Basic Information

Insect: Andrena praecox
Gene Symbol: -
Assembly: GCA_963932275.1
Location: OZ010731.1:8014268-8020193[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.6e-06 0.00038 21.8 1.7 1 23 276 298 276 298 0.98

2 9 2.5e-08 3.7e-06 28.1 1.6 3 23 306 326 304 326 0.98

3 9 0.00019 0.028 15.9 0.4 1 23 332 354 332 354 0.98

4 9 1.1e-06 0.00016 23.0 1.5 1 23 360 382 360 382 0.99

5 9 1.9e-05 0.0028 19.1 1.7 2 23 494 515 493 515 0.96

6 9 2.4e-09 3.5e-07 31.3 1.6 1 23 521 543 521 543 0.98

7 9 0.00055 0.08 14.5 0.6 3 23 551 571 549 571 0.97

8 9 7.3e-05 0.011 17.2 1.4 1 23 577 599 577 599 0.99

9 9 0.016 2.4 9.8 0.8 1 23 605 629 605 629 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.6e-06	0.00038	21.8	1.7	1	23	276	298	276	298	0.98
2	9	2.5e-08	3.7e-06	28.1	1.6	3	23	306	326	304	326	0.98
3	9	0.00019	0.028	15.9	0.4	1	23	332	354	332	354	0.98
4	9	1.1e-06	0.00016	23.0	1.5	1	23	360	382	360	382	0.99
5	9	1.9e-05	0.0028	19.1	1.7	2	23	494	515	493	515	0.96
6	9	2.4e-09	3.5e-07	31.3	1.6	1	23	521	543	521	543	0.98
7	9	0.00055	0.08	14.5	0.6	3	23	551	571	549	571	0.97
8	9	7.3e-05	0.011	17.2	1.4	1	23	577	599	577	599	0.99
9	9	0.016	2.4	9.8	0.8	1	23	605	629	605	629	0.95

