Basic Information

Insect: Andrena camellia
Gene Symbol: RREB1
Assembly: GCA_029448645.1
Location: CM055680.1:33778268-33784764[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0058 0.55 11.3 0.3 1 23 88 110 88 110 0.96

2 14 0.00054 0.051 14.5 0.3 1 23 125 147 125 147 0.97

3 14 5.2e-06 0.0005 20.8 1.1 1 23 153 176 153 176 0.98

4 14 1.5 1.4e+02 3.7 1.7 1 23 273 297 273 297 0.92

5 14 0.029 2.7 9.1 2.2 2 23 303 325 303 325 0.95

6 14 0.21 20 6.3 0.1 1 23 516 538 516 538 0.96

7 14 0.001 0.097 13.6 0.4 1 23 547 569 547 569 0.98

8 14 0.0014 0.13 13.2 2.8 1 23 575 598 575 598 0.97

9 14 0.0005 0.048 14.6 3.0 1 23 970 993 970 993 0.97

10 14 0.00054 0.052 14.5 0.1 3 23 1271 1291 1269 1291 0.97

11 14 0.0045 0.44 11.6 2.2 1 23 1359 1383 1359 1383 0.97

12 14 3 2.8e+02 2.7 4.8 1 23 1465 1488 1465 1488 0.94

13 14 0.012 1.2 10.2 0.4 2 23 1539 1560 1538 1560 0.94

14 14 1.5 1.4e+02 3.7 8.2 1 23 1566 1588 1566 1588 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0058	0.55	11.3	0.3	1	23	88	110	88	110	0.96
2	14	0.00054	0.051	14.5	0.3	1	23	125	147	125	147	0.97
3	14	5.2e-06	0.0005	20.8	1.1	1	23	153	176	153	176	0.98
4	14	1.5	1.4e+02	3.7	1.7	1	23	273	297	273	297	0.92
5	14	0.029	2.7	9.1	2.2	2	23	303	325	303	325	0.95
6	14	0.21	20	6.3	0.1	1	23	516	538	516	538	0.96
7	14	0.001	0.097	13.6	0.4	1	23	547	569	547	569	0.98
8	14	0.0014	0.13	13.2	2.8	1	23	575	598	575	598	0.97
9	14	0.0005	0.048	14.6	3.0	1	23	970	993	970	993	0.97
10	14	0.00054	0.052	14.5	0.1	3	23	1271	1291	1269	1291	0.97
11	14	0.0045	0.44	11.6	2.2	1	23	1359	1383	1359	1383	0.97
12	14	3	2.8e+02	2.7	4.8	1	23	1465	1488	1465	1488	0.94
13	14	0.012	1.2	10.2	0.4	2	23	1539	1560	1538	1560	0.94
14	14	1.5	1.4e+02	3.7	8.2	1	23	1566	1588	1566	1588	0.98

