Amar002035.2
Basic Information
- Insect
- Andrena marginata
- Gene Symbol
- FOXP1
- Assembly
- GCA_963932335.1
- Location
- OZ010659.1:24351764-24373811[-]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 2.5e+03 -1.1 0.3 22 50 170 198 159 220 0.77 2 2 9.6e-27 8.8e-24 83.7 0.2 2 82 613 687 612 692 0.94
Sequence Information
- Coding Sequence
- ATGTTTGATATGGAATGCGAGAAAAAGCTAGAAGCCCTgaagcagcagcaacagcaacccCGGGACAGTGTTCCCTCGTCGAGGGAGCGCGAGAATCGAGAGAGAGATCGACTGTCGGTCCGTAGCCGTGAGAACAGCAGGGGCAACGAGCTAGGTGGCGGCGTGACCGaccagcaacaacaacaacagcaacaggaCCTGACGATACAGTACCAGAGCAATGGGAAGCTCAGTCCCGCTGGGCACGCAGTGACAGCAGCACCCATGACCCAGCAAAAGCAGCCTATCATCACGCAGCAATCGCAACAGCCGAGCTCGGGGGCGCCTGGTCCCCAACCGAGTCCTCATCAGAGCCCACAGGCCCCTCAGAGGGGTTCACCGCCGAATCCTTCGCAGGGTCCTCCTCCTGGAGGGCCGCCAGGGGCACCACCCTCTCAGAATCCCTCTCAGATGATGCTCAGCCCGGCGAGCGGCATCCATCAGATGCAACAGCTGCTCCAGCAACACATACTCAGCCCCACGCAACTGCAGTCATTCATGCAGCAGCACACGCTCTACttgcagcaacaacagcagcaacatcATCAGGACTCCTCCTCGGAGCATGCGTCGAACCAGGAGCGATTCGGCTACTTTTCGTCTCTAAAGGATCACCAGCACCAGTTCGCCGAGCTGGGCAGGAAGAAGCTGGAGCAGGCGATACAGCAACTGCAGGAACAGTTGCAGCTGAACGTTATCCAGCAGACCCATCTGCTGCAAACGGCTGACAAGAAGAAGGCGTCCGCGCCGCTCCAGCAATTGGCTCTTCAACAGCAACGCCTCGTCCAGCAGTTGCAGATCACGCAGAGCCAGTATCTCCTGCAGCAAGGTCTGGGTCTTCAAGGACACAATTCCTCTTCAGGTCTGCAACCAGGAGAAGTCCTGCCAATATGGAAGTCAGAGACCCCCGATGGCCCAGAATCCCATCAGAATTCCAACGTTCCGAAATCTGGGACTGGACTGAACGGACTTCTGAATTCGACAGTGTCGAGTCGGCGGTCAGAGATGAACGGCACCACTTCACTGGACGAGAAACCGTTGGACATTTCCTCGAACGACAAGGCTCACCCCCTCTACGGACATGGGGTTTGCAAGTGGCCAGGCTGTGAAGTTATTTGTGAAGACTATCAAGCATTCCTTAAGCACTTAAACACGGAGCACACGCTGGACGACCGATCGACGGCGCAGGCCAGAGTACAGATGCAAGTGGTCTCTCAGCTGGAGATACAGTTGCAGAAGGAACGGGACCGGTTGACAGCCATGATGCACCATCTACACGTGGCGAAGCAAATGGCCTCCCCGGAACCGCCCAAGTCGTCCGAGTCATCAACGGGCTCGAGTATACCAAAGCTGAATCTCTCCACCGCCCTGATGAACCAGCCACCCCCGAATTTCGGCGTCTCCCAGGTGTCTCCTGTCTCGATGTCCGCCCTGGTGTCAGCTGTGAGGTCGCCTGCAGGCGGGCAATTGCCACCATCGGCGGGCGGCGCGCCCATGCCACCAATTCCCAACATGTCCAACATGTCCGGGATGCCTCCGCTGCCAAACATGCCGGGTAGCATGCCCACGATGGCAACCATGCCCAGTATGGCGGGGCCCATCAGGCGGCGTATCAGCGACAAGTCGCTCTCGTTGTCAGGAGGACTGTATGACGAGGGCATTGTAAGGCGCAGAGTAGCCGTCGATAGATCTGGAGTAGATATTAACGAAGGGCTGCCCTACATGCTGGAGCGTGCTGGCCTTGACGTCCAACAAGAGATCCAACGAAATAGGGAGTTTTACAAGAACGCCGACGTCAGACCGCCGTTCACGTACGCGTCTTTAATACGGCAGTCCATCATCGAGTCCCCGGAGAAGCAACTGACGCTGAACGAGATCTACAATTGGTTCCAGAACACGTTCTGCTACTTCCGGCGCAACGCTGCCACGTGGAAGAACGCGATCCGCACCAATCTATCATTGCACAAGTGTTTTGTGCGCTATGAGGACGACTTCGGGTCATTCTGGATGGTGGACGACGCCGAGTTCGTAAAGCGGCGGCATCTGTCCCGCGGCCGCCCCAGGAAATATGACCCAACCCCATCACCCACTCCACCCCACCTCTCCGCACAGGGTGTCCCGTCGAAGAGTCCAACCCAGATGCACAGCCCCACCATGTACGGTGACGCGTTGAACGCCAATCTCCAGTATTTCCAGGCGGCGCTCGGGGACTCTAACATGGGATTTCTCAACAACACGATGTgcacgtcgacgacgacgagtCCTGACAAGGAGCACGTGATGGCCCATAACGATTTAATGTCACCGTTGGATGAACCAGCGGTGCACATAAAGCAGGAGGGCCAGAGCCCAGAAGGCGGCAAGCTGACGAGATTAATAAAGCGGGAGCTGGTGGACGCGCCAGCGGAGCAGGAGGGCGAGGACGATCAGGTGGACGAGAGGGAGTATCCCGAAAGTCACGGGCACGACTCAGGCCAGGACGAGGACATGGCCGAGGATCTGTCGATGGCGCCGGACATAATGACCCCCGAGGATCAGATCGAGGCGTAG
- Protein Sequence
- MFDMECEKKLEALKQQQQQPRDSVPSSRERENRERDRLSVRSRENSRGNELGGGVTDQQQQQQQQDLTIQYQSNGKLSPAGHAVTAAPMTQQKQPIITQQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMLSPASGIHQMQQLLQQHILSPTQLQSFMQQHTLYLQQQQQQHHQDSSSEHASNQERFGYFSSLKDHQHQFAELGRKKLEQAIQQLQEQLQLNVIQQTHLLQTADKKKASAPLQQLALQQQRLVQQLQITQSQYLLQQGLGLQGHNSSSGLQPGEVLPIWKSETPDGPESHQNSNVPKSGTGLNGLLNSTVSSRRSEMNGTTSLDEKPLDISSNDKAHPLYGHGVCKWPGCEVICEDYQAFLKHLNTEHTLDDRSTAQARVQMQVVSQLEIQLQKERDRLTAMMHHLHVAKQMASPEPPKSSESSTGSSIPKLNLSTALMNQPPPNFGVSQVSPVSMSALVSAVRSPAGGQLPPSAGGAPMPPIPNMSNMSGMPPLPNMPGSMPTMATMPSMAGPIRRRISDKSLSLSGGLYDEGIVRRRVAVDRSGVDINEGLPYMLERAGLDVQQEIQRNREFYKNADVRPPFTYASLIRQSIIESPEKQLTLNEIYNWFQNTFCYFRRNAATWKNAIRTNLSLHKCFVRYEDDFGSFWMVDDAEFVKRRHLSRGRPRKYDPTPSPTPPHLSAQGVPSKSPTQMHSPTMYGDALNANLQYFQAALGDSNMGFLNNTMCTSTTTSPDKEHVMAHNDLMSPLDEPAVHIKQEGQSPEGGKLTRLIKRELVDAPAEQEGEDDQVDEREYPESHGHDSGQDEDMAEDLSMAPDIMTPEDQIEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00217574;
- 90% Identity
- iTF_00222355;
- 80% Identity
- -