Sequence Information

Coding Sequence: ATGTCTATCATGCTTCCTGTGCCTTCTGACGTGGCTTATAATACTGGCGCGCCCTACGTATTATACAAGGACAACATGGAGAGACCCCAGGGGCAATGGGGCCCGGGGCCGGGATCTCTCCAGGACGGGGGACTGTATccgcagcaacagcagcaacagcaacagcagggCTCCTCCTCGTCCGGCAGTCCACAGCAGGCCTGTGGTCCCCCTGTCGAGGGAGAAAGCGGTCCCCCGCCTTCGTTGGCCTCTCCCGTGCCCTCGCCGTACCCCTCGGCACCGCCCGAGCCTCAAGCCTTAACCCCACCTGACGACGATATACAATCGAATCAAGCCACCTctcagcagcagcaacagcagcaacagcaacagacGCAGGCGCAAgtgcagcagcaacaacaacaacagcagcaacagcagcaggtccaacaacagcagcaacagcaacagcagcaacaacagcagaCGCAACAGCAGGATCATTCGCCGCAACAGCAACTGACGCCGCACGAGGTGGATCGCAGCGATTGCTTCCCAGGTGCCGGGGAGCTGCAGCAGTACCCGCAGCACTACTTCAAGGAAGCCAGGCCGCATCCATCGCCGTCGGTGCCGCCTCACATGCTCACGCCAGGCGGCTTCTCGGCGCTGCACTACCTGAAGCAGCCCGGCGTGATGCTGACGTCCCTGGGCCAGGGGGACGGCGGGCCGAGTTTGGACGGCCACCAATACGCCAGCCCCGGCGCGCCGAACATGGGGACAGGTCTGCCGGACATCGTCCAGCAGAGCGGCAAGCCGTCGAAGGGGGCGAACAGCGATCTACGATTGTTCAAGTGTCTCACGTGCGGGAAAGATTTTAAGCAGAAGTCGACGCTGCTGCAACACGAGCGGATCCACACGGACAGTCGGCCGTACGGGTGTCCGGAGTGCGGGAAGCGGTTCAGGCAACAATCGCATCTAACGCAGCACCTGCGCATACACGCGAACGAGAAGCCGTATGCTTGCGTGTACTGCGAGCGTACGTTCCGGCAGCGCGCGATCCTCAACCAGCATCTGCGCATCCACTCGGGTGAGAAGCCATACCAATGTCCGGAGTGCGGAAAACACTTCCGTCAGAAGGCGATCCTGAATCAGCACGTCCGCACACACCAAGACGTGAGCCCGCATCTGATCTTCAAGAACGGGATGACCCCGACACTCTGGCCGCAGGACGTTCCGTACCCCCCGGAGGAGGGCAAGGAGGAGGTGGCGTCCACGTTCGGCGACACGGACACCCAGTCGGGCGCGTTCAGCCCGGCGCCGGACGCCAACTCCATCCAGTATCCTGCCTACTTCAAGGACCCGAAGGGCCACACGGTGTTCGGGGCCGGCGGCACCGGCAGCTTCGGCGCCCTGCAGTACATCAAGCAACAGGGCGGTAGCAAGAGCTGTCTGCCGGACGTGATACAGCACGGGCGCTCCGCGGGGATGCCCCTGTACGTGCGCTGCCCGATCTGTCAGAAGGAGTTCAAGCAGAAGTCGACGCTGCTGCAGCACGGCTGCATACACATCGAGTCCCGGCCGTATCCCTGCCCGGAGTGCGGCAAGAGGTTCAGGCAGCAGTCCCACCTCACCCAGCACCTACGCATCCACACGAACGAAAAGCCGTACGGCTGCGTCTACTGCGGCCGTAACTTCCGCCAGCGCACAATACTGAACCAGCATCTGCGCATCCACACCGGCGAGAAGCCGTACAAGTGCCAGCAGTGCGGCAAGGACTTCCGTCAGAAGGCGATCCTGGACCAGCACACGCGCACCCACCAGGGCGACCGGCCGTTCTGCTGCCCCATGCCCAACTGCAGGCGGCGCTTCGCCACCGAGCCCGAGGTGAAGAAGCACATCGACAACCACATGAACCCGCACGCGGCCAAGGTGCGTAGGAACTCGAGCAGCGACACGAAGCCGCCCGGCACGCCGGCCGGCCTGGGCCCGGTGCCAGTACCGCGGGGCCTCACGCCCACGGTGGTAAAGCCGGAGCTGTACTTCCCGCAATGCTACGCGCCGGCGTTCAATCATCAGCCGCCAGTGTCGACGGCGCAGTTCCCCGGCCAGGCGAACGGCGTGTCCGTCGCCGGCGAGTTCAAGCCACCGACCGGTCTGCCGCCACAGTGA
Protein Sequence: MSIMLPVPSDVAYNTGAPYVLYKDNMERPQGQWGPGPGSLQDGGLYPQQQQQQQQQGSSSSGSPQQACGPPVEGESGPPPSLASPVPSPYPSAPPEPQALTPPDDDIQSNQATSQQQQQQQQQQTQAQVQQQQQQQQQQQQVQQQQQQQQQQQQQTQQQDHSPQQQLTPHEVDRSDCFPGAGELQQYPQHYFKEARPHPSPSVPPHMLTPGGFSALHYLKQPGVMLTSLGQGDGGPSLDGHQYASPGAPNMGTGLPDIVQQSGKPSKGANSDLRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCERTFRQRAILNQHLRIHSGEKPYQCPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGMTPTLWPQDVPYPPEEGKEEVASTFGDTDTQSGAFSPAPDANSIQYPAYFKDPKGHTVFGAGGTGSFGALQYIKQQGGSKSCLPDVIQHGRSAGMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCGRNFRQRTILNQHLRIHTGEKPYKCQQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKVRRNSSSDTKPPGTPAGLGPVPVPRGLTPTVVKPELYFPQCYAPAFNHQPPVSTAQFPGQANGVSVAGEFKPPTGLPPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00214532;
90% Identity: iTF_00684322;
80% Identity: -