Basic Information

Insect: Andrena praecox
Gene Symbol: -
Assembly: GCA_963932275.1
Location: OZ010728.1:68304607-68314759[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.7e-05 0.0083 17.6 1.4 1 23 431 453 431 453 0.96

2 18 0.0034 0.5 12.0 1.6 1 20 459 478 459 481 0.94

3 18 1.4e-05 0.0021 19.5 1.4 1 23 487 509 487 509 0.98

4 18 8.3e-05 0.012 17.1 4.4 1 21 515 535 515 537 0.95

5 18 1.1e-05 0.0016 19.8 5.6 1 23 543 565 543 565 0.99

6 18 2.6e-05 0.0037 18.7 5.3 1 23 571 593 571 593 0.97

7 18 9.7e-05 0.014 16.8 6.9 1 23 599 621 599 621 0.96

8 18 9.5e-08 1.4e-05 26.3 2.7 1 23 627 649 627 649 0.98

9 18 7e-05 0.01 17.3 6.7 1 23 655 677 655 677 0.97

10 18 2.2e-05 0.0032 18.9 5.8 1 23 683 705 683 705 0.98

11 18 5.8e-07 8.4e-05 23.8 2.9 1 23 711 733 711 733 0.98

12 18 8.6e-06 0.0013 20.2 7.8 1 23 739 761 739 761 0.98

13 18 2.7e-05 0.0039 18.6 9.1 1 23 767 789 767 789 0.98

14 18 3.6e-05 0.0052 18.2 7.5 1 23 795 817 795 817 0.98

15 18 0.0017 0.25 12.9 8.8 1 21 823 843 823 845 0.94

16 18 1.3e-05 0.0019 19.6 0.4 1 23 851 873 851 873 0.98

17 18 0.031 4.5 9.0 4.5 1 23 883 905 883 905 0.98

18 18 5e-07 7.3e-05 24.0 1.3 1 23 911 933 911 933 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.7e-05	0.0083	17.6	1.4	1	23	431	453	431	453	0.96
2	18	0.0034	0.5	12.0	1.6	1	20	459	478	459	481	0.94
3	18	1.4e-05	0.0021	19.5	1.4	1	23	487	509	487	509	0.98
4	18	8.3e-05	0.012	17.1	4.4	1	21	515	535	515	537	0.95
5	18	1.1e-05	0.0016	19.8	5.6	1	23	543	565	543	565	0.99
6	18	2.6e-05	0.0037	18.7	5.3	1	23	571	593	571	593	0.97
7	18	9.7e-05	0.014	16.8	6.9	1	23	599	621	599	621	0.96
8	18	9.5e-08	1.4e-05	26.3	2.7	1	23	627	649	627	649	0.98
9	18	7e-05	0.01	17.3	6.7	1	23	655	677	655	677	0.97
10	18	2.2e-05	0.0032	18.9	5.8	1	23	683	705	683	705	0.98
11	18	5.8e-07	8.4e-05	23.8	2.9	1	23	711	733	711	733	0.98
12	18	8.6e-06	0.0013	20.2	7.8	1	23	739	761	739	761	0.98
13	18	2.7e-05	0.0039	18.6	9.1	1	23	767	789	767	789	0.98
14	18	3.6e-05	0.0052	18.2	7.5	1	23	795	817	795	817	0.98
15	18	0.0017	0.25	12.9	8.8	1	21	823	843	823	845	0.94
16	18	1.3e-05	0.0019	19.6	0.4	1	23	851	873	851	873	0.98
17	18	0.031	4.5	9.0	4.5	1	23	883	905	883	905	0.98
18	18	5e-07	7.3e-05	24.0	1.3	1	23	911	933	911	933	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCATTGCCAGCGACTACGCAGGCACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCGTACCCAGGTGGTTTGACTGCCGCGACCAGTCTTGGCAATGTAGCGAGTACCCCGCATTCATCCGCGGACCTGCGTGTCTCGGTCTATCACCATTCCCACCACAACTCCTCGCACAGGAGTAGTGGAGGTGGAGAGGCGTCTTCCAAAGAGCCGGCCTCTTCATTGAACCAAGAAATGGCGTTGACTTCCAGCTCGCACCATCAGTCGACGCCTGCGCATCATCATCATCAACCTTCGGTTAGCAGTAGCAGCCATCATAGCTCTTTACAACCAAATCCGCAGCAGATCCCAGTGTCGCTGCCAGGCCTTAATCTAGACGGAGCGCATTTACCTGCGAGCGTTAGTCATCTGCAGGCTGCACATGCACAAATGCAGCAACAAATGCAGGCTCAACAGCAACAGCTGCATCAGCAGCAACAGCCGCAGCcccaacagcaacagcagcagcagcagcagcagcaatctCACCATCAGATGCAAAATCATCAAAATGCTCAGAACAATGGACCAACTGCACATAATCAAAACGCACAGAGAGACGATAATAAAGTGAAAGATGAGGGTGGAAGTTGCACAACCGAACGTTGTAGCGACAATCAAGTTCATTGCCAAGTCCAGTGTGATCTCCAGCTACAAACATCTCAAGATCTACAACAAAGTCTTatgcaacagcaacagcagcagcagcaacagcaacaacagcagcagcagcagcagcaacaacaaatTGGTGTGAATATAAGTGGAAATTCTTCGGCCGAAGGTGGAAGTCAGAACAATTCGGAGAAGCCTGAAAAAGAAAAAGAGCTGCGCCAACTGAACATGACGCAGTTCCAAGTGCCAGATTTAAAACCAGGAGGTCATATGATGGATGTGAGAACAGCCGACGGTTCAGTTGTAAAAATCAGTGCTGGGAATGAACAAGATTTAGCGAAAACTCTTGGGGTTGAAATGGTGCAAAATATGTATAAGGTGAATGTCGAAGATATTAATCAGCTTCTAGCATATCATGAAGTATTTGGGAAGCTACAAAGCGACATAGCTGCCGGTACAAGCTTAGTTGGAAGCACAGTTCCTACTCAAACAGTTACCACGATACAGAATGGAACGCCGATTGTACAGCAAGTTCAATTAAATAAGTTCGATATTAAGTCGAGTGACGGTGAAGCTACACCAGGACCAAGCGCATCGCCAGTATCGGTTGGAAGCCATGCTTGTGAAATATGTGGAAAGATTTTTCAGTTTCGCTATCAGCTTATCGTGCACCGTCGATATCATACGGAAAGAAAACCATTTACATGTCAAGTGTGTGGCAAGGCATTTTTAAATGCGAACGATTTGACTCGCCATGGTAAATGTCACTTAGGTGGATCCATGTTTACTTGTACAGTGTGTTTTCATGTGTTTGCCAATGCACCGTCGTTAGAGCGCCATATGAAGCGACATGCTACCGATAAACCTTACAATTGTACCGTATGCGGAAAGAGTTTCGCGAGAAAGGAACATTTGGATAATCATACTCGCTGCCATACTGGGGAAACACCCTACAGGTGCCAGTACTGTTCGAAAACATTTACTAGGAAAGAACATATGGTGAATCATGTTCGCAAACACACGGGTGAAACGCCCCATCGATGTGATATTTGCAAAAAGAGCTTTACTCGCAAAGAACATTTTATGAATCATGTTATGTGGCACACAGGAGAGACTCCTCACCATTGTCAAGCATGCGGCAAGAAGTATACGCGTAAAGAACATCTTGCAAACCATATGCGTTCGCACACCAACGACACACCATTTCGCTGTGAAATATGCGGTAAGTCGTTTACGAGAAAGGAGCACTTCACGAACCACATAATGTGGCACACGGGTGAGACGCCGCACCGCTGTGATTTCTGCTCGAAGACATTCACGCGAAAGGAGCATCTTTTGAACCACGTCCGCCAGCACACGGGTGAGTCTCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGGGAGACGCCCTTCCGCTGTCAGTACTGTCCAAAAGCATTTACGCGGAAGGATCACCTGGTAAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGAGGAAGGAACATTTGACAAATCACGTGCGTCAACATACAGGCGAATCGCCACACCGATGCCACTTCTGCTCCAAGTCATTTACTCGTAAGGAGCATTTGACGAATCATGTGCGAATCCACACCGGCGAATCACCGCACAGGTGTGAGTTTTGTCAGAGGACGTTCACTAGGAAAGAACACCTTAATAATCATCTCCGCCAACATACCGGAGATTCGTCGCACTGTTGTAACGTCTGTTCAAAGCCGTTTACAAGAAAGGAGCATCTTGTAAATCATATGCGATGTCATACTGGTGAACGTCCATTCGTATGCACAGAATGTGGCAAGAGCTTCCCGTTGAAGGGCAATCTACTTTTCCATATGCGCTCGCACAATAAAGGAAGTAACGCCGAGAGGCCGTTCCGTTGCGACCTATGTCCTAAAGACTTCATGTGCAAAGGGCACTTGGTGTCCCACAGACGATCACATTCGGACGAACGGCCCCACAGCTGCCCGGATTGCGGGAAAACGTTCGTCGAGAAAGGCAACATGTTGAGACATTTAAGGAAGCACGCGGCAGAAGGGCCACCGACACAAGTCACCACGCCATCAGCCATTCCTCAATCCGGCGTTCTGCCGATACCGGCTGCAGCGGTTCTGGTTGGTCATCCGTTGGCACCGCCGGCACCACCAGTAGTGCCACAACACACGGTTGTCGTGCCCACCCCGCCAGGTGTGTTGACCTCCTACTAA
Protein Sequence: MNSEQHALPATTQAQEDVNAGQSGRPSYPGGLTAATSLGNVASTPHSSADLRVSVYHHSHHNSSHRSSGGGEASSKEPASSLNQEMALTSSSHHQSTPAHHHHQPSVSSSSHHSSLQPNPQQIPVSLPGLNLDGAHLPASVSHLQAAHAQMQQQMQAQQQQLHQQQQPQPQQQQQQQQQQQSHHQMQNHQNAQNNGPTAHNQNAQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQTSQDLQQSLMQQQQQQQQQQQQQQQQQQQQIGVNISGNSSAEGGSQNNSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSDIAAGTSLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFLNANDLTRHGKCHLGGSMFTCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQACGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVTTPSAIPQSGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00625640;
80% Identity: -