Sequence Information

Coding Sequence: atggaaagattGCAGTGCCGTGTTCTCTTCTCGCGAGCCACTTTTATCGTCCTCGGTATCAATCTCGGAAGTGCCTGCTCCAGTCTTGCCTCCAGGGTCCTTGGGAGCCGCTCGCAGAGGCACGTAAATAAGGACGACTGCGGTCAGAACGTAGCGCGAGTTACTGTCAAGGATAGTAACGCCGATCAGGAACACGACAACGAAGCACAAGCGGATGCTGCATCATCGCCATCGTCGAGTATCGAGCTGCCAGAAAGCGCGCACCCCTGCCCCGCCTGTCCGACAGTGCTGCCCAGCTCGAGGGAGCTGACGCACCACCTGCGTGGCCACAACTCGCCCCGCACCAGCACAGACTGCAGCGGCGAGGACGACTATTGCTGCGCGGTATGTAACAAGGTGCTGAGCTCGGCGAGCTCCCTCGACAGGCACGTGCTTGTGCACTCCGGAGAGCGGCCGTTCAAGTGCAAGAACTGCGAGATGGCGTTCACCACGAACGGCAACATGAACAGGCACCTGAAGACCGCGCATCGCTGCTCCCGCTCCCGCTCGCCGGACAGCTGCACCGACTCGGAAGGTAGCAGCGACTTCGAGAGGCCCCCGAGGAAGAAGCTGCGCACAGAGGAGTACAACAACAACGAGATAGCCAAGAGGAACTCGCCGGACATGATCGACAGACAGTCGAGTTCCCCGAGCCTGGGGAACAAGCGGAAGCGCTCGGACTTCCTCAGCGACAACGAGCGCCAGAAGAGGCCCATGATCCTGCTGAACAGGTCCAGGACGGAGCTGAAGTCCCGGCTGAGCGGCAGACACCCAGTGTACAACTGTTCCGTCTGCCGCCGGCATGATTTCGCCACCAGCGCCCTGCTGGAGGCGCACCTCGCGCGCTGCCATCCGCACTTCCCCGCCAAATGCGACGGCTGCAATCTGTCCTTCAAGAACCACCGGGTGCTGAACCTGCACCGTTTCATGGTCCATGTCGCGGATAATTCCAGCGGGAACACGGCGAAGAACCTGAAGAACTCGGTGGTGGGCTTCAACGACCTCACCTTCGTGGACTTCTCGTCGGGCAAGTTCCCGGCGATCGCCAGGGCCGTCTGCGAGCAGTCCTTGCACCGGCCTGCCTCCGGCGAGGTGGCCAAGTTCCAGTGCTCCAAGTGCCTGCGAGCGTTCCCGTGCCGGTTGGCGTTAGACGCCCACGAGGTGGACTGCGGCACGGCCAATCCTCAGGCGAGTATGAGCGACGACAATCAGTCGAGGAGGGACGACTTCTTCGCGGGCCTGGACCTGCAGAACAAGGCCGCGGTGACGGAGGCCAAGGAGGGCAAGGACCTGGCCGACATCCAGAGCATCATATCCGTCACGTCCGGCCCGATACTGCAGAACTTCCCCCGATCGGACGCCAGCACGCCGGAGAACAACATCAAGATCAATCCAAGCACCAGCAGCTCCTCCGGCTCCTCCGGCACGCTCTCCTCCGAGTACCACGAGGAGGAGGCGCAGGACGCGTTCGCGGCTGAGTTCAGGAAGATGAAGCTGAAGGGCGAGTTCCCCTGCCGGCTCTGCACAGCGATATTCCCGAATCTCAGAGCGCTCAAGGGCCACAACAGGGCGCACATGGGAGTCGGTTCCGGGATGCCATACCCCTGCAACATGTGCCCTTATACAAACACGGACAAAGCCACCCTGTTGAGGCACCTGAGGTCCCACAACGGCGACAGGCCCTACGAGTGCTCCCTCTGTAACTACGCGTTCACCACGAAGGCGAACTGCGAGCGCCACGTGCGCAACCGCCACGGCAAGTTGACCAGGGAAGAAATCAAGGCGGTGATGATCTACCATCCGAACGAGGACTCGACGAACGAGAGCGTGGAGAGGAGCTCGCCCAGGGTGATGAAGGACGAGGTGAGGAAGAGCCTGGTCTACCCGCCCGAGCGCGACGAGCTTCAGCTACAGGTGCAGGTGTACTATCCCCCGGTACCCATGGAGGGCCGCGGCGAGATCAGGATAATCGAGGAGGCGAATCTGCACAACAACGGGATGCCGATGCTCAACCATTACGAGAACCAGGGCGAGGCGTCCTCCAGGCCGGTTCAGCCGATCGAGCTGTCGCAACGGAGCCTTGGCGACGGCAAGGACGCCAAGCTGGAGGAGGATCTCGAGTCGAGGTCGTCGGAGGGCAGCGTGTCTCTAGTCAGTGATACCAAATCAGATTCGCACCAAAGAATACAAGCTAGTCCGATGAACCTGAAGAAGGGCCCGAGCGTGTCCGAGAACGCCGACGGCGAGGACGGCCCGCTGGATCTGTCGATGGACGTGCTGGACCTCAGCAAGAAGACCAAGGACAAGGAGGACGCCGATTCCGCCAGCTCGCAGGACCAGCCCGGCACCAGCCAGAAGGTTGTGTACAACGCTACCAGCCAATTGCTGTTGACAGAGGCTCTGCTGAAGGCTGGACAGAGCTCCCAGCCGACGTCCCTGGAGGCCCTCTACGCGAATGCCCACTTGATCTATCGGAACTTCGGGACGTTCTCGGCCAGCGTCGGAGCGAGTATTCTACCGCCTTATATGTTCAACCCTCATGTCTTTGGGCAGGACTTTACGGTGAAAGAGAGACTGCAGAAGGAGCTGGTGAGGGGCCTACAGTTGACCAGTGGTGGGACCTTGGTGGAGCCCACTATCGGTGGAACGGAATTCGCTGCGTTTGCGCAAGCTAGGGACATGAGCCTGTCTAGCGACGCGCGGAGGGAGTACGCGAAGATGATCGCGTCGACGGTTTCCAGCAAGGTTCTGTCGATTCGCGACAAGCCGGAGAATCATATGTCATCGTCGAACTCCGTGAAGATGGTGATCAAGAACGGCGTGCTGATGCCCAAACAGAAGCAACGGAGATACAGGACCGAGAGACCGTTCACGTGCGAGCATTGCTCCGCGAGATTCACCCTGAGGAGCAACATGGAGAGACACATCAAGCAGCAGCATCCTCAGTTCTGGAGCCAGAGGCCCAGAGGGGGGCATTCCACCAGAGGGAGGCCACCGTCCGGCCACGCGGCGGTGTTGCACAGTCTTGAGCAGACTGCGTCTCGGGTGACGCAATCCTACCAAAGTATCCTGCCTAAGGCGAAGCAGTCGGCGAGCTCCGAGTACACAAAGTACCCCATCTCGCATCAAGTGAAGTACGCCATTCTGGCGCAGCAGTTGAAGGCCAACAAGGTCGAAGAGAACGACTCGGAGGAGGAGCTGGTGATCGACGAGGATTCGGGAGAGAAAGATCCACAGGAATCTCAGGAGCAGAAGAAAGAAAGCTCCAGTTTGCTGAGGGAGCAGTTGGAGGGCTCGGAATCTGCCAAGGAGCCTGTTTTGAAGGACGAGGCTGAGGAGTCCACAAAGGATGCGACGGAATCGATTCACGCCGAGTCGGCGAAGGACGAGGACGCTGCTGAAGAGACGAAGAGCTCGGATACTGAGAGGCCCGCGGAGGCAGACGACAGCAGTGAGAATGGGGAGGATACAGAGTTCAAGACAGAGCTGGATGACAACAAGTCTGAGAAGATGGAGGATGGCACAACAGATCTGGCAAGTGTCTCTGAATTGCTGGACAATGCTACTCAACAGTATCAGCAATTCCAGCCGCAGTATCTGAGCGACGAAGAAGGTTTGGTCGCGTCCCACAGCGACTGCAACAACTCCGGCAGCGACGAGAAATCCGACTCTGTAAACTCGTTGAACTCCGTCACCACGTCgtccaagaagaagaagaaaacaaagaaaaagaagaaatctGCTTACTCCATGGCGCCTAATCGTGTGATCTGCCCGTACTGCCAGCGACCGTTCCCCTGGACATCGTCCCTGAGGAGACACATCTTAACTCACACTGGACAGAAGCCCTACCGGTGCATTCATTGCTCGCTCCTCTTCACCACCAAGTCCAACTGCGACCGTCATCTGATGCGAAAGCACAAAGCCAACCTGAACAAGATCCGCAGAATGAGGAACTCCTCCTCTCCCGACTCCCAAAGAGTGATCAGCAACAACGGCTCCTCCTTCTCCATGAGGAACGTGCCTGAGAGACCGTACAAGTGCAACCAGTGCCCAAGCTCGACCTTCTCCACCTTAGGCAACCTGAAGAAGCATCGCTCGACGAAGCACGCGCGCAAGCTGAAGTCCAGGTCCGGCACTCCGTCCAGCGAGCCTCAGAACAGCCCTCGCGAGTGCCCGAAGCAAGAGCAGAGCGACTACGATAGCCAGTCTTCGAGCGTGTCGGAGGGCATGGACACCTCCTCGGTCACTGGAATCCCCAAATCGAACTCCAACACCTCGACGTCCACCAACGATACCCCTAGATCCAGAAGACCCTCCCCAAGGTCGTCGCCAGGACCCAGCGACGTGCCCTTCAAGTGCCACCTCTGCGACTGCGGTTTCGCCGAGCGACAGGACTGTCTCGAGCACATCAAGGTGAACCACAAGAGGTCGTACGAGATGCTGGTGGCGAAGGGTGCGCTGGACATGGACATCGACACCGCGGAGGACCAGCAACAGCCTCCTGCGCCGCAGCATCCCAGCGATGGAGAAGAGAAGAGAGGGCGCTTCCCTGACTACAGTAACAGGAAGGTGGTTTGCGCGTTCTGCATGAGGCGATTCTGGTCCGCCGAGGACCTGCGCCGCCACATGAGGACGCACACGGGGGAGAGGCCGTTCTCCTGCGACATATGCTGCAGGAGATTCACCCTGAAGCACAGCATGCTGCGCCACAGGAAGAAGCACGAGTCCATCGACTCGACCATGTACGTGGGCACCAGCGGGGACGAGGAGAACTCGCCCACGCAGCCGCCCACCATCACGCCCCGGAGCCAACAGCAACCACCCGCTTTAGTGGCGGCCAACTCTGGCAATCCCAGGGTCCAGGACAGAATCTCGTTGCCCACCGTTGCCCCGGTTGCCACCGGGGACGCCGCGCCCAGCGGACTCGTGGGATTCAATCCCTACGAGAAGCTGACTACCTTGACTGGAGAGCTGGCCAGCATCCCCCAGAACGTGAACCCAGAGGCTACCGAGAGCGCGGACAACGACTTGATCTCCAATCTTCTGGGGATACCGGACAAGAGCTTCATCGACAGGGTCCTCCAAGCATCGGCCGACGACGCCGCCAAGCTGTTGGGGGTGAAACACAGCCACGAGTGA
Protein Sequence: MERLQCRVLFSRATFIVLGINLGSACSSLASRVLGSRSQRHVNKDDCGQNVARVTVKDSNADQEHDNEAQADAASSPSSSIELPESAHPCPACPTVLPSSRELTHHLRGHNSPRTSTDCSGEDDYCCAVCNKVLSSASSLDRHVLVHSGERPFKCKNCEMAFTTNGNMNRHLKTAHRCSRSRSPDSCTDSEGSSDFERPPRKKLRTEEYNNNEIAKRNSPDMIDRQSSSPSLGNKRKRSDFLSDNERQKRPMILLNRSRTELKSRLSGRHPVYNCSVCRRHDFATSALLEAHLARCHPHFPAKCDGCNLSFKNHRVLNLHRFMVHVADNSSGNTAKNLKNSVVGFNDLTFVDFSSGKFPAIARAVCEQSLHRPASGEVAKFQCSKCLRAFPCRLALDAHEVDCGTANPQASMSDDNQSRRDDFFAGLDLQNKAAVTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPENNIKINPSTSSSSGSSGTLSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHMGVGSGMPYPCNMCPYTNTDKATLLRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREEIKAVMIYHPNEDSTNESVERSSPRVMKDEVRKSLVYPPERDELQLQVQVYYPPVPMEGRGEIRIIEEANLHNNGMPMLNHYENQGEASSRPVQPIELSQRSLGDGKDAKLEEDLESRSSEGSVSLVSDTKSDSHQRIQASPMNLKKGPSVSENADGEDGPLDLSMDVLDLSKKTKDKEDADSASSQDQPGTSQKVVYNATSQLLLTEALLKAGQSSQPTSLEALYANAHLIYRNFGTFSASVGASILPPYMFNPHVFGQDFTVKERLQKELVRGLQLTSGGTLVEPTIGGTEFAAFAQARDMSLSSDARREYAKMIASTVSSKVLSIRDKPENHMSSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRPRGGHSTRGRPPSGHAAVLHSLEQTASRVTQSYQSILPKAKQSASSEYTKYPISHQVKYAILAQQLKANKVEENDSEEELVIDEDSGEKDPQESQEQKKESSSLLREQLEGSESAKEPVLKDEAEESTKDATESIHAESAKDEDAAEETKSSDTERPAEADDSSENGEDTEFKTELDDNKSEKMEDGTTDLASVSELLDNATQQYQQFQPQYLSDEEGLVASHSDCNNSGSDEKSDSVNSLNSVTTSSKKKKKTKKKKKSAYSMAPNRVICPYCQRPFPWTSSLRRHILTHTGQKPYRCIHCSLLFTTKSNCDRHLMRKHKANLNKIRRMRNSSSPDSQRVISNNGSSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARKLKSRSGTPSSEPQNSPRECPKQEQSDYDSQSSSVSEGMDTSSVTGIPKSNSNTSTSTNDTPRSRRPSPRSSPGPSDVPFKCHLCDCGFAERQDCLEHIKVNHKRSYEMLVAKGALDMDIDTAEDQQQPPAPQHPSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENSPTQPPTITPRSQQQPPALVAANSGNPRVQDRISLPTVAPVATGDAAPSGLVGFNPYEKLTTLTGELASIPQNVNPEATESADNDLISNLLGIPDKSFIDRVLQASADDAAKLLGVKHSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00625690;
90% Identity: -
80% Identity: -