMseqs2